Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GEMM_RNA_motif in Shewanella sp MR-4

Properties
Regulator type: RNA regulatory element
Name: GEMM_RNA_motif
RFAM: RF01051
Regulation mode:
Biological process: Second messenger response
Effector: Cyclic diguanylate
Regulog: GEMM_RNA_motif - Shewanellaceae
Under regulation:
- Genes 3
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -196
Score: 76.2
Sequence: TTATTGTGAAAGGCA...
Locus tag: Shewmr4_2805
Name: null
Funciton: Chitinase (EC 3.2.1.14)
Chitinase (EC 3.2.1.14)

Position: -176
Score: 55.2
Sequence: ACTGACGAACAGGCA...
Locus tag: Shewmr4_3376
Name: null
Funciton: Hypothetical secreted protein
Hypothetical secreted protein

Position: -222
Score: 72.8
Sequence: CCACCGTATTTGGCA...
Locus tag: Shewmr4_3027
Name: cbp
Funciton: Chitin and N-acetylglucosamine-binding protein
cbp
Chitin and N-acetylglucosamine-binding protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD