Regulog LexA2 - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Genome | Genes | Operons |
|---|---|---|
| Azotobacter vinelandii AvOP | ||
| Pseudomonas aeruginosa PAO1 | ||
| Pseudomonas entomophila L48 | 4 | 1 |
| Pseudomonas fluorescens Pf-5 | 4 | 1 |
| Pseudomonas mendocina ymp | ||
| Pseudomonas putida KT2440 | 5 | 2 |
| Pseudomonas stutzeri A1501 | ||
| Pseudomonas syringae pv. tomato str. DC3000 | 4 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| PA2381 |
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Gene: PA2381: hypothetical protein |
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*
Pseudomonas putida KT2440 Site: position = -85 score = 6.7227 sequence = GAGTACAAATGTGCTC Gene: PP3901: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||||
| lexA2 |
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*
Pseudomonas entomophila L48 Site: position = -17 score = 6.79756 sequence = GAGTACAAATGTACTC Gene: PSEEN2412: SOS-response repressor and protease LexA (EC 3.4.21.88) |
*
Pseudomonas fluorescens Pf-5 Site: position = -17 score = 6.79756 sequence = GAGTACAAATGTACTC Gene: PFL_3700: SOS-response repressor and protease LexA (EC 3.4.21.88) |
|
*
Pseudomonas putida KT2440 Site: position = -17 score = 6.7227 sequence = GAGTACAAATGTGCTC Gene: PP3116: SOS-response repressor and protease LexA (EC 3.4.21.88) |
|
*
Pseudomonas syringae pv. tomato str. DC3000 Site: position = -17 score = 6.79756 sequence = GAGTACAAATGTACTC Gene: PSPTO2792: SOS-response repressor and protease LexA (EC 3.4.21.88) |
SOS-response repressor and protease LexA (EC 3.4.21.88) |
| imuA |
|
Gene: PA0671: RecA/RadA recombinase |
Gene: PSEEN2413: RecA/RadA recombinase |
Gene: PFL_3699: RecA/RadA recombinase |
Gene: Pmen_1936: RecA/RadA recombinase |
Gene: PP3117: RecA/RadA recombinase |
Gene: PST_2344: RecA/RadA recombinase |
Gene: PSPTO2793: RecA/RadA recombinase |
RecA/RadA recombinase |
| imuB |
|
Gene: PA0670: DNA polymerase-like protein PA0670 |
Gene: PSEEN2414: DNA polymerase-like protein PA0670 |
Gene: PFL_3698: DNA polymerase-like protein PA0670 |
Gene: Pmen_1935: DNA polymerase-like protein PA0670 |
Gene: PP3118: DNA polymerase-like protein PA0670 |
Gene: PST_2346: DNA polymerase-like protein PA0670 |
Gene: PSPTO2794: DNA polymerase-like protein PA0670 |
DNA polymerase-like protein PA0670 |
| dnaE2 |
|
Gene: PA0669: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: PSEEN2415: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: PFL_3697: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: Pmen_1934: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: PP_3119: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: PST_2347: DNA polymerase III alpha subunit (EC 2.7.7.7) |
Gene: PSPTO2795: DNA polymerase III alpha subunit (EC 2.7.7.7) |
DNA polymerase III alpha subunit (EC 2.7.7.7) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |