Regulog ArgR - Chlorobiales
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Chlorobi |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chlorobiales
- By trascription factor - ArgR
- By TF family - ArgR
- By effector - Arginine
- By pathway - Arginine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Chlorobaculum parvum NCIB 8327 | 7 | 1 |
| Chlorobium chlorochromatii CaD3 | 6 | 1 |
| Chlorobium ferrooxidans DSM 13031 | 6 | 1 |
| Chlorobium limicola DSM 245 | 7 | 1 |
| Chlorobium phaeobacteroides BS1 | 6 | 1 |
| Chlorobium phaeobacteroides DSM 266 | 6 | 1 |
| Chloroherpeton thalassium ATCC 35110 | 6 | 1 |
| Pelodictyon luteolum DSM 273 | 7 | 1 |
| Pelodictyon phaeoclathratiforme BU-1 | 6 | 1 |
| Prosthecochloris aestuarii DSM 271 | 7 | 2 |
| Prosthecochloris vibrioformis DSM 265 | 7 | 1 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| argC |
*
Chlorobaculum parvum NCIB 8327 Site: position = -39 score = 5.47936 sequence = TGAATATTTATTCA Gene: Cpar_0991: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Chlorobium chlorochromatii CaD3 Site: position = -146 score = 5.47936 sequence = TGAATATTTATTCA Gene: Cag_0772: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Chlorobium ferrooxidans DSM 13031 Site: position = -119 score = 3.6991 sequence = AAAAAATATTTTCA Site: position = -63 score = 5.22224 sequence = TGGATATTTATTCA Gene: CferDRAFT_1492: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Chlorobium limicola DSM 245 Site: position = -151 score = 5.55172 sequence = TGAATATATATTCA Gene: Clim_1245: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Chlorobium phaeobacteroides BS1 Site: position = -134 score = 5.03965 sequence = TGAATATTAATTCA Site: position = -115 score = 5.18052 sequence = AGAATATATATTCA Gene: Cphamn1_1337: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Chlorobium phaeobacteroides DSM 266 Site: position = -127 score = 5.22224 sequence = TGGATATTTATTCA Site: position = -24 score = 4.31842 sequence = TGAATTTATTTTCG Gene: Cpha266_1320: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Chloroherpeton thalassium ATCC 35110 Site: position = -19 score = 5.06309 sequence = TGAATATTTATTCG Site: position = -37 score = 3.92778 sequence = ACAAAATATTTTCA Gene: Ctha_2277: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Pelodictyon luteolum DSM 273 Site: position = -34 score = 5.22224 sequence = TGGATATTTATTCA Gene: Plut_1049: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Pelodictyon phaeoclathratiforme BU-1 Site: position = -5 score = 3.72999 sequence = AGACAATGTATTCA Gene: Ppha_1383: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Prosthecochloris aestuarii DSM 271 Site: position = -130 score = 5.08269 sequence = TGCATAAATATTCA Site: position = -63 score = 4.41134 sequence = TGGATATTAATTCT Gene: Paes_1076: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
*
Prosthecochloris vibrioformis DSM 265 Site: position = -51 score = 3.67686 sequence = GGGTTATATATTCG Site: position = -31 score = 5.22224 sequence = TGGATAAATATTCA Gene: Cvib_0877: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) |
| argJ |
Gene: Cpar_0990: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Cag_0773: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: CferDRAFT_1491: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Clim_1246: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Cphamn1_1336: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Cpha266_1321: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Ctha_2278: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Plut_1048: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Ppha_1382: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Paes_1075: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Gene: Cvib_0878: Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
Glutamate N-acetyltransferase (EC 2.3.1.35) / N-acetylglutamate synthase (EC 2.3.1.1) |
| argB |
Gene: Cpar_0989: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Cag_0774: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: CferDRAFT_1490: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Clim_1247: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Cphamn1_1335: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Cpha266_1322: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Ctha_2279: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Plut_1047: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Ppha_1381: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Paes_1074: Acetylglutamate kinase (EC 2.7.2.8) |
Gene: Cvib_0879: Acetylglutamate kinase (EC 2.7.2.8) |
Acetylglutamate kinase (EC 2.7.2.8) |
| argF |
Gene: Cpar_0988: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Cag_0775: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: CferDRAFT_1489: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Clim_1248: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Cphamn1_1334: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Cpha266_1323: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Ctha_2280: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Plut_1046: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Ppha_1380: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Paes_1073: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Gene: Cvib_0880: Ornithine carbamoyltransferase (EC 2.1.3.3) |
Ornithine carbamoyltransferase (EC 2.1.3.3) |
| argR |
Gene: Cpar_0987: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Cag_0776: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: CferDRAFT_1488: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Clim_1249: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Cphamn1_1333: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Cpha266_1324: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Ctha_2281: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Plut_1045: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Ppha_1379: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Paes_1072: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Gene: Cvib_0881: Arginine metabolism transcriptional regulator ArgR, ArgR family |
Arginine metabolism transcriptional regulator ArgR, ArgR family |
| argG |
Gene: Cpar_0986: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Cag_0777: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: CferDRAFT_1487: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Clim_1250: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Cphamn1_1332: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Cpha266_1325: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Ctha_2282: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Plut_1044: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Ppha_1378: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Paes_1071: Argininosuccinate synthase (EC 6.3.4.5) |
Gene: Cvib_0882: Argininosuccinate synthase (EC 6.3.4.5) |
Argininosuccinate synthase (EC 6.3.4.5) |
| argH |
Gene: Cpar_0985: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Cag_0730: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: CferDRAFT_1461: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Clim_1251: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Cphamn1_1327: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Cpha266_1327: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Ctha_2452: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Plut_1043: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Ppha_1367: Argininosuccinate lyase (EC 4.3.2.1) |
*
Prosthecochloris aestuarii DSM 271 Site: position = -287 score = 4.10378 sequence = TGAAGAAATAAGCA Gene: Paes_1047: Argininosuccinate lyase (EC 4.3.2.1) |
Gene: Cvib_0883: Argininosuccinate lyase (EC 4.3.2.1) |
Argininosuccinate lyase (EC 4.3.2.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |