Regulog MOCO_RNA_motif - Oceanospirillales/Alteromonadales

Properties
Regulator type:	RNA regulatory element
Name:	MOCO_RNA_motif
RFAM:	RF01055
Regulation mode:
Biological process:	Molybdopterin biosynthesis; Molybdenum homeostasis
Effector:	Molybdenum
Phylum:	Proteobacteri/Gamma

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By RNA motif - MOCO_RNA_motif
By effector - Molybdenum
By pathway - Molybdopterin biosynthesis
By pathway - Molybdenum homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Reinekea sp. MED297	9	1
Marinobacter aqueolei
Marinobacter sp. ELB17
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901	2	1
Cellvibrio japonicus Ueda107

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
moaA	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1 Gene: Mmwyl1_1315: Molybdenum cofactor biosynthesis protein MoaA	Oceanobacter sp. RED65	Oceanospirillum sp. MED92 Gene: MED92_18358: Molybdenum cofactor biosynthesis protein MoaA	* Reinekea sp. MED297 Site: position = -120 score = 77.51 sequence = ATTAAGCAATACACC... Gene: MED297_14620: Molybdenum cofactor biosynthesis protein MoaA	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	* Teredinibacter turnerae T7901 Site: position = -127 score = 65.6 sequence = AACTTTAATTTCGCC... Gene: TERTU_3185: Molybdenum cofactor biosynthesis protein MoaA	Cellvibrio japonicus Ueda107 Gene: CJA_0321: Molybdenum cofactor biosynthesis protein MoaA	Molybdenum cofactor biosynthesis protein MoaA
mobA	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297 Gene: MED297_14625: Molybdopterin-guanine dinucleotide biosynthesis protein MobA	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Molybdopterin-guanine dinucleotide biosynthesis protein MobA
moaB	Alcanivorax borkumensis SK2 Gene: ABO_2383: Molybdenum cofactor biosynthesis protein MoaB	Chromohalobacter salexigens DSM 3043 Gene: Csal_1919: Molybdenum cofactor biosynthesis protein MoaB	Hahella chejuensis KCTC 2396 Gene: HCH_04900: Molybdenum cofactor biosynthesis protein MoaB	Marinomonas sp. MWYL1 Gene: Mmwyl1_1314: Molybdenum cofactor biosynthesis protein MoaB	Oceanobacter sp. RED65 Gene: RED65_04974: Molybdenum cofactor biosynthesis protein MoaB	Oceanospirillum sp. MED92 Gene: MED92_18353: Molybdenum cofactor biosynthesis protein MoaB	Reinekea sp. MED297 Gene: MED297_14630: Molybdenum cofactor biosynthesis protein MoaB	Marinobacter aqueolei Gene: Maqu_0480: Molybdenum cofactor biosynthesis protein MoaB	Marinobacter sp. ELB17 Gene: MELB17_20921: Molybdenum cofactor biosynthesis protein MoaB	Saccharophagus degradans 2-40 Gene: Sde_2358: Molybdenum cofactor biosynthesis protein MoaB	Teredinibacter turnerae T7901 Gene: TERTU_3186: Molybdenum cofactor biosynthesis protein MoaB	Cellvibrio japonicus Ueda107 Gene: CJA_0320: Molybdenum cofactor biosynthesis protein MoaB	Molybdenum cofactor biosynthesis protein MoaB
moaC	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65 Gene: RED65_04969: Molybdenum cofactor biosynthesis protein MoaC	Oceanospirillum sp. MED92 Gene: MED92_18338: Molybdenum cofactor biosynthesis protein MoaC	Reinekea sp. MED297 Gene: MED297_14635: Molybdenum cofactor biosynthesis protein MoaC	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Molybdenum cofactor biosynthesis protein MoaC
moaD	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65 Gene: RED65_04964: Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1	Oceanospirillum sp. MED92 Gene: MED92_18333: Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1	Reinekea sp. MED297 Gene: MED297_14640: Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1	Marinobacter aqueolei Gene: Maqu_0478: Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1	Marinobacter sp. ELB17 Gene: MELB17_20931: Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Molybdenum cofactor biosynthesis protein MoaD; Molybdopterin converting factor subunit 1
moaE	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65 Gene: RED65_04959: Molybdenum cofactor biosynthesis protein MoaE	Oceanospirillum sp. MED92	Reinekea sp. MED297 Gene: MED297_14645: Molybdenum cofactor biosynthesis protein MoaE	Marinobacter aqueolei Gene: Maqu_0477: Molybdenum cofactor biosynthesis protein MoaE	Marinobacter sp. ELB17 Gene: MELB17_20936: Molybdenum cofactor biosynthesis protein MoaE	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Molybdenum cofactor biosynthesis protein MoaE
modA	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297 Gene: MED297_14650: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901 Gene: TERTU_1534: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Cellvibrio japonicus Ueda107	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
modB	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297 Gene: MED297_14655: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901 Gene: TERTU_1533: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Cellvibrio japonicus Ueda107	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
modC	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297 Gene: MED297_14660: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901 Gene: TERTU_1532: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Cellvibrio japonicus Ueda107	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MOCO_RNA_motif - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --