Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog MOCO_RNA_motif - Alteromonadales

Properties
Regulator type: RNA regulatory element
Name: MOCO_RNA_motif
RFAM: RF01055
Regulation mode:
Biological process: Molybdenum homeostasis; Molybdopterin biosynthesis
Effector: Molybdenum
Phylum: Proteobacteria/Gamma
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Alteromonadales bacterium TW-7
Alteromonas macleodii 'Deep ecotype' 6 1
Glaciecola sp. HTCC2999
Colwellia psychrerythraea 34H 9 1
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Pseudoalteromonas atlantica T6c 8 1
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas tunicata D2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
moaA
 
Alteromonadales bacterium TW-7

Gene: ATW7_14041: Molybdenum cofactor biosynthesis protein MoaA
*
Alteromonas macleodii 'Deep ecotype'

Site:
position = -274
score = 76.3
sequence = AAGGTAACAAAAACT...

Gene: MADE_03862: Molybdenum cofactor biosynthesis protein MoaA
 
Glaciecola sp. HTCC2999
*
Colwellia psychrerythraea 34H

Site:
position = -178
score = 52.48
sequence = TTATTTTATTACACC...

Gene: CPS_4633: Molybdenum cofactor biosynthesis protein MoaA
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
*
Pseudoalteromonas atlantica T6c

Site:
position = -177
score = 71.22
sequence = ACAGGTGGTTTAACT...

Gene: Patl_2160: Molybdenum cofactor biosynthesis protein MoaA
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum cofactor biosynthesis protein MoaA
mobB
 
Alteromonadales bacterium TW-7

Gene: ATW7_14036: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_03861: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4634: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2159: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdopterin-guanine dinucleotide biosynthesis protein MobB
moaB
 
Alteromonadales bacterium TW-7

Gene: ATW7_14031: Molybdenum cofactor biosynthesis protein MoaB
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01047: Molybdenum cofactor biosynthesis protein MoaB

Gene: MADE_03860: Molybdenum cofactor biosynthesis protein MoaB
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4635: Molybdenum cofactor biosynthesis protein MoaB
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2158: Molybdenum cofactor biosynthesis protein MoaB
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum cofactor biosynthesis protein MoaB
moaC
 
Alteromonadales bacterium TW-7

Gene: ATW7_14026: Molybdenum cofactor biosynthesis protein MoaC
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_03859: Molybdenum cofactor biosynthesis protein MoaC

Gene: MADE_01048: Molybdenum cofactor biosynthesis protein MoaC
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4636: Molybdenum cofactor biosynthesis protein MoaC
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2157: Molybdenum cofactor biosynthesis protein MoaC
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum cofactor biosynthesis protein MoaC
moaD
 
Alteromonadales bacterium TW-7

Gene: ATW7_14021: Molybdenum cofactor biosynthesis protein MoaD
 
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_03858: Molybdenum cofactor biosynthesis protein MoaD
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4637: Molybdenum cofactor biosynthesis protein MoaD
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2156: Molybdenum cofactor biosynthesis protein MoaD
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum cofactor biosynthesis protein MoaD
moaE
 
Alteromonadales bacterium TW-7

Gene: ATW7_14016: Molybdenum cofactor biosynthesis protein MoaE
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_03857: Molybdenum cofactor biosynthesis protein MoaE

Gene: MADE_01050: Molybdenum cofactor biosynthesis protein MoaE
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4638: Molybdenum cofactor biosynthesis protein MoaE
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2155: Molybdenum cofactor biosynthesis protein MoaE
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum cofactor biosynthesis protein MoaE
modA
 
Alteromonadales bacterium TW-7
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01051: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)

Gene: MADE_03851: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4639: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2154: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
modB
 
Alteromonadales bacterium TW-7
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01052: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)

Gene: MADE_03850: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4640: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c

Gene: Patl_2153: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
modC
 
Alteromonadales bacterium TW-7
 2
Alteromonas macleodii 'Deep ecotype'

Gene: MADE_01053: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)

Gene: MADE_03849: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
 
Glaciecola sp. HTCC2999
 
Colwellia psychrerythraea 34H

Gene: CPS_4641: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
 
Idiomarina baltica OS145
 
Idiomarina loihiensis L2TR
 
Pseudoalteromonas atlantica T6c
 
Pseudoalteromonas haloplanktis TAC125
 
Pseudoalteromonas tunicata D2
Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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