Regulog MOCO_RNA_motif - Alteromonadales

Properties
Regulator type:	RNA regulatory element
Name:	MOCO_RNA_motif
RFAM:	RF01055
Regulation mode:
Biological process:	Molybdenum homeostasis; Molybdopterin biosynthesis
Effector:	Molybdenum
Phylum:	Proteobacteria/Gamma

Member of regulog collections

By taxonomy - Alteromonadales
By RNA motif - MOCO_RNA_motif
By effector - Molybdenum
By pathway - Molybdenum homeostasis
By pathway - Molybdopterin biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Alteromonadales bacterium TW-7
Alteromonas macleodii 'Deep ecotype'	6	1
Glaciecola sp. HTCC2999
Colwellia psychrerythraea 34H	9	1
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Pseudoalteromonas atlantica T6c	8	1
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas tunicata D2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
moaA	Alteromonadales bacterium TW-7 Gene: ATW7_14041: Molybdenum cofactor biosynthesis protein MoaA	* Alteromonas macleodii 'Deep ecotype' Site: position = -274 score = 76.3 sequence = AAGGTAACAAAAACT... Gene: MADE_03862: Molybdenum cofactor biosynthesis protein MoaA	Glaciecola sp. HTCC2999	* Colwellia psychrerythraea 34H Site: position = -178 score = 52.48 sequence = TTATTTTATTACACC... Gene: CPS_4633: Molybdenum cofactor biosynthesis protein MoaA	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	* Pseudoalteromonas atlantica T6c Site: position = -177 score = 71.22 sequence = ACAGGTGGTTTAACT... Gene: Patl_2160: Molybdenum cofactor biosynthesis protein MoaA	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum cofactor biosynthesis protein MoaA
mobB	Alteromonadales bacterium TW-7 Gene: ATW7_14036: Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Alteromonas macleodii 'Deep ecotype' Gene: MADE_03861: Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4634: Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2159: Molybdopterin-guanine dinucleotide biosynthesis protein MobB	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdopterin-guanine dinucleotide biosynthesis protein MobB
moaB	Alteromonadales bacterium TW-7 Gene: ATW7_14031: Molybdenum cofactor biosynthesis protein MoaB	2 Alteromonas macleodii 'Deep ecotype' Gene: MADE_01047: Molybdenum cofactor biosynthesis protein MoaB Gene: MADE_03860: Molybdenum cofactor biosynthesis protein MoaB	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4635: Molybdenum cofactor biosynthesis protein MoaB	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2158: Molybdenum cofactor biosynthesis protein MoaB	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum cofactor biosynthesis protein MoaB
moaC	Alteromonadales bacterium TW-7 Gene: ATW7_14026: Molybdenum cofactor biosynthesis protein MoaC	2 Alteromonas macleodii 'Deep ecotype' Gene: MADE_03859: Molybdenum cofactor biosynthesis protein MoaC Gene: MADE_01048: Molybdenum cofactor biosynthesis protein MoaC	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4636: Molybdenum cofactor biosynthesis protein MoaC	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2157: Molybdenum cofactor biosynthesis protein MoaC	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum cofactor biosynthesis protein MoaC
moaD	Alteromonadales bacterium TW-7 Gene: ATW7_14021: Molybdenum cofactor biosynthesis protein MoaD	Alteromonas macleodii 'Deep ecotype' Gene: MADE_03858: Molybdenum cofactor biosynthesis protein MoaD	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4637: Molybdenum cofactor biosynthesis protein MoaD	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2156: Molybdenum cofactor biosynthesis protein MoaD	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum cofactor biosynthesis protein MoaD
moaE	Alteromonadales bacterium TW-7 Gene: ATW7_14016: Molybdenum cofactor biosynthesis protein MoaE	2 Alteromonas macleodii 'Deep ecotype' Gene: MADE_03857: Molybdenum cofactor biosynthesis protein MoaE Gene: MADE_01050: Molybdenum cofactor biosynthesis protein MoaE	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4638: Molybdenum cofactor biosynthesis protein MoaE	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2155: Molybdenum cofactor biosynthesis protein MoaE	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum cofactor biosynthesis protein MoaE
modA	Alteromonadales bacterium TW-7	2 Alteromonas macleodii 'Deep ecotype' Gene: MADE_01051: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) Gene: MADE_03851: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4639: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2154: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
modB	Alteromonadales bacterium TW-7	2 Alteromonas macleodii 'Deep ecotype' Gene: MADE_01052: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) Gene: MADE_03850: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4640: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_2153: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
modC	Alteromonadales bacterium TW-7	2 Alteromonas macleodii 'Deep ecotype' Gene: MADE_01053: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) Gene: MADE_03849: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Glaciecola sp. HTCC2999	Colwellia psychrerythraea 34H Gene: CPS_4641: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MOCO_RNA_motif - Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --