Regulog Chvl - Rhodobacterales

Properties
Regulator type:	Transcription factor
Regulator family:	OmpR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 10 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - OmpR

Statistics of regulated genes
Genome	Genes	Operons
Hyphomonas neptunium ATCC 15444
Jannaschia sp. CCS1
Loktanella vestfoldensis SKA53
Oceanicaulis alexandrii HTCC2633
Oceanicola batsensis HTCC2597	7	1
Oceanicola granulosus HTCC2516	7	1
Paracoccus denitrificans PD1222
Rhodobacter sphaeroides 2.4.1	6	1
Rhodobacterales bacterium HTCC2654	7	1
Roseobacter sp. MED193	8	1
Roseovarius nubinhibens ISM	7	1
Roseovarius sp. 217
Silicibacter TM1040	7	1
Silicibacter pomeroyi DSS-3	7	1
Sulfitobacter sp. EE-36	7	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
chvI	Hyphomonas neptunium ATCC 15444 Gene: HNE_1408: DNA-binding response regulator ChvI	Jannaschia sp. CCS1 Gene: Jann_0536: DNA-binding response regulator ChvI	Loktanella vestfoldensis SKA53 Gene: SKA53_13143: DNA-binding response regulator ChvI	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_11223: DNA-binding response regulator ChvI	* Oceanicola batsensis HTCC2597 Site: position = -91 score = 7.36484 sequence = GATTCG-(12)-GATTGT Gene: OB2597_10164: DNA-binding response regulator ChvI	* Oceanicola granulosus HTCC2516 Site: position = -94 score = 8.21949 sequence = GATTCG-(11)-GATTCG Gene: OG2516_08703: DNA-binding response regulator ChvI	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -81 score = 7.33495 sequence = GATTCG-(12)-GATTCC Gene: RSP_1681: DNA-binding response regulator ChvI	* Rhodobacterales bacterium HTCC2654 Site: position = -72 score = 7.37352 sequence = GATTCT-(13)-GATTCT Site: position = -90 score = 7.90228 sequence = GATTCG-(12)-GATTCT Gene: RB2654_15916: DNA-binding response regulator ChvI	* Roseobacter sp. MED193 Site: position = -93 score = 8.21949 sequence = GATTCG-(12)-GATTCG Gene: MED193_16484: DNA-binding response regulator ChvI	* Roseovarius nubinhibens ISM Site: position = -106 score = 7.26244 sequence = GAGTCG-(12)-GATTCG Gene: ISM_13540: DNA-binding response regulator ChvI	Roseovarius sp. 217 Gene: ROS217_04090: DNA-binding response regulator ChvI	* Silicibacter TM1040 Site: position = -89 score = 8.21949 sequence = GATTCG-(13)-GATTCG Gene: TM1040_2441: DNA-binding response regulator ChvI	* Silicibacter pomeroyi DSS-3 Site: position = -91 score = 8.21949 sequence = GATTCG-(12)-GATTCG Gene: SPO0710: DNA-binding response regulator ChvI	* Sulfitobacter sp. EE-36 Site: position = -95 score = 8.21949 sequence = GATTCG-(12)-GATTCG Gene: EE36_04883: DNA-binding response regulator ChvI	DNA-binding response regulator ChvI
MED193_16489	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193 Gene: MED193_16489: Sensor histidine kinase ChvG (EC 2.7.3.-)	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Sensor histidine kinase ChvG (EC 2.7.3.-)
chvG	Hyphomonas neptunium ATCC 15444 Gene: HNE_1404: Sensor histidine kinase ChvG (EC 2.7.3.-)	Jannaschia sp. CCS1 Gene: Jann_0537: Sensor histidine kinase ChvG (EC 2.7.3.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_13148: Sensor histidine kinase ChvG (EC 2.7.3.-)	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_11218: Sensor histidine kinase ChvG (EC 2.7.3.-)	Oceanicola batsensis HTCC2597 Gene: OB2597_10159: Sensor histidine kinase ChvG (EC 2.7.3.-)	Oceanicola granulosus HTCC2516 Gene: OG2516_08698: Sensor histidine kinase ChvG (EC 2.7.3.-)	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1 Gene: RSP_1682: Sensor histidine kinase ChvG (EC 2.7.3.-)	Rhodobacterales bacterium HTCC2654 Gene: RB2654_15921: Sensor histidine kinase ChvG (EC 2.7.3.-)	Roseobacter sp. MED193 Gene: MED193_16494: Sensor histidine kinase ChvG (EC 2.7.3.-)	Roseovarius nubinhibens ISM Gene: ISM_13545: Sensor histidine kinase ChvG (EC 2.7.3.-)	Roseovarius sp. 217 Gene: ROS217_04085: Sensor histidine kinase ChvG (EC 2.7.3.-)	Silicibacter TM1040 Gene: TM1040_2440: Sensor histidine kinase ChvG (EC 2.7.3.-)	Silicibacter pomeroyi DSS-3 Gene: SPO0711: Sensor histidine kinase ChvG (EC 2.7.3.-)	Sulfitobacter sp. EE-36 Gene: EE36_04878: Sensor histidine kinase ChvG (EC 2.7.3.-)	Sensor histidine kinase ChvG (EC 2.7.3.-)
Jann_0538	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0538: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Loktanella vestfoldensis SKA53 Gene: SKA53_13153: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597 Gene: OB2597_10154: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Oceanicola granulosus HTCC2516 Gene: OG2516_08693: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Paracoccus denitrificans PD1222 Gene: Pden_2851: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Rhodobacter sphaeroides 2.4.1 Gene: RSP_1683: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Rhodobacterales bacterium HTCC2654 Gene: RB2654_15926: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Roseobacter sp. MED193 Gene: MED193_16499: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Roseovarius nubinhibens ISM Gene: ISM_13550: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Roseovarius sp. 217 Gene: ROS217_04080: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Silicibacter TM1040 Gene: TM1040_2439: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Silicibacter pomeroyi DSS-3 Gene: SPO0712: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	Sulfitobacter sp. EE-36 Gene: EE36_04873: HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)	HPr kinase/phosphorylase (EC 2.7.1.-) (EC 2.7.4.-)
manX	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0539: Uncharacterized P-loop ATPase protein UPF0042	Loktanella vestfoldensis SKA53 Gene: SKA53_13158: Uncharacterized P-loop ATPase protein UPF0042	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_06889: Uncharacterized P-loop ATPase protein UPF0042	Oceanicola batsensis HTCC2597 Gene: OB2597_10149: Uncharacterized P-loop ATPase protein UPF0042	Oceanicola granulosus HTCC2516 Gene: OG2516_08688: Uncharacterized P-loop ATPase protein UPF0042	Paracoccus denitrificans PD1222 Gene: Pden_2850: Uncharacterized P-loop ATPase protein UPF0042	Rhodobacter sphaeroides 2.4.1 Gene: RSP_1684: Uncharacterized P-loop ATPase protein UPF0042	Rhodobacterales bacterium HTCC2654 Gene: RB2654_15931: Uncharacterized P-loop ATPase protein UPF0042	Roseobacter sp. MED193 Gene: MED193_16504: Uncharacterized P-loop ATPase protein UPF0042	Roseovarius nubinhibens ISM Gene: ISM_13555: Uncharacterized P-loop ATPase protein UPF0042	Roseovarius sp. 217 Gene: ROS217_04075: Uncharacterized P-loop ATPase protein UPF0042	Silicibacter TM1040 Gene: TM1040_2438: Uncharacterized P-loop ATPase protein UPF0042	Silicibacter pomeroyi DSS-3 Gene: SPO0713: Uncharacterized P-loop ATPase protein UPF0042	Sulfitobacter sp. EE-36 Gene: EE36_04868: Uncharacterized P-loop ATPase protein UPF0042	Uncharacterized P-loop ATPase protein UPF0042
HNE_0438	Hyphomonas neptunium ATCC 15444 Gene: HNE_0438: PTS system IIA component, mannose/fructose/sorbose (Man) family	Jannaschia sp. CCS1 Gene: Jann_0540: PTS system IIA component, mannose/fructose/sorbose (Man) family	Loktanella vestfoldensis SKA53 Gene: SKA53_13163: PTS system IIA component, mannose/fructose/sorbose (Man) family	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_11213: PTS system IIA component, mannose/fructose/sorbose (Man) family	Oceanicola batsensis HTCC2597 Gene: OB2597_10144: PTS system IIA component, mannose/fructose/sorbose (Man) family	Oceanicola granulosus HTCC2516 Gene: OG2516_08683: PTS system IIA component, mannose/fructose/sorbose (Man) family	Paracoccus denitrificans PD1222 Gene: Pden_2849: PTS system IIA component, mannose/fructose/sorbose (Man) family	Rhodobacter sphaeroides 2.4.1 Gene: RSP_1685: PTS system IIA component, mannose/fructose/sorbose (Man) family	Rhodobacterales bacterium HTCC2654 Gene: RB2654_15936: PTS system IIA component, mannose/fructose/sorbose (Man) family	Roseobacter sp. MED193 Gene: MED193_16509: PTS system IIA component, mannose/fructose/sorbose (Man) family	Roseovarius nubinhibens ISM Gene: ISM_13560: PTS system IIA component, mannose/fructose/sorbose (Man) family	Roseovarius sp. 217 Gene: ROS217_04070: PTS system IIA component, mannose/fructose/sorbose (Man) family	Silicibacter TM1040 Gene: TM1040_2437: PTS system IIA component, mannose/fructose/sorbose (Man) family	Silicibacter pomeroyi DSS-3 Gene: SPO0714: PTS system IIA component, mannose/fructose/sorbose (Man) family	Sulfitobacter sp. EE-36 Gene: EE36_04863: PTS system IIA component, mannose/fructose/sorbose (Man) family	PTS system IIA component, mannose/fructose/sorbose (Man) family
phbH	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0541: Phosphocarrier protein HPr EC=2.7.11.-	Loktanella vestfoldensis SKA53 Gene: SKA53_13168: Phosphocarrier protein HPr EC=2.7.11.-	Oceanicaulis alexandrii HTCC2633 Gene: OA2633_11208: Phosphocarrier protein HPr EC=2.7.11.-	Oceanicola batsensis HTCC2597 Gene: OB2597_10139: Phosphocarrier protein HPr EC=2.7.11.-	Oceanicola granulosus HTCC2516 Gene: OG2516_08678: Phosphocarrier protein HPr EC=2.7.11.-	Paracoccus denitrificans PD1222 Gene: Pden_2848: Phosphocarrier protein HPr EC=2.7.11.-	Rhodobacter sphaeroides 2.4.1 Gene: RSP_1686: Phosphocarrier protein HPr EC=2.7.11.-	Rhodobacterales bacterium HTCC2654 Gene: RB2654_15941: Phosphocarrier protein HPr EC=2.7.11.-	Roseobacter sp. MED193 Gene: MED193_16514: Phosphocarrier protein HPr EC=2.7.11.-	Roseovarius nubinhibens ISM Gene: ISM_13565: Phosphocarrier protein HPr EC=2.7.11.-	Roseovarius sp. 217 Gene: ROS217_04065: Phosphocarrier protein HPr EC=2.7.11.-	Silicibacter TM1040 Gene: TM1040_2436: Phosphocarrier protein HPr EC=2.7.11.-	Silicibacter pomeroyi DSS-3 Gene: SPO0715: Phosphocarrier protein HPr EC=2.7.11.-	Sulfitobacter sp. EE-36 Gene: EE36_04858: Phosphocarrier protein HPr EC=2.7.11.-	Phosphocarrier protein HPr EC=2.7.11.-
Jann_0542	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1 Gene: Jann_0542: hypothetical protein	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597 Gene: OB2597_10134: hypothetical protein	Oceanicola granulosus HTCC2516 Gene: OG2516_08673: hypothetical protein	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654 Gene: RB2654_15946: hypothetical protein	Roseobacter sp. MED193 Gene: MED193_16519: hypothetical protein	Roseovarius nubinhibens ISM Gene: ISM_13570: hypothetical protein	Roseovarius sp. 217 Gene: ROS217_04060: hypothetical protein	Silicibacter TM1040 Gene: TM1040_2435: hypothetical protein	Silicibacter pomeroyi DSS-3 Gene: SPO0716: hypothetical protein	Sulfitobacter sp. EE-36 Gene: EE36_04853: hypothetical protein	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Chvl - Rhodobacterales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --