Regulog HTCS_Man-1 - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Alpha-mannans utilization
Effector:	Alpha-mannans
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By effector - Alpha-mannans
By pathway - Alpha-mannans utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483	4	1
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482	9	2
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
sbp_Man-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -254 score = 9.44416 sequence = GTGTATTATAGCGACA-(5)-GTAAATATTTGTGCCA Gene: BT2627: Six-beta-propeller protein, cell surface exposed, putatively involved in alpha-1,2-mannan binding	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Six-beta-propeller protein, cell surface exposed, putatively involved in alpha-1,2-mannan binding
susC_Man-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2626: TonB-dependent outer membrane transporter of alpha-1,2-mannan oligosaccharides	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	TonB-dependent outer membrane transporter of alpha-1,2-mannan oligosaccharides
susD_Man-3	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2625: Outer membrane polysaccharide binding protein for alpha-1,2-mannan oligosaccharides	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Outer membrane polysaccharide binding protein for alpha-1,2-mannan oligosaccharides
BT2624	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2624: Hypothetical protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Hypothetical protein
manF2	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2623: Surface endo-alpha-1,6-mannanase, GH76 family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Surface endo-alpha-1,6-mannanase, GH76 family

CRON 2.
manB	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -132 score = 9.43215 sequence = GTAAAGTTCCGTGCCA-(5)-GTTAACTTCAGCGACA Gene: BACOVA_03629: alpha-1,2/3-mannosidase, GH92 family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -132 score = 9.31121 sequence = GTAAAGCTCCGTGCCA-(5)-GTTAATTTCAGCGACA Gene: BT2629: alpha-1,2/3-mannosidase, GH92 family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	alpha-1,2/3-mannosidase, GH92 family
BT2630	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03628: Mannose-6-phosphatase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2630: Mannose-6-phosphatase	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Mannose-6-phosphatase
manF1	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03627: Periplasmic alpha-1,6-endo-mannanase, GH76 family	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2631: Periplasmic alpha-1,6-endo-mannanase, GH76 family	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Periplasmic alpha-1,6-endo-mannanase, GH76 family
manX	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03626: Periplasmic alpha-1,6-mannosidase (EC 3.2.1.-)	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT2632: Periplasmic alpha-1,6-mannosidase (EC 3.2.1.-)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Periplasmic alpha-1,6-mannosidase (EC 3.2.1.-)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog HTCS_Man-1 - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --