Regulog HTCS_Fru - Bacteroidaceae
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | |
| Biological process: | Fructosides utilization; Fructose utilization |
| Effector: | Fructose |
| Phylum: | Bacteroidetes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By effector - Fructose
- By pathway - Fructosides utilization
- By pathway - Fructose utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacteroides cellulosilyticus DSM 14838 | 7 | 3 |
| Bacteroides coprophilus DSM 18228 | 4 | 1 |
| Bacteroides dorei DSM 17855 | 5 | 1 |
| Bacteroides eggerthii DSM 20697 | ||
| Bacteroides fragilis NCTC 9343 | 5 | 2 |
| Bacteroides ovatus ATCC 8483 | 4 | 3 |
| Bacteroides plebeius DSM 17135 | 9 | 2 |
| Bacteroides stercoris ATCC 43183 | 8 | 2 |
| Bacteroides thetaiotaomicron VPI-5482 | 9 | 4 |
| Bacteroides uniformis ATCC 8492 | 7 | 2 |
| Bacteroides vulgatus ATCC 8482 | 5 | 2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| BF3178 |
|
*
Bacteroides coprophilus DSM 18228 Site: position = -94 score = 7.34365 sequence = GATACATTC-(12)-GAAACATTT Gene: BACCOPRO_02545: Predicted fructan specific TonB-dependent receptor |
*
Bacteroides dorei DSM 17855 Site: position = -28 score = 8.06839 sequence = GAAACAAAA-(12)-GTAACAAAT Gene: BACDOR_00290: Predicted fructan specific TonB-dependent receptor |
|
*
Bacteroides fragilis NCTC 9343 Site: position = -44 score = 8.22666 sequence = GAAACAAAA-(12)-GAAACAAAT Gene: BF3178: Predicted fructan specific TonB-dependent receptor |
|
*
Bacteroides plebeius DSM 17135 Site: position = -115 score = 7.02847 sequence = GAAACAATA-(12)-GCAACATTC Gene: BACPLE_03869: Predicted fructan specific TonB-dependent receptor |
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*
Bacteroides vulgatus ATCC 8482 Site: position = -97 score = 8.06839 sequence = GAAACAAAA-(12)-GTAACAAAT Gene: BVU_1662: Predicted fructan specific TonB-dependent receptor |
Predicted fructan specific TonB-dependent receptor |
| scrL |
|
Gene: BACCOPRO_02544: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
Gene: BACDOR_00291: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
*
Bacteroides fragilis NCTC 9343 Site: position = -114 score = 7.73225 sequence = GTATCAATC-(12)-GAAACAAAA Gene: BF3177: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
*
Bacteroides ovatus ATCC 8483 Site: position = -118 score = 7.82921 sequence = GTATCAAAT-(12)-GAAACAAAG Gene: BACOVA_04507: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
Gene: BACPLE_03870: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -116 score = 7.73543 sequence = GTATCAAAA-(12)-GAAACAAAG Gene: BT1765: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
|
*
Bacteroides vulgatus ATCC 8482 Site: position = -19 score = 8.38519 sequence = GTAACATTT-(12)-GAAACAAAT Gene: BVU_1663: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
Sucrose-6-phosphate hydrolase (EC 3.2.1.26) |
| galA |
Gene: BACCELL_05498: Alpha-galactosidase (EC 3.2.1.22) |
|
|
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Gene: BF0233: Alpha-galactosidase (EC 3.2.1.22) |
Gene: BACOVA_01896: Alpha-galactosidase (EC 3.2.1.22) |
Gene: BACPLE_03871: Alpha-galactosidase (EC 3.2.1.22) |
Gene: BACSTE_02659: Alpha-galactosidase (EC 3.2.1.22) |
|
|
|
Alpha-galactosidase (EC 3.2.1.22) |
| fruP |
*
Bacteroides cellulosilyticus DSM 14838 Site: position = -152 score = 7.48457 sequence = GTATCATAA-(12)-GTAACAAGA Gene: BACCELL_05504: Predicted fructose transporter |
Gene: BACCOPRO_02543: Predicted fructose transporter |
Gene: BACDOR_00292: Predicted fructose transporter |
|
Gene: BF3176: Predicted fructose transporter |
Gene: BACOVA_04500: Predicted fructose transporter |
Gene: BACPLE_03872: Predicted fructose transporter |
Gene: BACSTE_03469: Predicted fructose transporter |
Gene: BT1758: Predicted fructose transporter |
Gene: BACUNI_01160: Predicted fructose transporter |
Gene: BVU_1664: Predicted fructose transporter |
Predicted fructose transporter |
| fruK |
Gene: BACCELL_05503: Fructokinase (EC 2.7.1.4) |
Gene: BACCOPRO_02542: Fructokinase (EC 2.7.1.4) |
Gene: BACDOR_00293: Fructokinase (EC 2.7.1.4) |
|
Gene: BF3175: Fructokinase (EC 2.7.1.4) |
Gene: BACOVA_04498: Fructokinase (EC 2.7.1.4) |
Gene: BACPLE_03873: Fructokinase (EC 2.7.1.4) |
Gene: BACSTE_03468: Fructokinase (EC 2.7.1.4) |
Gene: BT1757: Fructokinase (EC 2.7.1.4) |
Gene: BACUNI_01162: Fructokinase (EC 2.7.1.4) |
Gene: BVU_1665: Fructokinase (EC 2.7.1.4) |
Fructokinase (EC 2.7.1.4) |
| HTCS_Fru |
Gene: BACCELL_05497: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BACCOPRO_02541: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BACDOR_00294: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
|
Gene: BF3174: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BACOVA_04496: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BACPLE_03874: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BACSTE_03467: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BT1754: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BACUNI_01163: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Gene: BVU_1666: Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
Fructans utilization transcriptional hybrid regulator/sensor kinase, AraC family HTH |
| scrB |
*2
Bacteroides cellulosilyticus DSM 14838 Site: position = -160 score = 7.56197 sequence = GTTTCATAA-(12)-GTAACAAAA Site: position = -120 score = 8.22855 sequence = GTATCATAT-(12)-GAAACATAA Gene: BACCELL_05508: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) Gene: BACCELL_05507: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
|
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|
*
Bacteroides ovatus ATCC 8483 Site: position = -121 score = 8.2926 sequence = GTAACATTT-(12)-GAAACAAAA Gene: BACOVA_04501: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
Gene: BACPLE_03868: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
*
Bacteroides stercoris ATCC 43183 Site: position = -133 score = 7.98434 sequence = GTATCAATT-(12)-GTAACATTT Gene: BACSTE_03470: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -111 score = 7.88812 sequence = GTAACATCT-(12)-GAAACAAAA Gene: BT1759: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
*
Bacteroides uniformis ATCC 8492 Site: position = -105 score = 8.2926 sequence = GTAACATTT-(12)-GAAACAAAA Gene: BACUNI_01159: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
|
Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
| BACUNI_01161 |
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Gene: BACUNI_01161: Hypothetical protein |
|
Hypothetical protein |
| susC_Fru-1 |
*
Bacteroides cellulosilyticus DSM 14838 Site: position = -156 score = 7.99065 sequence = GTTACAAAT-(12)-GAAACATAA Gene: BACCELL_05510: TonB-dependent outer membrane transporter for fructan oligosaccharides |
|
|
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Gene: BF4323: TonB-dependent outer membrane transporter for fructan oligosaccharides |
*
Bacteroides ovatus ATCC 8483 Site: position = -115 score = 8.10733 sequence = GCAACAAAT-(12)-GAAACATTT Gene: BACOVA_04505: TonB-dependent outer membrane transporter for fructan oligosaccharides |
*
Bacteroides plebeius DSM 17135 Site: position = -125 score = 8.01355 sequence = GCAACATAA-(12)-GAAACATTT Gene: BACPLE_03866: TonB-dependent outer membrane transporter for fructan oligosaccharides |
*
Bacteroides stercoris ATCC 43183 Site: position = -156 score = 7.59778 sequence = GAAACAAAT-(12)-GTATCATTT Gene: BACSTE_03472: TonB-dependent outer membrane transporter for fructan oligosaccharides |
*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -115 score = 8.10733 sequence = GCAACATAT-(12)-GAAACATTT Gene: BT1763: TonB-dependent outer membrane transporter for fructan oligosaccharides |
*2
Bacteroides uniformis ATCC 8492 Gene: BACUNI_00061: TonB-dependent outer membrane transporter for fructan oligosaccharides Site: position = -81 score = 8.00313 sequence = GTATCAAAA-(12)-GTAACATTT Gene: BACUNI_01153: TonB-dependent outer membrane transporter for fructan oligosaccharides |
|
TonB-dependent outer membrane transporter for fructan oligosaccharides |
| susD_Fru-1 |
Gene: BACCELL_05511: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
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Gene: BF4322: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
Gene: BACOVA_04504: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
Gene: BACPLE_03867: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
Gene: BACSTE_03473: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
Gene: BT1762: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
2
Bacteroides uniformis ATCC 8492 Gene: BACUNI_00062: Outer membrane polysaccharide binding protein for fructan oligosaccharides Gene: BACUNI_01154: Outer membrane polysaccharide binding protein for fructan oligosaccharides |
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Outer membrane polysaccharide binding protein for fructan oligosaccharides |
| scrX |
Gene: BACCELL_05512: Predicted outer membrane glycosyl hydrolase |
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Gene: BACSTE_03474: Predicted outer membrane glycosyl hydrolase |
Gene: BT1761: Predicted outer membrane glycosyl hydrolase |
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Predicted outer membrane glycosyl hydrolase |
| scrM |
Gene: BACCELL_05513: Predicted sucrose-6-phosphate hydrolase |
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Gene: BACSTE_03475: Predicted sucrose-6-phosphate hydrolase |
Gene: BT1760: Predicted sucrose-6-phosphate hydrolase |
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Predicted sucrose-6-phosphate hydrolase |
| CRON 2. | ||||||||||||
| scrB2 |
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Gene: BF4327: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
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*
Bacteroides thetaiotaomicron VPI-5482 Site: position = -98 score = 7.1897 sequence = GTAACGTTT-(12)-GAATCATTT Gene: BT3082: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
Gene: BACUNI_01158: Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
|
Levanase (2,6-beta-D-fructofuranosidase) (EC 3.2.1.65) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |