Regulog AgaR2 - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | N-acetylgalactosamine utilization |
| Effector: | Galactosamine-6-phosphate; N-acetylgalactosamine-6-phosphate |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - AgaR
- By TF family - DeoR
- By effector - Galactosamine-6-phosphate
- By effector - N-acetylgalactosamine-6-phosphate
- By pathway - N-acetylgalactosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Serratia proteamaculans 568 | 9 | 2 |
| Edwardsiella tarda EIB202 | 5 | 1 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 9 | 1 |
| Genes | Function | |||
|---|---|---|---|---|
| CRON 1. | ||||
| agaR |
*2
Serratia proteamaculans 568 Site: position = -165 score = 7.29833 sequence = TTTTCA-(13)-CGAAAG Gene: Spro_3849: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family Site: position = -201 score = 8.23278 sequence = CTTTCG-(13)-CGAAAG Gene: Spro_2577: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
*
Edwardsiella tarda EIB202 Site: position = -157 score = 8.23278 sequence = CTTTCG-(13)-CGAAAG Gene: ETAE_0677: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -176 score = 7.77337 sequence = CTTTCG-(13)-CGAAAC Gene: plu0832: Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
Transcriptional repressor of N-acetylgalactosamine utilization, DeoR family |
| agaZ |
Gene: Spro_3848: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
|
Gene: plu0833: Tagatose-6-phosphate kinase (EC 2.7.1.144) |
Tagatose-6-phosphate kinase (EC 2.7.1.144) |
| agaS |
Gene: Spro_2578: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) |
Gene: ETAE_0678: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) |
Gene: plu0834: Galactosamine-6-phosphate isomerase (EC 5.3.1.-) |
Galactosamine-6-phosphate isomerase (EC 5.3.1.-) |
| agaB-II |
Gene: Spro_3847: PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69) |
Gene: ETAE_0679: PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69) |
Gene: plu0835: PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69) |
PTS system, predicted galactosamine-specific IIB component (EC 2.7.1.69) |
| agaC-II |
Gene: Spro_3846: PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69) |
Gene: ETAE_0680: PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69) |
Gene: plu0836: PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69) |
PTS system, predicted galactosamine-specific IIC component (EC 2.7.1.69) |
| agaD-II |
Gene: Spro_3845: PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69) |
Gene: ETAE_0681: PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69) |
Gene: plu0837: PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69) |
PTS system, predicted galactosamine-specific IID component (EC 2.7.1.69) |
| agaF-II |
Gene: Spro_3844: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) |
|
Gene: plu0838: PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) |
PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) |
| agaY |
Gene: Spro_2579: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-) |
Gene: ETAE_2526: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-) |
Gene: plu0839: Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-) |
Tagatose-1,6-bisphosphate aldolase (EC 4.1.2.-) |
| agaH |
|
|
Gene: plu0840: Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family |
Predicted secreted ?-N-acetylgalactosaminidase (EC 3.2.1.49), GH36 family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |