Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog LytT - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: LytTR
Regulation mode:
Biological process: Penicillin resistance
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 9 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42 2 1
Bacillus cereus ATCC 14579 2 1
Bacillus clausii KSM-K16
Bacillus halodurans C-125
Bacillus licheniformis DSM 13 2 1
Bacillus pumilus SAFR-032 2 1
Bacillus subtilis subsp. subtilis str. 168 2 1
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lrgA
 
Anoxybacillus flavithermus WK1
*
Bacillus amyloliquefaciens FZB42

Site:
position = -103
score = 8.1826
sequence = TTTTTGCATTTC-(9)-ATTCAGCCGTTT

Site:
position = -124
score = 9.47935
sequence = CTTTTGCATTTC-(9)-TTTTTGCATTTC

Gene: RBAM_025950: Antiholin-like protein LrgA
*
Bacillus cereus ATCC 14579

Site:
position = -116
score = 7.16921
sequence = CTTTTGTATTTC-(9)-TATTTGTAACTG

Gene: BC5439: Antiholin-like protein LrgA
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
*
Bacillus licheniformis DSM 13

Site:
position = -125
score = 8.65106
sequence = GATTTGCATTTC-(9)-TTTCTGCAATTG

Site:
position = -104
score = 7.73
sequence = TTTCTGCAATTG-(9)-ATCCGGCAAGTT

Gene: BLi03037: Antiholin-like protein LrgA
*
Bacillus pumilus SAFR-032

Site:
position = -104
score = 7.50761
sequence = TTTCTGCATTTC-(9)-ATCCGGCGAGTT

Site:
position = -125
score = 9.03525
sequence = TATTTGTATTTC-(9)-TTTCTGCATTTC

Gene: BPUM_2534: Antiholin-like protein LrgA
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -125
score = 9.23734
sequence = TTTTTGCATTTC-(9)-ATTCTGCAACTC

Site:
position = -104
score = 7.86038
sequence = ATTCTGCAACTC-(9)-ATACGGCATGTT

Gene: BSU28910: Antiholin-like protein LrgA
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
Antiholin-like protein LrgA
lrgB
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42

Gene: RBAM_025940: LrgA-associated membrane protein LrgB
 
Bacillus cereus ATCC 14579

Gene: BC5438: LrgA-associated membrane protein LrgB
 
Bacillus clausii KSM-K16
 
Bacillus halodurans C-125
 
Bacillus licheniformis DSM 13

Gene: BLi03036: LrgA-associated membrane protein LrgB
 
Bacillus pumilus SAFR-032

Gene: BPUM_2533: LrgA-associated membrane protein LrgB
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU28900: LrgA-associated membrane protein LrgB
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2
LrgA-associated membrane protein LrgB
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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