Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YvcP - Bacillales

Properties
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Bacitracin resistance
Effector: YvcQ, sensor histidine kinase
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42
Bacillus cereus ATCC 14579
Bacillus clausii KSM-K16 2 1
Bacillus halodurans C-125 2 1
Bacillus licheniformis DSM 13
Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168 2 1
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yvcR
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579
*
Bacillus clausii KSM-K16

Site:
position = -108
score = 6.97729
sequence = TGACAAA-(2)-TGTAAGC

Gene: ABC3229: ABC transporter ATP-binding protein YvcR
*
Bacillus halodurans C-125

Site:
position = -94
score = 6.61848
sequence = TGACAAC-(2)-TGTCACC

Gene: BH0753: ABC transporter ATP-binding protein YvcR
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
*
Bacillus subtilis subsp. subtilis str. 168

Site:
position = -96
score = 7.0584
sequence = TGACAGC-(2)-TGTAAGA

Gene: BSU34700: ABC transporter ATP-binding protein YvcR
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
*
Paenibacillus sp. JDR-2

Site:
position = -123
score = 6.17684
sequence = TGACAAA-(2)-CGTAAGA

Gene: Pjdr2_4843: ABC transporter ATP-binding protein YvcR
ABC transporter ATP-binding protein YvcR
yvcS
 
Anoxybacillus flavithermus WK1
 
Bacillus amyloliquefaciens FZB42
 
Bacillus cereus ATCC 14579
 
Bacillus clausii KSM-K16

Gene: ABC3230: ABC transporter permease protein YvcS
 
Bacillus halodurans C-125

Gene: BH0752: ABC transporter permease protein YvcS
 
Bacillus licheniformis DSM 13
 
Bacillus pumilus SAFR-032
 
Bacillus subtilis subsp. subtilis str. 168

Gene: BSU34690: ABC transporter permease protein YvcS
 
Geobacillus kaustophilus HTA426
 
Oceanobacillus iheyensis HTE831
 
Paenibacillus sp. JDR-2

Gene: Pjdr2_4842: ABC transporter permease protein YvcS
ABC transporter permease protein YvcS
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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