Regulog SrlR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Sorbitol utilization |
| Effector: | Sorbitol-6-phosphate |
| Phylum: | Proteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - DeoR
- By effector - Sorbitol-6-phosphate
- By pathway - Sorbitol utilization
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 7 | 1 |
| Edwardsiella tarda EIB202 | ||
| Enterobacter sp. 638 | ||
| Erwinia amylovora ATCC 49946 | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ||
| Escherichia coli str. K-12 substr. MG1655 | 7 | 1 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 4 | 1 |
| Photorhabdus luminescens subsp. laumondii TTO1 | ||
| Proteus mirabilis HI4320 | ||
| Salmonella typhimurium LT2 | 7 | 1 |
| Serratia proteamaculans 568 | 7 | 1 |
| Yersinia pestis KIM |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| srlA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -122 score = 9.03743 sequence = AACTTTCA-(13)-ATCTTTCA Gene: CKO_04056: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
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Gene: EAM_0521: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
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Escherichia coli str. K-12 substr. MG1655 Site: position = -122 score = 9.03743 sequence = AACTTTCA-(13)-ATCTTTCA Gene: b2702: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -142 score = 8.74989 sequence = ATATTTCA-(13)-ATCTTTCA Site: position = -121 score = 9.27831 sequence = ATCTTTCA-(13)-ATCTTTCA Gene: KPN_03037: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
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*
Salmonella typhimurium LT2 Site: position = -122 score = 8.22147 sequence = ATCTTTCA-(13)-TTCTTTTA Gene: STM2832: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
*
Serratia proteamaculans 568 Site: position = -139 score = 9.03743 sequence = AACTTTCA-(13)-ATCTTTCA Gene: Spro_3569: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
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PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) |
| srlE |
Gene: CKO_04057: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
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Gene: EAM_0522: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
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Gene: b2703: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
Gene: KPN_03038: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
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Gene: STM2833: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
Gene: Spro_3570: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
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PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) |
| srlB |
Gene: CKO_04058: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
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Gene: EAM_0523: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
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Gene: b2704: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
Gene: KPN_03039: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
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Gene: STM2834: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
Gene: Spro_3571: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
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PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) |
| srlD |
Gene: CKO_04059: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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Gene: EAM_0524: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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Gene: b2705: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
Gene: KPN_03040: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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Gene: STM2835: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
Gene: Spro_3572: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
| srlM |
Gene: CKO_04060: Glucitol operon activator protein |
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Gene: EAM_0525: Glucitol operon activator protein |
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Gene: b2706: Glucitol operon activator protein |
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Gene: STM2836: Glucitol operon activator protein |
Gene: Spro_3573: Glucitol operon activator protein |
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Glucitol operon activator protein |
| srlR |
Gene: CKO_04061: transcriptional repressor for glucitol operon (DeoR family) |
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Gene: EAM_0526: transcriptional repressor for glucitol operon (DeoR family) |
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Gene: b2707: transcriptional repressor for glucitol operon (DeoR family) |
Gene: KPN_03042: transcriptional repressor for glucitol operon (DeoR family) |
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Gene: STM2837: transcriptional repressor for glucitol operon (DeoR family) |
Gene: Spro_3574: transcriptional repressor for glucitol operon (DeoR family) |
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transcriptional repressor for glucitol operon (DeoR family) |
| gutQ |
Gene: CKO_04062: putative sugar phosphate isomerase |
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Gene: EAM_0527: putative sugar phosphate isomerase |
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Gene: b2708: putative sugar phosphate isomerase |
Gene: KPN_03043: putative sugar phosphate isomerase |
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Gene: STM2838.S: putative sugar phosphate isomerase |
Gene: Spro_3575: putative sugar phosphate isomerase |
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putative sugar phosphate isomerase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |