Regulog SrlR - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	DeoR
Regulation mode:	repressor
Biological process:	Sorbitol utilization
Effector:	Sorbitol-6-phosphate
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - DeoR
By effector - Sorbitol-6-phosphate
By pathway - Sorbitol utilization

Statistics of regulated genes
Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895	7	1
Edwardsiella tarda EIB202
Enterobacter sp. 638
Erwinia amylovora ATCC 49946
Erwinia carotovora subsp. atroseptica SCRI1043
Escherichia coli str. K-12 substr. MG1655	7	1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	4	1
Photorhabdus luminescens subsp. laumondii TTO1
Proteus mirabilis HI4320
Salmonella typhimurium LT2	7	1
Serratia proteamaculans 568	7	1
Yersinia pestis KIM

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
srlA	* Citrobacter koseri ATCC BAA-895 Site: position = -122 score = 9.03743 sequence = AACTTTCA-(13)-ATCTTTCA Gene: CKO_04056: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0521: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	Erwinia carotovora subsp. atroseptica SCRI1043	* Escherichia coli str. K-12 substr. MG1655 Site: position = -122 score = 9.03743 sequence = AACTTTCA-(13)-ATCTTTCA Gene: b2702: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	* Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -142 score = 8.74989 sequence = ATATTTCA-(13)-ATCTTTCA Site: position = -121 score = 9.27831 sequence = ATCTTTCA-(13)-ATCTTTCA Gene: KPN_03037: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	* Salmonella typhimurium LT2 Site: position = -122 score = 8.22147 sequence = ATCTTTCA-(13)-TTCTTTTA Gene: STM2832: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	* Serratia proteamaculans 568 Site: position = -139 score = 9.03743 sequence = AACTTTCA-(13)-ATCTTTCA Gene: Spro_3569: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)	Yersinia pestis KIM	PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69)
srlE	Citrobacter koseri ATCC BAA-895 Gene: CKO_04057: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0522: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2703: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03038: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2833: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	Serratia proteamaculans 568 Gene: Spro_3570: PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)	Yersinia pestis KIM	PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69)
srlB	Citrobacter koseri ATCC BAA-895 Gene: CKO_04058: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0523: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2704: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03039: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2834: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	Serratia proteamaculans 568 Gene: Spro_3571: PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)	Yersinia pestis KIM	PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69)
srlD	Citrobacter koseri ATCC BAA-895 Gene: CKO_04059: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0524: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2705: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03040: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2835: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Serratia proteamaculans 568 Gene: Spro_3572: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)	Yersinia pestis KIM	Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140)
srlM	Citrobacter koseri ATCC BAA-895 Gene: CKO_04060: Glucitol operon activator protein	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0525: Glucitol operon activator protein	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2706: Glucitol operon activator protein	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2836: Glucitol operon activator protein	Serratia proteamaculans 568 Gene: Spro_3573: Glucitol operon activator protein	Yersinia pestis KIM	Glucitol operon activator protein
srlR	Citrobacter koseri ATCC BAA-895 Gene: CKO_04061: transcriptional repressor for glucitol operon (DeoR family)	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0526: transcriptional repressor for glucitol operon (DeoR family)	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2707: transcriptional repressor for glucitol operon (DeoR family)	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03042: transcriptional repressor for glucitol operon (DeoR family)	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2837: transcriptional repressor for glucitol operon (DeoR family)	Serratia proteamaculans 568 Gene: Spro_3574: transcriptional repressor for glucitol operon (DeoR family)	Yersinia pestis KIM	transcriptional repressor for glucitol operon (DeoR family)
gutQ	Citrobacter koseri ATCC BAA-895 Gene: CKO_04062: putative sugar phosphate isomerase	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia amylovora ATCC 49946 Gene: EAM_0527: putative sugar phosphate isomerase	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655 Gene: b2708: putative sugar phosphate isomerase	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Gene: KPN_03043: putative sugar phosphate isomerase	Photorhabdus luminescens subsp. laumondii TTO1	Proteus mirabilis HI4320	Salmonella typhimurium LT2 Gene: STM2838.S: putative sugar phosphate isomerase	Serratia proteamaculans 568 Gene: Spro_3575: putative sugar phosphate isomerase	Yersinia pestis KIM	putative sugar phosphate isomerase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SrlR - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --