Regulog sucA - Burkholderia
| Regulator type: | RNA regulatory element |
| Name: | sucA |
| RFAM: | RF01070 |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Burkholderia
- By RNA motif - sucA
- By pathway - Tricarboxylic acid cycle
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia pseudomallei K96243 | 3 | 1 |
| Burkholderia mallei ATCC 23344 | 3 | 1 |
| Burkholderia sp. 383 | 3 | 1 |
| Burkholderia cepacia AMMD | 3 | 1 |
| Burkholderia vietnamiensis G4 | 3 | 1 |
| Burkholderia glumae BGR1 | 3 | 1 |
| Burkholderia xenovorans LB400 | 3 | 1 |
| Burkholderia phymatum STM815 | 3 | 1 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| sucA |
*
Burkholderia pseudomallei K96243 Site: position = -88 score = 80.17 sequence = CGCGCAATCCGCTAA... Gene: BPSL1909: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia mallei ATCC 23344 Site: position = -88 score = 80.17 sequence = CGCGCAATCCGCTAA... Gene: BMA1052: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia sp. 383 Site: position = -86 score = 83.0 sequence = CGCAATCCGCTAAAC... Gene: Bcep18194_A4649: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia cepacia AMMD Site: position = -86 score = 80.85 sequence = CGCAATCCGCTAAAC... Gene: Bamb_1390: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia vietnamiensis G4 Site: position = -86 score = 80.85 sequence = CGCAATCCGCTAAAC... Gene: Bcep1808_1474: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia glumae BGR1 Site: position = -88 score = 79.61 sequence = CGCGCAATCCGCTAA... Gene: bglu_1g19940: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia xenovorans LB400 Site: position = -87 score = 81.63 sequence = CGCAATCCGCTAAAC... Gene: Bxe_A2812: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Burkholderia phymatum STM815 Site: position = -88 score = 79.86 sequence = CGCGCAATCCGCTAA... Gene: Bphy_1721: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
| sucB |
Gene: BPSL1908: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: BMA1051: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Bcep18194_A4650: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Bamb_1391: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Bcep1808_1475: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: bglu_1g19930: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Bxe_A2811: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Bphy_1720: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
| lpdA |
Gene: BPSL1907: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: BMA1050: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Bcep18194_A4651: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Bamb_1392: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Bcep1808_1476: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: bglu_1g19920: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Bxe_A2810: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Bphy_1719: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |