Regulog PutR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | SrmR |
| Regulation mode: | activator |
| Biological process: | Proline utilization |
| Effector: | Proline |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - SrmR
- By effector - Proline
- By pathway - Proline utilization
| Genome | Genes | Operons |
|---|---|---|
| Anoxybacillus flavithermus WK1 | ||
| Bacillus amyloliquefaciens FZB42 | 4 | 1 |
| Bacillus cereus ATCC 14579 | ||
| Bacillus clausii KSM-K16 | ||
| Bacillus halodurans C-125 | ||
| Bacillus licheniformis DSM 13 | 4 | 1 |
| Bacillus pumilus SAFR-032 | 3 | 1 |
| Bacillus subtilis subsp. subtilis str. 168 | 4 | 1 |
| Geobacillus kaustophilus HTA426 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| putB |
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Bacillus amyloliquefaciens FZB42 Site: position = -59 score = 6.85642 sequence = TTGTGGTAAAACCACAA Gene: RBAM_003440: Proline dehydrogenase (EC 1.5.99.8) |
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Bacillus licheniformis DSM 13 Site: position = -121 score = 6.73268 sequence = TTGTGGAAAAACCACAA Gene: BLi00373: Proline dehydrogenase (EC 1.5.99.8) |
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Bacillus pumilus SAFR-032 Site: position = -114 score = 6.65439 sequence = TTGTGATAAAACCACAA Gene: BPUM_0300: Proline dehydrogenase (EC 1.5.99.8) |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -124 score = 6.53066 sequence = TTGTGGCAAACCCACAA Gene: BSU03200: Proline dehydrogenase (EC 1.5.99.8) |
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Proline dehydrogenase (EC 1.5.99.8) |
| putC |
Gene: Aflv_0249: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: RBAM_003450: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: BC0344: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: ABC0965: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
2
Bacillus halodurans C-125 Gene: BH3940: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) Gene: BH2737: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: BLi00374: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: BPUM_0301: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: BSU03210: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: GK0187: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
Gene: OB1349: Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
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Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) |
| putP |
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Gene: RBAM_003460: Proline/sodium symporter (TC 2.A.21.2.1) |
Gene: BC1231: Proline/sodium symporter (TC 2.A.21.2.1) |
Gene: ABC3924: Proline/sodium symporter (TC 2.A.21.2.1) |
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Gene: BLi00375: Proline/sodium symporter (TC 2.A.21.2.1) |
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Gene: BSU03220: Proline/sodium symporter (TC 2.A.21.2.1) |
Gene: GK3452: Proline/sodium symporter (TC 2.A.21.2.1) |
Gene: OB1351: Proline/sodium symporter (TC 2.A.21.2.1) |
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Proline/sodium symporter (TC 2.A.21.2.1) |
| putR |
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Gene: RBAM_003470: Putative transcriptional regulator of proline utilization |
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Gene: BLi00376: Putative transcriptional regulator of proline utilization |
Gene: BPUM_0302: Putative transcriptional regulator of proline utilization |
Gene: BSU03230: Putative transcriptional regulator of proline utilization |
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Putative transcriptional regulator of proline utilization |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |