Regulog L10_leader - Mycobacteriaceae
| Regulator type: | RNA regulatory element |
| Name: | L10_leader |
| RFAM: | RF00557 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Actinobacteria |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By RNA motif - L10_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium tuberculosis H37Rv | ||
| Mycobacterium leprae TN | ||
| Mycobacterium marinum M | ||
| Mycobacterium avium 104 | ||
| Mycobacterium sp. JLS | ||
| Mycobacterium vanbaalenii PYR-1 | ||
| Mycobacterium flavescens PYR-GCK | ||
| Mycobacterium smegmatis str. MC2 155 | ||
| Mycobacterium abscessus ATCC 19977 | 2 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| rplJ |
Gene: Rv0651: LSU ribosomal protein L10p (P0) |
Gene: ML1896: LSU ribosomal protein L10p (P0) |
Gene: MMAR_0990: LSU ribosomal protein L10p (P0) |
Gene: MAV_4508: LSU ribosomal protein L10p (P0) |
Gene: Mjls_0994: LSU ribosomal protein L10p (P0) |
Gene: Mvan_1252: LSU ribosomal protein L10p (P0) |
Gene: Mflv_5101: LSU ribosomal protein L10p (P0) |
Gene: MSMEG_1364: LSU ribosomal protein L10p (P0) |
*
Mycobacterium abscessus ATCC 19977 Site: position = -235 score = 16.69 sequence = GTAACCTAATCCAGC... Gene: MAB_3877c: LSU ribosomal protein L10p (P0) |
LSU ribosomal protein L10p (P0) |
| rplL |
Gene: Rv0652: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: ML1895: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: MMAR_0991: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: MAV_4507: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: Mjls_0995: LSU ribosomal protein L7/L12 (P1/P2) |
2
Mycobacterium vanbaalenii PYR-1 Gene: Mvan_0786: LSU ribosomal protein L7/L12 (P1/P2) Gene: Mvan_1253: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: Mflv_5100: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: MSMEG_1365: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: MAB_3876c: LSU ribosomal protein L7/L12 (P1/P2) |
LSU ribosomal protein L7/L12 (P1/P2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |