Regulog L10_leader - Mycobacteriaceae

Properties
Regulator type:	RNA regulatory element
Name:	L10_leader
RFAM:	RF00557
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Phylum:	Actinobacteria

Member of regulog collections

By taxonomy - Mycobacteriaceae
By RNA motif - L10_leader
By pathway - Ribosome biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Mycobacterium tuberculosis H37Rv
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium avium 104
Mycobacterium sp. JLS
Mycobacterium vanbaalenii PYR-1
Mycobacterium flavescens PYR-GCK
Mycobacterium smegmatis str. MC2 155
Mycobacterium abscessus ATCC 19977	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
rplJ	Mycobacterium tuberculosis H37Rv Gene: Rv0651: LSU ribosomal protein L10p (P0)	Mycobacterium leprae TN Gene: ML1896: LSU ribosomal protein L10p (P0)	Mycobacterium marinum M Gene: MMAR_0990: LSU ribosomal protein L10p (P0)	Mycobacterium avium 104 Gene: MAV_4508: LSU ribosomal protein L10p (P0)	Mycobacterium sp. JLS Gene: Mjls_0994: LSU ribosomal protein L10p (P0)	Mycobacterium vanbaalenii PYR-1 Gene: Mvan_1252: LSU ribosomal protein L10p (P0)	Mycobacterium flavescens PYR-GCK Gene: Mflv_5101: LSU ribosomal protein L10p (P0)	Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_1364: LSU ribosomal protein L10p (P0)	* Mycobacterium abscessus ATCC 19977 Site: position = -235 score = 16.69 sequence = GTAACCTAATCCAGC... Gene: MAB_3877c: LSU ribosomal protein L10p (P0)	LSU ribosomal protein L10p (P0)
rplL	Mycobacterium tuberculosis H37Rv Gene: Rv0652: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium leprae TN Gene: ML1895: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium marinum M Gene: MMAR_0991: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium avium 104 Gene: MAV_4507: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium sp. JLS Gene: Mjls_0995: LSU ribosomal protein L7/L12 (P1/P2)	2 Mycobacterium vanbaalenii PYR-1 Gene: Mvan_0786: LSU ribosomal protein L7/L12 (P1/P2) Gene: Mvan_1253: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium flavescens PYR-GCK Gene: Mflv_5100: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium smegmatis str. MC2 155 Gene: MSMEG_1365: LSU ribosomal protein L7/L12 (P1/P2)	Mycobacterium abscessus ATCC 19977 Gene: MAB_3876c: LSU ribosomal protein L7/L12 (P1/P2)	LSU ribosomal protein L7/L12 (P1/P2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog L10_leader - Mycobacteriaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --