Regulog ykkC-yxkD - Mycobacteriaceae

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Mycobacterium tuberculosis H37Rv
Mycobacterium leprae TN
Mycobacterium marinum M
Mycobacterium avium 104	1	1
Mycobacterium sp. JLS
Mycobacterium vanbaalenii PYR-1	1	1
Mycobacterium flavescens PYR-GCK	1	1
Mycobacterium smegmatis str. MC2 155
Mycobacterium abscessus ATCC 19977

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
MAV_2141	Mycobacterium tuberculosis H37Rv	Mycobacterium leprae TN	Mycobacterium marinum M	* Mycobacterium avium 104 Site: position = -148 score = 50.31 sequence = TCCCGACAGCGCCTA... Gene: MAV_2141: Hypothetical protein	Mycobacterium sp. JLS	Mycobacterium vanbaalenii PYR-1	Mycobacterium flavescens PYR-GCK	Mycobacterium smegmatis str. MC2 155	Mycobacterium abscessus ATCC 19977	Hypothetical protein

CRON 2.
COG4402	Mycobacterium tuberculosis H37Rv	Mycobacterium leprae TN	Mycobacterium marinum M	Mycobacterium avium 104	Mycobacterium sp. JLS Gene: Mjls_0642: Putative sodium-solute symporter	* Mycobacterium vanbaalenii PYR-1 Site: position = -132 score = 63.6 sequence = TGGGGCGCGCCTAGG... Gene: Mvan_0815: Putative sodium-solute symporter	* Mycobacterium flavescens PYR-GCK Site: position = -151 score = 59.0 sequence = TGTGGGGCGCGTCTA... Gene: Mflv_0093: Putative sodium-solute symporter	Mycobacterium smegmatis str. MC2 155	Mycobacterium abscessus ATCC 19977	Putative sodium-solute symporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --