Regulog Trp_leader - Rhizobiales

Properties
Regulator type:	RNA regulatory element
Name:	Trp_leader
RFAM:	RF00513
Regulation mode:
Biological process:	Tryptophan biosynthesis
Effector:
Phylum:	Proteobacteria

Member of regulog collections

By taxonomy - Rhizobiales
By RNA motif - Trp_leader
By pathway - Tryptophan biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Sinorhizobium meliloti 1021
Rhizobium sp. NGR234
Rhizobium leguminosarum bv. viciae 3841
Rhizobium etli CFN 42
Agrobacterium tumefaciens str. C58 (Cereon)	1	1
Mesorhizobium sp. BNC1	1	1
Mesorhizobium loti MAFF303099	1	1
Brucella melitensis 16M	1	1
Bartonella quintana str. Toulouse
Rhodopseudomonas palustris CGA009	1	1
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Nitrobacter winogradskyi Nb-255
Azorhizobium caulinodans ORS 571
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
trpEG	Sinorhizobium meliloti 1021 Gene: SMc02725: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Rhizobium sp. NGR234 Gene: NGR_c23510: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Rhizobium leguminosarum bv. viciae 3841 Gene: RL3521: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Rhizobium etli CFN 42 Gene: RHE_CH03075: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -137 score = 18.01 sequence = ACTGGTGGTGGAGCA... Gene: Atu2289: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	* Mesorhizobium sp. BNC1 Site: position = -138 score = 16.06 sequence = AAAGCTTTGGTGGTG... Gene: Meso_2199: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	* Mesorhizobium loti MAFF303099 Site: position = -135 score = 19.29 sequence = CCATTTGGTGGTGGG... Gene: mlr2774: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	* Brucella melitensis 16M Site: position = -184 score = 20.69 sequence = ACGGTTGGTGGTGGG... Gene: BMEI0449: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Bartonella quintana str. Toulouse	* Rhodopseudomonas palustris CGA009 Site: position = -138 score = 19.37 sequence = ACGTCGTTGGTGGCG... Gene: RPA4498: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Bradyrhizobium japonicum USDA 110 Gene: blr2489: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Bradyrhizobium sp. BTAi1 Gene: BBta_2309: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Nitrobacter winogradskyi Nb-255 Gene: Nwi_2614: Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb	Azorhizobium caulinodans ORS 571	Xanthobacter autotrophicus Py2	Anthranilate synthase, aminase component (EC 4.1.3.27) / Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # TrpAa/TrpAb@PabAb

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Trp_leader - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --