Regulog yybP-ykoY - Rhizobiales
| Regulator type: | RNA regulatory element |
| Name: | yybP-ykoY |
| RFAM: | RF00080 |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - yybP-ykoY
| Genome | Genes | Operons |
|---|---|---|
| Sinorhizobium meliloti 1021 | ||
| Rhizobium sp. NGR234 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium etli CFN 42 | ||
| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Mesorhizobium sp. BNC1 | 1 | 1 |
| Mesorhizobium loti MAFF303099 | ||
| Brucella melitensis 16M | ||
| Bartonella quintana str. Toulouse | ||
| Rhodopseudomonas palustris CGA009 | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | 1 | 1 |
| Nitrobacter winogradskyi Nb-255 | ||
| Azorhizobium caulinodans ORS 571 | ||
| Xanthobacter autotrophicus Py2 | 1 | 1 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| COG1971 |
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Mesorhizobium sp. BNC1 Site: position = -311 score = 34.81 sequence = CTCCCGGCCAATCAG... Gene: Meso_4106: protein of unknown function DUF204 |
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Bradyrhizobium sp. BTAi1 Site: position = -177 score = 50.12 sequence = TCTCTTCCGCATCGG... Gene: BBta_7389: protein of unknown function DUF204 |
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Xanthobacter autotrophicus Py2 Site: position = -174 score = 33.91 sequence = TCCCCCTCTCATCGG... Gene: Xaut_4096: protein of unknown function DUF204 |
protein of unknown function DUF204 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |