Regulog L19_leader - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | L19_leader |
| RFAM: | RF00556 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - L19_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 1 | 1 |
| Staphylococcus capitis SK14 | 1 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 1 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 1 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 1 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 1 | 1 |
| Macrococcus caseolyticus JCSC5402 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| rplS |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -61 score = 38.57 sequence = CTATGATCCGCTGCT... Gene: SA1084: LSU ribosomal protein L19p |
*
Staphylococcus capitis SK14 Site: position = -63 score = 39.28 sequence = CACTATGATCCGCTG... Gene: STACA0001_0581: LSU ribosomal protein L19p |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -61 score = 39.28 sequence = CTATGATCCGCTGCT... Gene: SE0916: LSU ribosomal protein L19p |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -61 score = 37.29 sequence = CTATGATCCGCTGCT... Gene: Sca_0866: LSU ribosomal protein L19p |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -62 score = 38.72 sequence = CACTATGATCCGCTG... Gene: SH1673: LSU ribosomal protein L19p |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -62 score = 38.77 sequence = CACTATGATCCGCTG... Gene: SSP1526: LSU ribosomal protein L19p |
*
Macrococcus caseolyticus JCSC5402 Site: position = -52 score = 29.64 sequence = CTATGATCCGCTGAG... Gene: MCCL_0824: LSU ribosomal protein L19p |
LSU ribosomal protein L19p |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |