Regulog L10_leader - Bacillales
| Regulator type: | RNA regulatory element |
| Name: | L10_leader |
| RFAM: | RF00557 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Bacillales
- By RNA motif - L10_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 2 | 1 |
| Bacillus amyloliquefaciens FZB42 | 2 | 1 |
| Bacillus pumilus SAFR-032 | 2 | 1 |
| Bacillus licheniformis DSM 13 | 2 | 1 |
| Anoxybacillus flavithermus WK1 | 2 | 1 |
| Geobacillus kaustophilus HTA426 | 2 | 1 |
| Bacillus cereus ATCC 14579 | 2 | 1 |
| Bacillus halodurans C-125 | 2 | 1 |
| Bacillus clausii KSM-K16 | 2 | 1 |
| Oceanobacillus iheyensis HTE831 | 2 | 1 |
| Paenibacillus sp. JDR-2 | 2 | 1 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| rplJ |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -205 score = 89.47 sequence = ATAGAATATCATTTA... Gene: BSU01040: 50S ribosomal protein L10 |
*
Bacillus amyloliquefaciens FZB42 Site: position = -205 score = 94.14 sequence = ATAATATGTCATTTA... Gene: RBAM_001290: 50S ribosomal protein L10 |
*
Bacillus pumilus SAFR-032 Site: position = -209 score = 76.09 sequence = GAATATGTCCATTTA... Gene: BPUM_0089: 50S ribosomal protein L10 |
*
Bacillus licheniformis DSM 13 Site: position = -210 score = 83.99 sequence = AAATATGTCCATTTA... Gene: BLi00122: 50S ribosomal protein L10 |
*
Anoxybacillus flavithermus WK1 Site: position = -134 score = 82.97 sequence = AGCGAATATCATTTG... Gene: Aflv_0094: 50S ribosomal protein L10 |
*
Geobacillus kaustophilus HTA426 Site: position = -210 score = 80.95 sequence = AATGAATATCATTTG... Gene: GK0095: 50S ribosomal protein L10 |
*
Bacillus cereus ATCC 14579 Site: position = -183 score = 78.59 sequence = TGAATTTAATTAGTG... Gene: BC0119: 50S ribosomal protein L10 |
*
Bacillus halodurans C-125 Site: position = -178 score = 83.55 sequence = ACAGGCGTTGAAACA... Gene: BH0121: 50S ribosomal protein L10 |
*
Bacillus clausii KSM-K16 Site: position = -175 score = 85.99 sequence = GAAATAGAATAGTCA... Gene: ABC0139: 50S ribosomal protein L10 |
*
Oceanobacillus iheyensis HTE831 Site: position = -219 score = 86.09 sequence = AAAAAGAATACGTTA... Gene: OB0109: 50S ribosomal protein L10 |
*
Paenibacillus sp. JDR-2 Site: position = -214 score = 68.36 sequence = TAACATTCGAATACG... Gene: Pjdr2_5694: 50S ribosomal protein L10 |
50S ribosomal protein L10 |
| rplL |
Gene: BSU01050: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: RBAM_001300: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: BPUM_0090: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: BLi00123: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: Aflv_0095: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: GK0096: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: BC0120: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: BH0122: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: ABC0140: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: OB0110: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: Pjdr2_5693: LSU ribosomal protein L7/L12 (P1/P2) |
LSU ribosomal protein L7/L12 (P1/P2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |