Regulog L10_leader - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | L10_leader |
| RFAM: | RF00557 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - L10_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 2 | 1 |
| Staphylococcus capitis SK14 | 2 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 2 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 2 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 2 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 2 | 1 |
| Macrococcus caseolyticus JCSC5402 | 2 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| rplJ |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -183 score = 72.05 sequence = TTATTGTGATTATTT... Gene: SA0497: LSU ribosomal protein L10p (P0) |
*
Staphylococcus capitis SK14 Site: position = -187 score = 79.7 sequence = ATTAATTGTGATTAT... Gene: STACA0001_0494: LSU ribosomal protein L10p (P0) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -186 score = 78.36 sequence = TACTTGTGATTATTT... Gene: SE0303: LSU ribosomal protein L10p (P0) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -195 score = 69.66 sequence = TTAATGTGATTATTT... Gene: Sca_0195: LSU ribosomal protein L10p (P0) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -191 score = 71.31 sequence = ATTTATTGTGATTAT... Gene: SH2468: LSU ribosomal protein L10p (P0) |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -227 score = 73.64 sequence = TGGTTAATGTATTAT... Gene: SSP2216: LSU ribosomal protein L10p (P0) |
*
Macrococcus caseolyticus JCSC5402 Site: position = -164 score = 74.31 sequence = ATTTGTATTTTATAA... Gene: MCCL_1869: LSU ribosomal protein L10p (P0) |
LSU ribosomal protein L10p (P0) |
| rplL |
Gene: SA0498: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: STACA0001_0493: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: SE0304: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: Sca_0196: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: SH2467: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: SSP2215: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: MCCL_1868: LSU ribosomal protein L7/L12 (P1/P2) |
LSU ribosomal protein L7/L12 (P1/P2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |