Regulog L10_leader - Staphylococcaceae

Properties
Regulator type:	RNA regulatory element
Name:	L10_leader
RFAM:	RF00557
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Staphylococcaceae
By RNA motif - L10_leader
By pathway - Ribosome biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Staphylococcus aureus subsp. aureus N315	2	1
Staphylococcus capitis SK14	2	1
Staphylococcus epidermidis ATCC 12228	2	1
Staphylococcus carnosus subsp. carnosus TM300	2	1
Staphylococcus haemolyticus JCSC1435	2	1
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	2	1
Macrococcus caseolyticus JCSC5402	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes								Function

CRON 1.
rplJ	* Staphylococcus aureus subsp. aureus N315 Site: position = -183 score = 72.05 sequence = TTATTGTGATTATTT... Gene: SA0497: LSU ribosomal protein L10p (P0)	* Staphylococcus capitis SK14 Site: position = -187 score = 79.7 sequence = ATTAATTGTGATTAT... Gene: STACA0001_0494: LSU ribosomal protein L10p (P0)	* Staphylococcus epidermidis ATCC 12228 Site: position = -186 score = 78.36 sequence = TACTTGTGATTATTT... Gene: SE0303: LSU ribosomal protein L10p (P0)	* Staphylococcus carnosus subsp. carnosus TM300 Site: position = -195 score = 69.66 sequence = TTAATGTGATTATTT... Gene: Sca_0195: LSU ribosomal protein L10p (P0)	* Staphylococcus haemolyticus JCSC1435 Site: position = -191 score = 71.31 sequence = ATTTATTGTGATTAT... Gene: SH2468: LSU ribosomal protein L10p (P0)	* Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -227 score = 73.64 sequence = TGGTTAATGTATTAT... Gene: SSP2216: LSU ribosomal protein L10p (P0)	* Macrococcus caseolyticus JCSC5402 Site: position = -164 score = 74.31 sequence = ATTTGTATTTTATAA... Gene: MCCL_1869: LSU ribosomal protein L10p (P0)	LSU ribosomal protein L10p (P0)
rplL	Staphylococcus aureus subsp. aureus N315 Gene: SA0498: LSU ribosomal protein L7/L12 (P1/P2)	Staphylococcus capitis SK14 Gene: STACA0001_0493: LSU ribosomal protein L7/L12 (P1/P2)	Staphylococcus epidermidis ATCC 12228 Gene: SE0304: LSU ribosomal protein L7/L12 (P1/P2)	Staphylococcus carnosus subsp. carnosus TM300 Gene: Sca_0196: LSU ribosomal protein L7/L12 (P1/P2)	Staphylococcus haemolyticus JCSC1435 Gene: SH2467: LSU ribosomal protein L7/L12 (P1/P2)	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP2215: LSU ribosomal protein L7/L12 (P1/P2)	Macrococcus caseolyticus JCSC5402 Gene: MCCL_1868: LSU ribosomal protein L7/L12 (P1/P2)	LSU ribosomal protein L7/L12 (P1/P2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog L10_leader - Staphylococcaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --