Regulog sucA - Ralstonia
| Regulator type: | RNA regulatory element |
| Name: | sucA |
| RFAM: | RF01070 |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Ralstonia
- By RNA motif - sucA
- By pathway - Tricarboxylic acid cycle
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | 3 | 1 |
| Ralstonia pickettii 12J | 3 | 1 |
| Ralstonia metallidurans CH34 | 3 | 1 |
| Ralstonia eutropha JMP134 | 3 | 1 |
| Ralstonia eutropha H16 | 3 | 1 |
| Cupriavidus taiwanensis | 3 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| sucA |
*
Ralstonia solanacearum GMI1000 Site: position = -86 score = 77.77 sequence = TGCGATCCGCTAACC... Gene: RSc1269: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Ralstonia pickettii 12J Site: position = -86 score = 78.26 sequence = TGCGATCCGCTAACC... Gene: Rpic_1097: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Ralstonia metallidurans CH34 Site: position = -88 score = 75.99 sequence = TTTGCAATCCGCTAA... Gene: Rmet_2050: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Ralstonia eutropha JMP134 Site: position = -88 score = 80.04 sequence = TTTGCGATCCGCTAA... Gene: Reut_A2047: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Ralstonia eutropha H16 Site: position = -88 score = 76.7 sequence = TTTGCGATCCGCTAA... Gene: H16_A2325: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
*
Cupriavidus taiwanensis Site: position = -88 score = 79.26 sequence = TTTGCGATCCGCTAA... Gene: RALTA_A1870: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) |
| sucB |
Gene: RSc1270: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Rpic_1098: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Rmet_2049: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: Reut_A2046: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: H16_A2324: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Gene: RALTA_A1869: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) |
| lpdA |
Gene: RS02809: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Rpic_1099: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Rmet_2048: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: Reut_A2045: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: H16_A2323: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Gene: RALTA_A1868: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |