Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog sucA - Ralstonia

Properties
Regulator type: RNA regulatory element
Name: sucA
RFAM: RF01070
Regulation mode:
Biological process: Tricarboxylic acid cycle
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Ralstonia solanacearum GMI1000 3 1
Ralstonia pickettii 12J 3 1
Ralstonia metallidurans CH34 3 1
Ralstonia eutropha JMP134 3 1
Ralstonia eutropha H16 3 1
Cupriavidus taiwanensis 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
sucA
*
Ralstonia solanacearum GMI1000

Site:
position = -86
score = 77.77
sequence = TGCGATCCGCTAACC...

Gene: RSc1269: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
*
Ralstonia pickettii 12J

Site:
position = -86
score = 78.26
sequence = TGCGATCCGCTAACC...

Gene: Rpic_1097: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
*
Ralstonia metallidurans CH34

Site:
position = -88
score = 75.99
sequence = TTTGCAATCCGCTAA...

Gene: Rmet_2050: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
*
Ralstonia eutropha JMP134

Site:
position = -88
score = 80.04
sequence = TTTGCGATCCGCTAA...

Gene: Reut_A2047: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
*
Ralstonia eutropha H16

Site:
position = -88
score = 76.7
sequence = TTTGCGATCCGCTAA...

Gene: H16_A2325: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
*
Cupriavidus taiwanensis

Site:
position = -88
score = 79.26
sequence = TTTGCGATCCGCTAA...

Gene: RALTA_A1870: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
sucB
 
Ralstonia solanacearum GMI1000

Gene: RSc1270: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Ralstonia pickettii 12J

Gene: Rpic_1098: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Ralstonia metallidurans CH34

Gene: Rmet_2049: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Ralstonia eutropha JMP134

Gene: Reut_A2046: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Ralstonia eutropha H16

Gene: H16_A2324: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
 
Cupriavidus taiwanensis

Gene: RALTA_A1869: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
lpdA
 
Ralstonia solanacearum GMI1000

Gene: RS02809: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
 
Ralstonia pickettii 12J

Gene: Rpic_1099: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
 
Ralstonia metallidurans CH34

Gene: Rmet_2048: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
 
Ralstonia eutropha JMP134

Gene: Reut_A2045: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
 
Ralstonia eutropha H16

Gene: H16_A2323: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
 
Cupriavidus taiwanensis

Gene: RALTA_A1868: Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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