Regulog ykkC-yxkD - Ralstonia
| Regulator type: | RNA regulatory element |
| Name: | ykkC-yxkD |
| RFAM: | RF00442 |
| Regulation mode: | |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Ralstonia
- By RNA motif - ykkC-yxkD
- By pathway - Multidrug resistance
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | ||
| Ralstonia pickettii 12J | ||
| Ralstonia metallidurans CH34 | ||
| Ralstonia eutropha JMP134 | 8 | 2 |
| Ralstonia eutropha H16 | ||
| Cupriavidus taiwanensis |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| Reut_B3481 |
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*
Ralstonia eutropha JMP134 Site: position = -170 score = 73.97 sequence = ACCGAAGGGTAGCTA... Gene: Reut_B3481: Hypothetical protein |
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Hypothetical protein |
| CRON 2. | |||||||
| uctB |
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*
Ralstonia eutropha JMP134 Site: position = -175 score = 76.16 sequence = ACCGAAGGGTCGCTA... Gene: Reut_B4888: Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein |
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Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein |
| uctP |
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Gene: Reut_B4887: Urea carboxylase-related ABC transporter, permease protein |
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Urea carboxylase-related ABC transporter, permease protein |
| uctA |
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Gene: Reut_B4886: Urea carboxylase-related ABC transporter, ATPase protein |
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Urea carboxylase-related ABC transporter, ATPase protein |
| amt1 |
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Gene: Reut_B4885: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) |
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Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) |
| amt2 |
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Gene: Reut_B4884: Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) |
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Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) |
| ucaA |
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Gene: Reut_B4883: Urea carboxylase (EC 6.3.4.6) |
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Urea carboxylase (EC 6.3.4.6) |
| ucaB |
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Gene: Reut_B4882: Allophanate hydrolase (EC 3.5.1.54) |
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Allophanate hydrolase (EC 3.5.1.54) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |