Regulog ykkC-yxkD - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | ykkC-yxkD |
| RFAM: | RF00442 |
| Regulation mode: | |
| Biological process: | Multidrug resistance |
| Effector: | |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - ykkC-yxkD
- By pathway - Multidrug resistance
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | ||
| Staphylococcus capitis SK14 | ||
| Staphylococcus epidermidis ATCC 12228 | ||
| Staphylococcus carnosus subsp. carnosus TM300 | ||
| Staphylococcus haemolyticus JCSC1435 | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 2 | 1 |
| Macrococcus caseolyticus JCSC5402 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| ykkC |
|
Gene: STACA0001_1189: Quaternary ammonium compound-resistance protein sugE |
Gene: SE1877: Quaternary ammonium compound-resistance protein sugE |
Gene: Sca_1795: Quaternary ammonium compound-resistance protein sugE |
Gene: SH0754: Quaternary ammonium compound-resistance protein sugE |
*2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP0608: Quaternary ammonium compound-resistance protein sugE Site: position = -253 score = 88.2 sequence = GAATAAAGCTTTCTA... Gene: SSP2343: Quaternary ammonium compound-resistance protein sugE |
Gene: MCCL_1353: Quaternary ammonium compound-resistance protein sugE |
Quaternary ammonium compound-resistance protein sugE |
| ykkD |
|
Gene: STACA0001_1188: Quaternary ammonium compound-resistance protein sugE |
Gene: SE1878: Quaternary ammonium compound-resistance protein sugE |
Gene: Sca_1796: Quaternary ammonium compound-resistance protein sugE |
Gene: SH0753: Quaternary ammonium compound-resistance protein sugE |
2
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Gene: SSP2342: Quaternary ammonium compound-resistance protein sugE Gene: SSP0607: Quaternary ammonium compound-resistance protein sugE |
Gene: MCCL_1352: Quaternary ammonium compound-resistance protein sugE |
Quaternary ammonium compound-resistance protein sugE |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |