Regulog yybP-ykoY - Cyanobacteria
| Regulator type: | RNA regulatory element |
| Name: | yybP-ykoY |
| RFAM: | RF00080 |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Cyanobacteria |
Member of regulog collections
- By taxonomy - Cyanobacteria
- By RNA motif - yybP-ykoY
| Genome | Genes | Operons |
|---|---|---|
| Synechococcus sp. PCC 7002 | ||
| Synechocystis sp. PCC 6803 | ||
| Cyanothece sp. ATCC 51142 | ||
| Cyanothece sp. PCC 8801 | ||
| Cyanothece sp. PCC 7425 | ||
| Microcystis aeruginosa NIES-843 | ||
| Nostoc sp. PCC 7120 | 1 | 1 |
| Trichodesmium erythraeum IMS101 | ||
| Synechococcus elongatus PCC 7942 | ||
| Prochlorococcus marinus str. MIT 9313 | ||
| Synechococcus sp. JA-3-3Ab | 2 | 2 |
| Synechococcus sp. WH 8102 | ||
| Gloeobacter violaceus PCC 7421 | 1 | 1 |
| Thermosynechococcus elongatus BP-1 |
| Genes | Function | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||
| COG2119 |
|
Gene: sll0615: Transmembrane protein, COG2119 |
|
|
Gene: Cyan7425_1416: Transmembrane protein, COG2119 |
|
*
Nostoc sp. PCC 7120 Site: position = -201 score = 48.17 sequence = TCTGATAAGAAGGGG... Gene: alr1698: Transmembrane protein, COG2119 |
|
Gene: Synpcc7942_1990: Transmembrane protein, COG2119 |
|
*2
Synechococcus sp. JA-3-3Ab Site: position = -227 score = 57.86 sequence = ATTCAGGCTAGAAAG... Gene: CYA_0706: Transmembrane protein, COG2119 Site: position = -227 score = 58.93 sequence = CATTCAGACGGAAAG... Gene: CYA_0678: Transmembrane protein, COG2119 |
|
|
Gene: tlr0379: Transmembrane protein, COG2119 |
Transmembrane protein, COG2119 |
| CRON 2. | |||||||||||||||
| ykoY |
|
|
|
|
|
|
|
|
|
|
|
|
*
Gloeobacter violaceus PCC 7421 Site: position = -125 score = 52.64 sequence = TAGAGATGGATGGGG... Gene: glr4409: Membrane protein TerC, possibly involved in tellurium resistance |
|
Membrane protein TerC, possibly involved in tellurium resistance |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |