Regulog yybP-ykoY - Ralstonia
| Regulator type: | RNA regulatory element |
| Name: | yybP-ykoY |
| RFAM: | RF00080 |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria |
| Genome | Genes | Operons |
|---|---|---|
| Ralstonia solanacearum GMI1000 | 1 | 1 |
| Ralstonia pickettii 12J | 3 | 3 |
| Ralstonia metallidurans CH34 | 1 | 1 |
| Ralstonia eutropha JMP134 | 1 | 1 |
| Ralstonia eutropha H16 | 1 | 1 |
| Cupriavidus taiwanensis | 1 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| ykoY |
*
Ralstonia solanacearum GMI1000 Site: position = -215 score = 74.47 sequence = CGACTTCCTCAAAGG... Gene: RS04438: Membrane protein TerC, possibly involved in tellurium resistance |
*
Ralstonia pickettii 12J Site: position = -221 score = 76.33 sequence = GGACTTCCTCAAAGG... Gene: Rpic_0820: Membrane protein TerC, possibly involved in tellurium resistance |
*
Ralstonia metallidurans CH34 Site: position = -258 score = 62.08 sequence = GGGAAGTTAAAGGGG... Gene: Rmet_2567: Membrane protein TerC, possibly involved in tellurium resistance |
*
Ralstonia eutropha JMP134 Site: position = -231 score = 68.83 sequence = GCGTCCCTTCAAAGG... Gene: Reut_A0916: Membrane protein TerC, possibly involved in tellurium resistance |
*
Ralstonia eutropha H16 Site: position = -233 score = 73.3 sequence = TGTCCCTCAAAGGGG... Gene: H16_A2702: Membrane protein TerC, possibly involved in tellurium resistance |
*
Cupriavidus taiwanensis Site: position = -230 score = 72.48 sequence = TGTCCCTCAAAGGGG... Gene: RALTA_A2193: Membrane protein TerC, possibly involved in tellurium resistance |
Membrane protein TerC, possibly involved in tellurium resistance |
| CRON 2. | |||||||
| COG0530 |
|
*2
Ralstonia pickettii 12J Site: position = -210 score = 50.15 sequence = GCCCGTTGTCATTGG... Gene: Rpic_1664: Sodium/calcium exchanger family membrane protein, COG0530 Site: position = -208 score = 50.15 sequence = CCGTTGTCATTGGGG... Gene: Rpic_2952: Sodium/calcium exchanger family membrane protein, COG0530 |
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Sodium/calcium exchanger family membrane protein, COG0530 |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |