Regulog glmS - Bacillales
| Regulator type: | RNA regulatory element |
| Name: | glmS |
| RFAM: | RF00234 |
| Regulation mode: | |
| Biological process: | Amino sugar metabolism |
| Effector: | Glucosamine-6-phosphate |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Bacillales
- By RNA motif - glmS
- By effector - Glucosamine-6-phosphate
- By pathway - Amino sugar metabolism
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 1 | 1 |
| Bacillus amyloliquefaciens FZB42 | 1 | 1 |
| Bacillus pumilus SAFR-032 | 1 | 1 |
| Bacillus licheniformis DSM 13 | 1 | 1 |
| Anoxybacillus flavithermus WK1 | 1 | 1 |
| Geobacillus kaustophilus HTA426 | 1 | 1 |
| Bacillus cereus ATCC 14579 | 1 | 1 |
| Bacillus halodurans C-125 | 1 | 1 |
| Bacillus clausii KSM-K16 | 1 | 1 |
| Oceanobacillus iheyensis HTE831 | 1 | 1 |
| Paenibacillus sp. JDR-2 | 1 | 1 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| glmS |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -259 score = 136.06 sequence = CTATAATTATAGCGC... Gene: BSU01780: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -260 score = 131.7 sequence = TTATAATTACAGCGC... Gene: RBAM_002320: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Bacillus pumilus SAFR-032 Site: position = -269 score = 129.41 sequence = TTATAATTATAGCGC... Gene: BPUM_0165: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Bacillus licheniformis DSM 13 Site: position = -268 score = 134.03 sequence = TTATAGTTATAGCGC... Gene: BLi00204: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Anoxybacillus flavithermus WK1 Site: position = -233 score = 139.16 sequence = GTTTCACAAAAGCGC... Gene: Aflv_0152: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Geobacillus kaustophilus HTA426 Site: position = -296 score = 134.86 sequence = ACGAGACAAAAGCGC... Gene: GK0155: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Bacillus cereus ATCC 14579 Site: position = -346 score = 120.06 sequence = AAATTATAAAAGCGC... Gene: BC0190: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Bacillus halodurans C-125 Site: position = -241 score = 125.85 sequence = TGACAGTTGAAGCGC... Gene: BH0268: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Bacillus clausii KSM-K16 Site: position = -224 score = 114.56 sequence = CATACACCAAAGCGC... Gene: ABC0245: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Oceanobacillus iheyensis HTE831 Site: position = -321 score = 129.34 sequence = TATAATCAAAAGCGC... Gene: OB0235: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Paenibacillus sp. JDR-2 Site: position = -376 score = 67.59 sequence = TCACGTTTTATAAGC... Gene: Pjdr2_5628: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |