Regulog glmS - Staphylococcaceae
| Regulator type: | RNA regulatory element |
| Name: | glmS |
| RFAM: | RF00234 |
| Regulation mode: | |
| Biological process: | Amino sugar metabolism |
| Effector: | Glucosamine-6-phosphate |
| Phylum: | Firmicutes |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By RNA motif - glmS
- By effector - Glucosamine-6-phosphate
- By pathway - Amino sugar metabolism
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 1 | 1 |
| Staphylococcus capitis SK14 | 1 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 1 | 1 |
| Staphylococcus carnosus subsp. carnosus TM300 | 1 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 1 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 1 | 1 |
| Macrococcus caseolyticus JCSC5402 | 1 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| glmS |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -419 score = 126.0 sequence = CAGTACAGTTAAAGC... Gene: SA1959: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Staphylococcus capitis SK14 Site: position = -386 score = 114.96 sequence = ATAAATAGTTATAGC... Gene: STACA0001_0856: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -387 score = 125.01 sequence = ATTAATAATTAAAGC... Gene: SE1751: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -413 score = 103.6 sequence = AGATATAATTATAGC... Gene: Sca_1657: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -384 score = 114.16 sequence = TAAATTATAAAGCGC... Gene: SH0880: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -391 score = 121.11 sequence = GTTCAATTAAAGCGC... Gene: SSP0729: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Macrococcus caseolyticus JCSC5402 Site: position = -206 score = 98.61 sequence = CTGAATATACAGCGC... Gene: MCCL_0324: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |