Regulog ArgR - Psychromonadaceae/Aeromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	ArgR
Regulation mode:	repressor (activator)
Biological process:	Arginine degradation; Arginine biosynthesis
Effector:	Arginine
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 65 sites [see more]

Member of regulog collections

By trascription factor - ArgR
By taxonomy - Psychromonadaceae/Aeromonadales
By TF family - ArgR
By effector - Arginine
By pathway - Arginine degradation
By pathway - Arginine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Psychromonas ingrahamii 37	14	7
Psychromonas sp. CNPT3	6	4
Moritella sp. PE36	12	5
Aeromonas hydrophila subsp. hydrophila ATCC 7966	17	7
Aeromonas salmonicida subsp. salmonicida A449	17	7
Tolumonas auensis DSM 9187	10	6

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes							Function

CRON 1.
argW	Psychromonas ingrahamii 37 Gene: Ping_1392: Predicted arginine uptake transporter, COG3314 family	* Psychromonas sp. CNPT3 Site: position = -141 score = 4.66725 sequence = AGTGCATATTTATGCAGA Gene: PCNPT3_05594: Predicted arginine uptake transporter, COG3314 family	Moritella sp. PE36	Aeromonas hydrophila subsp. hydrophila ATCC 7966	Aeromonas salmonicida subsp. salmonicida A449	Tolumonas auensis DSM 9187	Predicted arginine uptake transporter, COG3314 family
marC	Psychromonas ingrahamii 37 Gene: Ping_1391: Membrane protein, MarC family	Psychromonas sp. CNPT3 Gene: PCNPT3_05589: Membrane protein, MarC family	Moritella sp. PE36	Aeromonas hydrophila subsp. hydrophila ATCC 7966	Aeromonas salmonicida subsp. salmonicida A449	Tolumonas auensis DSM 9187	Membrane protein, MarC family

CRON 2.
argC	* Psychromonas ingrahamii 37 Site: position = -164 score = 4.11999 sequence = ACTGCTTTAATAAGCTAT Site: position = -92 score = 4.96907 sequence = ATTGCATAAATAATCAAA Gene: Ping_0228: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Psychromonas sp. CNPT3	* Moritella sp. PE36 Site: position = -200 score = 4.48271 sequence = GTTGCATAAAAATGTAAT Site: position = -221 score = 4.19641 sequence = ATTGTTTTTTTATGCATA Gene: PE36_14821: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -234 score = 3.86733 sequence = AGAAAATACAAATGCAAA Site: position = -213 score = 4.30334 sequence = AGTGCATGAATATTCTGT Gene: AHA_0593: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -244 score = 3.86733 sequence = AGAAAATACAAATGCAAA Site: position = -223 score = 4.99872 sequence = AGTGCATTAATATTCTTT Gene: ASA_0578: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	* Tolumonas auensis DSM 9187 Site: position = -37 score = 4.10145 sequence = TATGAATTAATCTGAATT Site: position = -189 score = 4.81061 sequence = AATGCATAAATATTAACT Site: position = -210 score = 3.88325 sequence = AAATAATAGAAATGCAAT Gene: Tola_0094: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
argB	Psychromonas ingrahamii 37 Gene: Ping_0229: Acetylglutamate kinase (EC 2.7.2.8)	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_14816: Acetylglutamate kinase (EC 2.7.2.8)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0594: Acetylglutamate kinase (EC 2.7.2.8)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0579: Acetylglutamate kinase (EC 2.7.2.8)	Tolumonas auensis DSM 9187 Gene: Tola_0095: Acetylglutamate kinase (EC 2.7.2.8)	Acetylglutamate kinase (EC 2.7.2.8)
argF	Psychromonas ingrahamii 37 Gene: Ping_0230: Ornithine carbamoyltransferase (EC 2.1.3.3)	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_14811: Ornithine carbamoyltransferase (EC 2.1.3.3)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0595: Ornithine carbamoyltransferase (EC 2.1.3.3)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0580: Ornithine carbamoyltransferase (EC 2.1.3.3)	Tolumonas auensis DSM 9187 Gene: Tola_0096: Ornithine carbamoyltransferase (EC 2.1.3.3)	Ornithine carbamoyltransferase (EC 2.1.3.3)
argG	Psychromonas ingrahamii 37 Gene: Ping_0231: Argininosuccinate synthase (EC 6.3.4.5)	* Psychromonas sp. CNPT3 Site: position = -339 score = 4.50275 sequence = TGTAAATAGTTATTCATT Site: position = -93 score = 4.29325 sequence = TTTGCATGTTTATGCAGT Gene: PCNPT3_02720: Argininosuccinate synthase (EC 6.3.4.5)	Moritella sp. PE36 Gene: PE36_14806: Argininosuccinate synthase (EC 6.3.4.5)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0596: Argininosuccinate synthase (EC 6.3.4.5)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0581: Argininosuccinate synthase (EC 6.3.4.5)	* Tolumonas auensis DSM 9187 Site: position = -265 score = 4.48664 sequence = TATGCATAAATATGCATG Gene: Tola_1484: Argininosuccinate synthase (EC 6.3.4.5)	Argininosuccinate synthase (EC 6.3.4.5)
argH	Psychromonas ingrahamii 37 Gene: Ping_0232: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)	Psychromonas sp. CNPT3 Gene: PCNPT3_02725: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)	Moritella sp. PE36 Gene: PE36_14801: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0597: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0582: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)	Tolumonas auensis DSM 9187 Gene: Tola_0097: Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)	Argininosuccinate lyase (EC 4.3.2.1) / N-acetylglutamate synthase (EC 2.3.1.1)

CRON 3.
argR	* Psychromonas ingrahamii 37 Site: position = -96 score = 4.92042 sequence = ATTGAATAGTTATGCATT Gene: Ping_0295: Arginine metabolism transcriptional regulator ArgR	* Psychromonas sp. CNPT3 Site: position = -232 score = 4.19311 sequence = ATGGCATAAATAATCTAA Site: position = -94 score = 3.94489 sequence = AGTGCATACTTATGCACC Site: position = -124 score = 3.97983 sequence = TATGCATCACTTTGCATA Gene: PCNPT3_03561: Arginine metabolism transcriptional regulator ArgR	* Moritella sp. PE36 Site: position = -253 score = 4.34895 sequence = TCAACATAAATATTCACT Site: position = -163 score = 4.83184 sequence = TATGCATAATTATTCAGT Site: position = -305 score = 4.37745 sequence = ACTGAATATAATTGCACT Gene: PE36_07657: Arginine metabolism transcriptional regulator ArgR	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -88 score = 3.821 sequence = TAGGCATATGAATGCAAA Site: position = -130 score = 4.46543 sequence = TTTGAATCAATATGCAGA Site: position = -193 score = 4.69314 sequence = ATTGAATAAGTTTTCAAA Gene: AHA_0654: Arginine metabolism transcriptional regulator ArgR	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -130 score = 4.46543 sequence = TTTGAATCAATATGCAGA Site: position = -193 score = 4.69314 sequence = ATTGAATAAGTTTTCAAA Gene: ASA_0654: Arginine metabolism transcriptional regulator ArgR	* Tolumonas auensis DSM 9187 Site: position = -90 score = 4.01323 sequence = TTTGAATATCAATTTTTA Gene: Tola_2550: Arginine metabolism transcriptional regulator ArgR	Arginine metabolism transcriptional regulator ArgR

CRON 4.
argE	* Psychromonas ingrahamii 37 Site: position = -99 score = 4.12332 sequence = ATTACATTAATACTTTCT Gene: Ping_0227: Acetylornithine deacetylase (EC 3.5.1.16)	Psychromonas sp. CNPT3	* Moritella sp. PE36 Site: position = -60 score = 4.22767 sequence = ATTACATTTTTATGCAAC Site: position = -39 score = 4.20495 sequence = TATGCATAAAAAAACAAT Gene: PE36_14826: Acetylornithine deacetylase (EC 3.5.1.16)	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -52 score = 4.33781 sequence = TTTGCATTTGTATTTTCT Site: position = -73 score = 3.9351 sequence = ACAGAATATTCATGCACT Gene: AHA_0592: Acetylornithine deacetylase (EC 3.5.1.16)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -52 score = 4.33781 sequence = TTTGCATTTGTATTTTCT Site: position = -73 score = 4.44306 sequence = AAAGAATATTAATGCACT Gene: ASA_0577: Acetylornithine deacetylase (EC 3.5.1.16)	* Tolumonas auensis DSM 9187 Site: position = -72 score = 4.57201 sequence = AGTTAATATTTATGCATT Site: position = -51 score = 4.24687 sequence = ATTGCATTTCTATTATTT Gene: Tola_0093: Acetylornithine deacetylase (EC 3.5.1.16)	Acetylornithine deacetylase (EC 3.5.1.16)

CRON 5.
argA	* Psychromonas ingrahamii 37 Site: position = -71 score = 4.71562 sequence = ATTAAATATTAATGCATT Gene: Ping_0872: N-acetylglutamate synthase (EC 2.3.1.1)	Psychromonas sp. CNPT3	* Moritella sp. PE36 Site: position = -410 score = 3.98123 sequence = ATCACATAAAAATTCAGT Gene: PE36_01437: N-acetylglutamate synthase (EC 2.3.1.1)	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -58 score = 4.64389 sequence = TGTGCATTTATTTTCATA Site: position = -79 score = 3.50302 sequence = AATCAATATTTAATCTTG Gene: AHA_2569: N-acetylglutamate synthase (EC 2.3.1.1)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -79 score = 3.87126 sequence = AATCAATATTTAGTCTTT Site: position = -58 score = 4.64389 sequence = TGTGAATTTATTTTCATA Gene: ASA_2577: N-acetylglutamate synthase (EC 2.3.1.1)	* Tolumonas auensis DSM 9187 Site: position = -98 score = 4.44161 sequence = AATACATAAAAAATCAAA Gene: Tola_2150: N-acetylglutamate synthase (EC 2.3.1.1)	N-acetylglutamate synthase (EC 2.3.1.1)

CRON 6.
carA	* Psychromonas ingrahamii 37 Site: position = -35 score = 4.52824 sequence = AATAAATTTATTTTTATT Gene: Ping_0896: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Psychromonas sp. CNPT3 Gene: PCNPT3_05359: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Moritella sp. PE36 Gene: PE36_20979: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -174 score = 4.84713 sequence = ATTGAATTTAGATGCATT Gene: AHA_2724: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -174 score = 4.84713 sequence = ATTGAATTTAGATGCATT Gene: ASA_1648: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	* Tolumonas auensis DSM 9187 Site: position = -204 score = 4.77757 sequence = TATGCATTATTTTTCATT Site: position = -225 score = 3.60104 sequence = AGTGATATTTTATGCTTA Gene: Tola_1026: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
carB	Psychromonas ingrahamii 37 Gene: Ping_0897: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Psychromonas sp. CNPT3 Gene: PCNPT3_05364: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Moritella sp. PE36 Gene: PE36_20974: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_2723: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_1649: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Tolumonas auensis DSM 9187 Gene: Tola_1027: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)

CRON 7.
proV	* Psychromonas ingrahamii 37 Site: position = -377 score = 4.17469 sequence = ATATAATTAATAAGCAAT Gene: Ping_0616: Glycine betaine/L-proline ABC transporter, ATP-binding protein	Psychromonas sp. CNPT3	Moritella sp. PE36	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -137 score = 3.81032 sequence = AATTAATTATGATTTTCT Site: position = -226 score = 4.66511 sequence = ATTGAATTTGTTTGCATT Gene: AHA_3376: Glycine betaine/L-proline ABC transporter, ATP-binding protein	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -145 score = 3.84864 sequence = TTAAAATCAATATGTTAT Gene: ASA_0933: Glycine betaine/L-proline ABC transporter, ATP-binding protein	Tolumonas auensis DSM 9187	Glycine betaine/L-proline ABC transporter, ATP-binding protein
proW	Psychromonas ingrahamii 37 Gene: Ping_0615: Glycine betaine/L-proline ABC transporter, permease protein	Psychromonas sp. CNPT3	Moritella sp. PE36	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_3375: Glycine betaine/L-proline ABC transporter, permease protein	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0934: Glycine betaine/L-proline ABC transporter, permease protein	Tolumonas auensis DSM 9187	Glycine betaine/L-proline ABC transporter, permease protein
proX	Psychromonas ingrahamii 37 Gene: Ping_0614: Glycine betaine/L-proline ABC transporter, substrate-binding protein	Psychromonas sp. CNPT3	Moritella sp. PE36	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_3374: Glycine betaine/L-proline ABC transporter, substrate-binding protein	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0935: Glycine betaine/L-proline ABC transporter, substrate-binding protein	Tolumonas auensis DSM 9187	Glycine betaine/L-proline ABC transporter, substrate-binding protein

CRON 8.
artP	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	* Moritella sp. PE36 Site: position = -167 score = 4.84235 sequence = ACTGAATAATTATGCATA Site: position = -77 score = 4.24586 sequence = AGTGAATATTTATGTTGA Site: position = -25 score = 4.16535 sequence = AGTGCAATTATATTCAGT Gene: PE36_07652: Arginine ABC transporter, ATP-binding protein	* Aeromonas hydrophila subsp. hydrophila ATCC 7966 Site: position = -131 score = 3.9584 sequence = TTTGCATTCATATGCCTA Site: position = -89 score = 4.30531 sequence = TCTGCATATTGATTCAAA Site: position = -26 score = 3.99888 sequence = TTTGAAAACTTATTCAAT Gene: AHA_0655: Arginine ABC transporter, ATP-binding protein	* Aeromonas salmonicida subsp. salmonicida A449 Site: position = -89 score = 4.30531 sequence = TCTGCATATTGATTCAAA Site: position = -26 score = 3.99888 sequence = TTTGAAAACTTATTCAAT Gene: ASA_0655: Arginine ABC transporter, ATP-binding protein	Tolumonas auensis DSM 9187	Arginine ABC transporter, ATP-binding protein
artI	* Psychromonas ingrahamii 37 Site: position = -130 score = 4.87272 sequence = AATGCATAACTATTCAAT Site: position = -218 score = 4.37753 sequence = ATTGCTTCATTATTTATT Gene: Ping_0296: Arginine ABC transporter, substrate-binding protein	* Psychromonas sp. CNPT3 Site: position = -286 score = 4.16016 sequence = ATTTATTTTTTATGCAAA Site: position = -306 score = 4.4514 sequence = GGTGCATAAGTATGCACT Gene: PCNPT3_03566: Arginine ABC transporter, substrate-binding protein	Moritella sp. PE36 Gene: PE36_07647: Arginine ABC transporter, substrate-binding protein	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0656: Arginine ABC transporter, substrate-binding protein	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0656: Arginine ABC transporter, substrate-binding protein	Tolumonas auensis DSM 9187	Arginine ABC transporter, substrate-binding protein
artQ	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_07642: Arginine ABC transporter, permease protein 1	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0657: Arginine ABC transporter, permease protein 1	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0657: Arginine ABC transporter, permease protein 1	Tolumonas auensis DSM 9187	Arginine ABC transporter, permease protein 1
artM	Psychromonas ingrahamii 37	Psychromonas sp. CNPT3	Moritella sp. PE36 Gene: PE36_07637: Arginine ABC transporter, permease protein 2	Aeromonas hydrophila subsp. hydrophila ATCC 7966 Gene: AHA_0658: Arginine ABC transporter, permease protein 2	Aeromonas salmonicida subsp. salmonicida A449 Gene: ASA_0658: Arginine ABC transporter, permease protein 2	Tolumonas auensis DSM 9187	Arginine ABC transporter, permease protein 2

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ArgR - Psychromonadaceae/Aeromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --