Regulog Lysine - Enterobacteriales
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By RNA motif - Lysine
- By effector - Lysine
- By pathway - Lysine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Escherichia coli str. K-12 substr. MG1655 | 1 | 1 |
| Salmonella typhimurium LT2 | ||
| Citrobacter koseri ATCC BAA-895 | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 1 | 1 |
| Enterobacter sp. 638 | ||
| Erwinia amylovora ATCC 49946 | 1 | 1 |
| Yersinia pestis KIM | ||
| Serratia proteamaculans 568 | 1 | 1 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 1 | 1 |
| Edwardsiella tarda EIB202 | ||
| Proteus mirabilis HI4320 | ||
| Photorhabdus luminescens subsp. laumondii TTO1 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| lysC |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -289 score = 82.53 sequence = GCAGGCCAGAAGAGG... Gene: b4024: Aspartokinase (EC 2.7.2.4) |
Gene: STM4220: Aspartokinase (EC 2.7.2.4) |
Gene: CKO_03894: Aspartokinase (EC 2.7.2.4) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -416 score = 74.92 sequence = AATTGCCAGAAGAGG... Gene: KPN_04412: Aspartokinase (EC 2.7.2.4) |
Gene: Ent638_0229: Aspartokinase (EC 2.7.2.4) |
*
Erwinia amylovora ATCC 49946 Site: position = -285 score = 59.73 sequence = GCTTGCCAGAAGAGG... Gene: EAM_0253: Aspartokinase (EC 2.7.2.4) |
Gene: y0023: Aspartokinase (EC 2.7.2.4) |
*
Serratia proteamaculans 568 Site: position = -302 score = 83.45 sequence = AAGCCAGAAGAGGTG... Gene: Spro_4479: Aspartokinase (EC 2.7.2.4) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -306 score = 103.16 sequence = AAGCCAGAAGAGGCG... Gene: ECA3981: Aspartokinase (EC 2.7.2.4) |
Gene: ETAE_0201: Aspartokinase (EC 2.7.2.4) |
Gene: PMI2755: Aspartokinase (EC 2.7.2.4) |
Gene: plu4380: Aspartokinase (EC 2.7.2.4) |
Aspartokinase (EC 2.7.2.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |