Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Lysine - Enterobacteriales

Properties
Regulator type: RNA regulatory element
Name: Lysine
RFAM: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Escherichia coli str. K-12 substr. MG1655 1 1
Salmonella typhimurium LT2
Citrobacter koseri ATCC BAA-895
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 1 1
Enterobacter sp. 638
Erwinia amylovora ATCC 49946 1 1
Yersinia pestis KIM
Serratia proteamaculans 568 1 1
Erwinia carotovora subsp. atroseptica SCRI1043 1 1
Edwardsiella tarda EIB202
Proteus mirabilis HI4320
Photorhabdus luminescens subsp. laumondii TTO1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
lysC
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -289
score = 82.53
sequence = GCAGGCCAGAAGAGG...

Gene: b4024: Aspartokinase (EC 2.7.2.4)
 
Salmonella typhimurium LT2

Gene: STM4220: Aspartokinase (EC 2.7.2.4)
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_03894: Aspartokinase (EC 2.7.2.4)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -416
score = 74.92
sequence = AATTGCCAGAAGAGG...

Gene: KPN_04412: Aspartokinase (EC 2.7.2.4)
 
Enterobacter sp. 638

Gene: Ent638_0229: Aspartokinase (EC 2.7.2.4)
*
Erwinia amylovora ATCC 49946

Site:
position = -285
score = 59.73
sequence = GCTTGCCAGAAGAGG...

Gene: EAM_0253: Aspartokinase (EC 2.7.2.4)
 
Yersinia pestis KIM

Gene: y0023: Aspartokinase (EC 2.7.2.4)
*
Serratia proteamaculans 568

Site:
position = -302
score = 83.45
sequence = AAGCCAGAAGAGGTG...

Gene: Spro_4479: Aspartokinase (EC 2.7.2.4)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -306
score = 103.16
sequence = AAGCCAGAAGAGGCG...

Gene: ECA3981: Aspartokinase (EC 2.7.2.4)
 
Edwardsiella tarda EIB202

Gene: ETAE_0201: Aspartokinase (EC 2.7.2.4)
 
Proteus mirabilis HI4320

Gene: PMI2755: Aspartokinase (EC 2.7.2.4)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu4380: Aspartokinase (EC 2.7.2.4)
Aspartokinase (EC 2.7.2.4)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise