Regulog GbsR (YuaC) - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | MarR |
| Regulation mode: | repressor |
| Biological process: | Glycine betaine synthesis |
| Effector: | Choline |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - MarR
- By effector - Choline
- By pathway - Glycine betaine synthesis
| Genome | Genes | Operons |
|---|---|---|
| Anoxybacillus flavithermus WK1 | ||
| Bacillus amyloliquefaciens FZB42 | 2 | 1 |
| Bacillus cereus ATCC 14579 | ||
| Bacillus clausii KSM-K16 | 2 | 1 |
| Bacillus halodurans C-125 | ||
| Bacillus licheniformis DSM 13 | 2 | 1 |
| Bacillus pumilus SAFR-032 | 2 | 1 |
| Bacillus subtilis subsp. subtilis str. 168 | 2 | 1 |
| Geobacillus kaustophilus HTA426 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| gbsA |
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Bacillus amyloliquefaciens FZB42 Site: position = -47 score = 6.20369 sequence = ATTAAATTTTTATTTAAC Gene: RBAM_028160: Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
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*
Bacillus clausii KSM-K16 Site: position = -38 score = 5.31906 sequence = GTTTAATATATATTAAAC Gene: ABC0980: Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
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*
Bacillus licheniformis DSM 13 Site: position = -47 score = 6.20369 sequence = ATTAAATTTTTATTTAAC Gene: BLi03270: Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
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Bacillus pumilus SAFR-032 Site: position = -53 score = 6.37625 sequence = GTTAAATTTTTATTTAAC Gene: BPUM_2735: Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -46 score = 6.20369 sequence = ATTAAATTTTTATTTAAC Gene: BSU31060: Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
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Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
| gbsB |
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Gene: RBAM_028150: Choline dehydrogenase |
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Gene: ABC0979: Choline dehydrogenase |
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Gene: BLi03269: Choline dehydrogenase |
Gene: BPUM_2734: Choline dehydrogenase |
Gene: BSU31050: Choline dehydrogenase |
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Choline dehydrogenase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |