Statistics of regulated genes

Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	4	3
Bacillus amyloliquefaciens FZB42	4	3
Bacillus pumilus SAFR-032	4	3
Bacillus licheniformis DSM 13	4	3
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831	3	2
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes												Function
CRON 1.
htrB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -200 score = 6.39995 sequence = TTTTCATT-(1)-TTATCCCA Site: position = -221 score = 8.48492 sequence = TTTTCATA-(0)-ATTTCACA Gene: BSU33000: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -200 score = 6.39995 sequence = TTTTCATT-(1)-TTATCCCA Site: position = -221 score = 8.48492 sequence = TTTTCATA-(0)-ATTTCACA Gene: RBAM_030110: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Bacillus pumilus SAFR-032 Site: position = -122 score = 6.2324 sequence = ATTATATA-(0)-ATTTGACA Gene: BPUM_2952: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Bacillus licheniformis DSM 13 Site: position = -161 score = 6.39995 sequence = TTTTCATT-(1)-TTATCCCA Site: position = -182 score = 8.48492 sequence = TTTTCATA-(0)-ATTTCACA Gene: BLi03481: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC5458: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Bacillus halodurans C-125 Gene: BH4022: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Bacillus clausii KSM-K16 Gene: ABC4094: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Oceanobacillus iheyensis HTE831 Site: position = -88 score = 6.77016 sequence = ATTACACA-(1)-TTTTTCCA Gene: OB0583: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Paenibacillus sp. JDR-2	Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
CRON 2.
htrA	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -99 score = 6.39995 sequence = TTTTCATT-(1)-TTATCCCA Site: position = -120 score = 8.48492 sequence = TTTTCACA-(0)-ATTTCCCA Gene: BSU12900: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Bacillus amyloliquefaciens FZB42 Site: position = -90 score = 6.39995 sequence = TTTTCATT-(1)-TTATCCCA Site: position = -111 score = 8.48492 sequence = TTTTCACA-(0)-ATTTCCCA Gene: RBAM_012750: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Bacillus pumilus SAFR-032 Site: position = -100 score = 6.39995 sequence = TTTTCATT-(1)-TTATCCCA Site: position = -121 score = 7.63701 sequence = TTTTAACA-(0)-ATTTCCCA Gene: BPUM_1181: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	* Bacillus licheniformis DSM 13 Site: position = -73 score = 6.39995 sequence = TTTTCATG-(1)-TTATCCCA Site: position = -94 score = 7.52716 sequence = CTTTGACA-(0)-ATTTCCCA Gene: BLi01390: Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Serine protease, DegP/HtrA, do-like (EC 3.4.21.-)
CRON 3.
cssR	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -72 score = 1.11975 sequence = TGTGAAAT-(0)-TATGAAAA Site: position = -94 score = 0.352088 sequence = TGGGATAA-(1)-AATGAAAA Gene: BSU33010: Two-component response regulator of protein secretion stress, OmpR family	* Bacillus amyloliquefaciens FZB42 Site: position = -71 score = 1.11975 sequence = TGTGAAAT-(0)-TATGAAAA Site: position = -93 score = 0.352088 sequence = TGGGATAA-(1)-AATGAAAA Gene: RBAM_030120: Two-component response regulator of protein secretion stress, OmpR family	* Bacillus pumilus SAFR-032 Site: position = -84 score = 1.11975 sequence = TGTGAAAT-(0)-TGTGAAAA Site: position = -230 score = 0.252899 sequence = TGTCAAAT-(0)-TATATAAT Gene: BPUM_2953: Two-component response regulator of protein secretion stress, OmpR family	* Bacillus licheniformis DSM 13 Site: position = -72 score = 1.11975 sequence = TGTGAAAT-(0)-TATGAAAA Site: position = -94 score = 0.352088 sequence = TGGGATAA-(1)-AATGAAAA Gene: BLi03482: Two-component response regulator of protein secretion stress, OmpR family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	* Oceanobacillus iheyensis HTE831 Site: position = -91 score = 0.252899 sequence = TGGAAAAA-(1)-TGTGTAAT Gene: OB0584: Two-component response regulator of protein secretion stress, OmpR family	Paenibacillus sp. JDR-2	Two-component response regulator of protein secretion stress, OmpR family
cssS	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU33020: Two-component sensor histidine kinase	Bacillus amyloliquefaciens FZB42 Gene: RBAM_030130: Two-component sensor histidine kinase	Bacillus pumilus SAFR-032 Gene: BPUM_2954: Two-component sensor histidine kinase	Bacillus licheniformis DSM 13 Gene: BLi03483: Two-component sensor histidine kinase	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB0585: Two-component sensor histidine kinase	Paenibacillus sp. JDR-2	Two-component sensor histidine kinase

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