Regulog IolR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Inositol utilization |
| Effector: | 2-deoxy-5-keto-D-gluconate 6-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - DeoR
- By effector - 2-deoxy-5-keto-D-gluconate 6-phosphate
- By pathway - Inositol utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 12 | 2 |
| Bacillus amyloliquefaciens FZB42 | 12 | 2 |
| Bacillus pumilus SAFR-032 | ||
| Bacillus licheniformis DSM 13 | 12 | 2 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | 10 | 2 |
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| iolR |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -69 score = -1.47248 sequence = ACTATTGATTAACTTTTGGTTT Gene: BSU39770: Transcriptional regulator of myo-inositol utilization, DeoR family |
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Bacillus amyloliquefaciens FZB42 Site: position = -69 score = -0.587287 sequence = ACTATTGATTAACTTCTGGTGT Gene: RBAM_036790: Transcriptional regulator of myo-inositol utilization, DeoR family |
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Bacillus licheniformis DSM 13 Site: position = -66 score = -1.71918 sequence = ATTATTGGTTAACTTTTGGGTT Gene: BLi04252: Transcriptional regulator of myo-inositol utilization, DeoR family |
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Bacillus clausii KSM-K16 Site: position = -160 score = -2.01547 sequence = CTTTTTGATCATTTGTTGGTTA Gene: ABC0421: Transcriptional regulator of myo-inositol utilization, DeoR family |
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Transcriptional regulator of myo-inositol utilization, DeoR family |
| iolS |
Gene: BSU39780: Oxidoreductase |
Gene: RBAM_036800: Oxidoreductase |
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Gene: BLi04253: Oxidoreductase |
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Gene: ABC1667: Oxidoreductase |
Gene: OB0446: Oxidoreductase |
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Oxidoreductase |
| CRON 2. | ||||||||||||
| iolA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -196 score = 6.44205 sequence = TAACCAAGAAATGACCAAAAAG Gene: BSU39760: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Bacillus amyloliquefaciens FZB42 Site: position = -224 score = 6.54509 sequence = TAACCAAGAAATGACCAAAACA Site: position = -213 score = 4.5549 sequence = TGACCAAAACATAACCTGTAAA Gene: RBAM_036780: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Bacillus licheniformis DSM 13 Site: position = -242 score = 6.44205 sequence = TAACCAAGAAGTGACCAAAACA Gene: BLi04251: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Gene: GK1887: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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*
Bacillus clausii KSM-K16 Site: position = -66 score = 5.91122 sequence = TAACCAACAAATGATCAAAAAG Gene: ABC0422: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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Gene: Pjdr2_1951: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
| iolB |
Gene: BSU39750: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
Gene: RBAM_036770: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: BLi04250: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: GK1889: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: BH2320: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
Gene: ABC0423: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
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Gene: Pjdr2_1953: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
5-deoxy-glucuronate isomerase (EC 5.3.1.-) |
| iolC |
Gene: BSU39740: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
Gene: RBAM_036760: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: BLi04249: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: GK1888: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: BH2319: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
Gene: ABC0424: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
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Gene: Pjdr2_1950: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
5-keto-2-deoxygluconokinase (EC 2.7.1.92) |
| iolD |
Gene: BSU39730: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
Gene: RBAM_036750: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: BLi04248: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: GK1891: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: BH2318: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
Gene: ABC0425: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
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Gene: Pjdr2_1948: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase |
| iolE |
Gene: BSU39720: Inosose dehydratase (EC 4.2.1.44) |
Gene: RBAM_036740: Inosose dehydratase (EC 4.2.1.44) |
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Gene: BLi04247: Inosose dehydratase (EC 4.2.1.44) |
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Gene: GK1890: Inosose dehydratase (EC 4.2.1.44) |
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Gene: BH2317: Inosose dehydratase (EC 4.2.1.44) |
Gene: ABC0426: Inosose dehydratase (EC 4.2.1.44) |
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Gene: Pjdr2_1949: Inosose dehydratase (EC 4.2.1.44) |
Inosose dehydratase (EC 4.2.1.44) |
| iolF |
Gene: BSU39710: Minor myo-inositol transporter IolF |
Gene: RBAM_036730: Minor myo-inositol transporter IolF |
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Gene: BLi04246: Minor myo-inositol transporter IolF |
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Minor myo-inositol transporter IolF |
| iolG |
Gene: BSU39700: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
Gene: RBAM_036720: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
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Gene: BLi04245: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
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Gene: BH2316: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
Gene: ABC0427: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
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Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) |
| iolH |
Gene: BSU39690: putative sugar-phosphate epimerase/isomerase IolH |
Gene: RBAM_036710: putative sugar-phosphate epimerase/isomerase IolH |
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Gene: BLi04244: putative sugar-phosphate epimerase/isomerase IolH |
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putative sugar-phosphate epimerase/isomerase IolH |
| iolI |
Gene: BSU39680: Inosose isomerase (EC 5.3.99.-) |
Gene: RBAM_036700: Inosose isomerase (EC 5.3.99.-) |
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Gene: BLi04243: Inosose isomerase (EC 5.3.99.-) |
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Gene: GK1892: Inosose isomerase (EC 5.3.99.-) |
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Gene: BH2315: Inosose isomerase (EC 5.3.99.-) |
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Inosose isomerase (EC 5.3.99.-) |
| iolJ |
Gene: BSU39670: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
Gene: RBAM_036690: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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Gene: BLi04242: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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Gene: GK1886: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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Gene: BH2314: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
Gene: ABC0428: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
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5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) |
| iolX |
Gene: BSU10850: Scyllo-inositol dehydrogenase (EC 1.1.1.-) |
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Gene: ABC0429: Scyllo-inositol dehydrogenase (EC 1.1.1.-) |
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Scyllo-inositol dehydrogenase (EC 1.1.1.-) |
| BH2222 |
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Gene: BH2222: Na+:myo-inositol cotransporter |
Gene: ABC0430: Na+:myo-inositol cotransporter |
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Na+:myo-inositol cotransporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |