Regulog DeoR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | SorC |
| Regulation mode: | repressor |
| Biological process: | Deoxynucleoside utilization |
| Effector: | Deoxyribose-5-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - SorC
- By effector - Deoxyribose-5-phosphate
- By pathway - Deoxynucleoside utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 3 | 1 |
| Bacillus amyloliquefaciens FZB42 | 3 | 1 |
| Bacillus pumilus SAFR-032 | 3 | 1 |
| Bacillus licheniformis DSM 13 | 3 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | 4 | 1 |
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| dra |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -65 score = 4.10052 sequence = ATttACAtAtgTTCAA Site: position = -88 score = 6.45608 sequence = TTGAACAAAATTTCAA Gene: BSU39420: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
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Bacillus amyloliquefaciens FZB42 Site: position = -84 score = 6.45608 sequence = ATGAACATAATTTCAA Site: position = -61 score = 4.10052 sequence = ATttACAtAtgTTCAA Gene: RBAM_036480: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
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Bacillus pumilus SAFR-032 Site: position = -83 score = 6.45608 sequence = ATGAACAAAATTTCAT Site: position = -35 score = 4.10052 sequence = ATGAtgAAAgTaTCAt Gene: BPUM_3587: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
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Bacillus licheniformis DSM 13 Site: position = -84 score = 6.38022 sequence = TTGAACAAAATTTCAT Gene: BLi04229: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
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Bacillus cereus ATCC 14579 Site: position = -84 score = 6.53194 sequence = ATGAACAAAATTTCAA Site: position = -229 score = 4.30049 sequence = tTGAACAcAATTTgcc Gene: BC1820: Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
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Deoxyribose-phosphate aldolase (EC 4.1.2.4) |
| nupC |
Gene: BSU39410: Pyrimidine-nucleoside Na+(H+) cotransporter |
Gene: RBAM_036470: Pyrimidine-nucleoside Na+(H+) cotransporter |
Gene: BPUM_3586: Pyrimidine-nucleoside Na+(H+) cotransporter |
Gene: BLi04228: Pyrimidine-nucleoside Na+(H+) cotransporter |
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Gene: BC1821: Pyrimidine-nucleoside Na+(H+) cotransporter |
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Pyrimidine-nucleoside Na+(H+) cotransporter |
| pdp |
Gene: BSU39400: Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
Gene: RBAM_036460: Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
Gene: BPUM_3585: Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
Gene: BLi04227: Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
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Gene: BC1822: Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
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Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) |
| cdd |
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Gene: BC1823: cytidine deaminase |
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Cytidine deaminase (EC 3.5.4.5) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |