Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Bacillus cereus AH1134

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus cereus AH1134
Orthologous TF(s) BcerAH1_010100002190
Regulated genes 16
Built upon 559 sites [see more]
Predicted regulatory interactions in Bacillus cereus AH1134
Locus tag Position Score Sequence
Position: -36
Score: 5.1
Sequence: TTGAAAGCGCAATCAT
Locus tag: BcerAH1_010100004063
BcerAH1_010100004063 -36 5.1 TTGAAAGCGCAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citH
Ortholog function: Ca2+/citrate complex secondary transporter
Bacillus cereus ATCC 14579 BC0562 -36 5.1 TTGAAAGCGCAATCAT
Position: -57
Score: 4.3
Sequence: ATGTGAACGTTTTCTT
Locus tag: BcerAH1_010100005481
BcerAH1_010100005481 -57 4.3 ATGTGAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqgQ
Ortholog function: Hypothetical Cytosolic Protein
Anoxybacillus flavithermus WK1 Aflv_0894 -23 4.5 TTGAAAACGCTTATAC
Bacillus cereus ATCC 14579 BC4261 -57 4.3 ATGTGAACGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2216 -49 4.2 CTGAAAGCGCATTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU24860 -79 4.7 TTGTCAGCGTTTTCTT
Position: -222
Score: 4.5
Sequence: AAGAAAGCGTAAACAT
Locus tag: BcerAH1_010100006431
BcerAH1_010100006431 -222 4.5 AAGAAAGCGTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drm
Ortholog function: Phosphopentomutase (EC 5.4.2.7)
Anoxybacillus flavithermus WK1 Aflv_0998 -114 4.9 ATGAAAACGTTTTATA
Bacillus amyloliquefaciens FZB42 RBAM_021610 -74 4.5 ATGTAAACGGTTTATA
Bacillus cereus ATCC 14579 BC4087 -222 4.5 AAGAAAGCGTAAACAT
Bacillus licheniformis DSM 13 BLi02500 -99 4.1 GTGTAAACGGTTTATA
Bacillus pumilus SAFR-032 BPUM_2081 -82 4.5 TTGTAAACGGTTTATA
Bacillus subtilis subsp. subtilis str. 168 BSU23500 -77 4.7 ATGAAAACGGTTTATA
Position: -42
Score: 4.7
Sequence: TTGAAAAGGTTTACAA
Locus tag: BcerAH1_010100008637
BcerAH1_010100008637 -42 4.7 TTGAAAAGGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BC0805
Ortholog function: Outer surface protein of unknown function, cellobiose operon
Bacillus cereus ATCC 14579 BC0805 -105 4.6 AAGAAAGCGGATTCAA
-42 4.7 TTGAAAAGGTTTACAA
Position: -206
Score: 4.7
Sequence: TTGACACCGCTTTCAT
Position: -34
Score: 4.8
Sequence: TTGGAAGCGTTTAAAT
Locus tag: BcerAH1_010100009678
BcerAH1_010100009678 -206 4.7 TTGACACCGCTTTCAT
-34 4.8 TTGGAAGCGTTTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: Glycerol uptake facilitator protein
Bacillus cereus ATCC 14579 BC1034 -191 4.7 TTGACACCGCTTTCAT
Bacillus clausii KSM-K16 ABC3383 -198 4.2 ATGTATCCGTTTACAA
Bacillus licheniformis DSM 13 BLi00994 -207 4.5 TTGACAACGCTTTCAC
Bacillus pumilus SAFR-032 BPUM_0882 -191 4.9 TTGACAACGTTTTCAT
Bacillus subtilis subsp. subtilis str. 168 BSU09280 -182 4.7 TTGACACCGCTTTCAT
Geobacillus kaustophilus HTA426 GK1359 -206 5.1 TTGACAGCGTTTTCAA
Oceanobacillus iheyensis HTE831 OB2476 -164 4.7 TTGACAACGCTTTCAG
Position: -178
Score: 4.3
Sequence: ATGTATACGTTTTCTT
Locus tag: BcerAH1_010100010698
BcerAH1_010100010698 -178 4.3 ATGTATACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b558 subunit
Bacillus amyloliquefaciens FZB42 RBAM_025520 -143 4.3 ATGTACACGTTTTCTT
Bacillus cereus ATCC 14579 BC4518 -178 4.3 ATGTATACGTTTTCTT
Bacillus clausii KSM-K16 ABC2664 -190 4.3 TTGAATCCGTTTTCTT
Bacillus licheniformis DSM 13 BLi02994 -143 4.4 ATGTACGCGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2503 -139 4.2 ATGTACGCGGTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU28450 -139 4.4 ATGTACGCGTTTTCTT
Position: -54
Score: 4.5
Sequence: ATGCAAACGTTTTCAG
Locus tag: BcerAH1_010100011057
BcerAH1_010100011057 -54 4.5 ATGCAAACGTTTTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16 ABC3520 -37 4.6 AAGAAAGCGGTTACTT
Bacillus halodurans C-125 BH2019 -55 4.4 TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032 BPUM_3613 -51 4.8 AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU34160 -39 5 TTTAAAGCGCTTTCAT
Position: -73
Score: 5.1
Sequence: ATGAAAACGCTGTCAT
Locus tag: BcerAH1_010100011217
BcerAH1_010100011217 -73 5.1 ATGAAAACGCTGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK1048
Ortholog function: CBS domain containing protein
Bacillus cereus ATCC 14579 BC3983 -73 5.1 ATGAAAACGCTGTCAT
Position: -122
Score: 4.7
Sequence: AAGTAAGCGTTTTCTT
Locus tag: BcerAH1_010100011972
BcerAH1_010100011972 -122 4.7 AAGTAAGCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lutA
Ortholog function: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Anoxybacillus flavithermus WK1 Aflv_2009 -30 4.7 AAGAAAACGTTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_031470 -181 4.7 ATGTAAGCGATTACTT
Bacillus cereus ATCC 14579 BC1303 -122 4.7 AAGTAAGCGTTTTCTT
Bacillus clausii KSM-K16 ABC0975 -69 4.8 TTGTAAGTGCTTACAT
Bacillus halodurans C-125 BH1832 -70 4.8 TTTAAAACGCTTACAT
Geobacillus kaustophilus HTA426 GK0395 -343 4.8 ATAAAAGCGTTTTCAG
Oceanobacillus iheyensis HTE831 OB0370 -36 4.1 ATGAAATCGCTTCATT
Position: -136
Score: 5.1
Sequence: TTGTAAACGTTTTCTT
Locus tag: BcerAH1_010100011997
BcerAH1_010100011997 -136 5.1 TTGTAAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Anoxybacillus flavithermus WK1 Aflv_1436 -131 4.5 TCGTAAACGTTTACAA
Bacillus cereus ATCC 14579 BC1308 -136 5.1 TTGTAAACGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -142 4.5 ATGATAGCGTTTTCGT
Position: -85
Score: 4.5
Sequence: ATGTAAACGCATTTAT
Locus tag: BcerAH1_010100012274
BcerAH1_010100012274 -85 4.5 ATGTAAACGCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1 Aflv_0142 -34 4 GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42 RBAM_001800 -32 4.1 TTGTAAACGAATACAC
Bacillus cereus ATCC 14579 BC0168 -84 4.5 ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13 BLi00172 -31 4.5 TTGTAAACGAATACAA
Bacillus pumilus SAFR-032 BPUM_0145 -35 4.6 TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU01540 -32 4.1 TTGTAAACGAATACAC
Position: -187
Score: 4.9
Sequence: ATGAAAGCGTGTTCAT
Locus tag: BcerAH1_010100012959
BcerAH1_010100012959 -187 4.9 ATGAAAGCGTGTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citS
Ortholog function: Two-component sensor kinase
Bacillus amyloliquefaciens FZB42 RBAM_007780 1297 4.5 TTGATAACGCTTTCGA
Bacillus cereus ATCC 14579 BC0936 -187 4.9 ATGAAAGCGTGTTCAT
Bacillus clausii KSM-K16 ABC1011 -42 4.2 TTGAAACCGTTATACT
Bacillus halodurans C-125 BH3839 -41 4.8 ATGAAAGCGTTTATTA
Bacillus licheniformis DSM 13 BLi00225 1303 4.5 TTGATAACGCTTTCGA
Bacillus subtilis subsp. subtilis str. 168 BSU07580 1297 4.5 TTGATAACGCTTTCGA
Position: -68
Score: 5
Sequence: ATGTAAACGCTTACTT
Locus tag: BcerAH1_010100017398
BcerAH1_010100017398 -68 5 ATGTAAACGCTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lrgA
Ortholog function: Antiholin-like protein LrgA
Bacillus cereus ATCC 14579 BC5439 -59 5 ATGTAAACGCTTACTT
Bacillus licheniformis DSM 13 BLi03037 -68 4.8 TTGAAAACGCTTTTTT
Bacillus pumilus SAFR-032 BPUM_2534 -68 4.5 TTGTAAACGCTTCATT
Bacillus subtilis subsp. subtilis str. 168 BSU28910 -68 4.9 TTGTAAGCGCTTTATA
Position: -46
Score: 4.3
Sequence: TTGTGACCGTTTTCAT
Locus tag: BcerAH1_010100028302
BcerAH1_010100028302 -46 4.3 TTGTGACCGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Transcriptional regulator of fructose utilization, DeoR family
Anoxybacillus flavithermus WK1 Aflv_1478 -24 4.6 ATGTAAGCGATTTAAA
Bacillus amyloliquefaciens FZB42 RBAM_014120 -28 4.5 ATGAATACGTTTCCAA
Bacillus cereus ATCC 14579 BC3720 -46 4.3 TTGTGACCGTTTTCAT
Bacillus licheniformis DSM 13 BLi01652 -29 4.6 ATGAAGGCGTTTCCAA
Bacillus pumilus SAFR-032 BPUM_1334 -30 4.7 ATGAATACGTTTTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU14380 -29 4.7 ATGAATACGTTTTCAT
Oceanobacillus iheyensis HTE831 OB0840 -113 5 TTGAAAGCGTTTTATT
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