Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GamR regulog to Bacillus licheniformis DSM 13

Reference regulog properties
Source regulog: GamR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucosamine utilization
Effector: Glucosamine-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus licheniformis DSM 13
Orthologous TF(s) BLi00336
Regulated genes 3
Built upon 25 sites [see more]
Predicted regulatory interactions in Bacillus licheniformis DSM 13
Locus tag Position Score Sequence
Position: -99
Score: 6.2
Sequence: CAATTTGTTATAACAAATAT
Locus tag: BLi00335
BLi00335 -99 6.2 CAATTTGTTATAACAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: licH
Ortholog function: Cytoplasmic 6-phospho-beta-glucosidase (EC 3.2.1.86)
Bacillus clausii KSM-K16 ABC0643 -97 5.2 AAATAGGTAGTTACAAATTT
-73 5.7 TGATTAGTAATTACAAATAT
Bacillus halodurans C-125 BH0912 -74 5.6 TGATTAGTAGTAACAAATAT
Bacillus licheniformis DSM 13 BLi00335 -99 6.2 CAATTTGTTATAACAAATAT
-85 4.6 AAATATGTATGGACAAATTT
-71 5.2 AAATTTGTTATAACATGTTA
Oceanobacillus iheyensis HTE831 OB2273 -126 5.8 AATTGTGTTATAACAAATTT
Position: -82
Score: 6.2
Sequence: ATATTTGTTATAACAAATTG
Locus tag: BLi00336
BLi00336 -82 6.2 ATATTTGTTATAACAAATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gamR
Ortholog function: Predicted transcriptional regulator of glucosamine utilization, GntR family
Bacillus licheniformis DSM 13 BLi00336 -110 5.2 TAACATGTTATAACAAATTT
-96 4.6 AAATTTGTCCATACATATTT
-82 6.2 ATATTTGTTATAACAAATTG
Bacillus subtilis subsp. subtilis str. 168 BSU02370 -186 5.9 ATATTTGTTATGACCAATTT
-163 5 ATACTTGTCATTACGAATTT
Oceanobacillus iheyensis HTE831 OB2272 -81 5.8 AAATTTGTTATAACACAATT
Position: -300
Score: 6.2
Sequence: AAATTTGTCATAACAAATTT
Locus tag: BLi00338
BLi00338 -300 6.2 AAATTTGTCATAACAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: chiA
Ortholog function: Chitinase (EC 3.2.1.14)
Bacillus clausii KSM-K16 ABC0646 -60 4.8 GAATTAGTAGTAACAACTTT
Bacillus halodurans C-125 BH0916 -92 5.6 ATATTTGTTATTACATTTAT
-68 4.7 ATTTTAGTAGTAACTTTTAT
-44 5.2 AATATTGTTACTACAAATAA
Bacillus licheniformis DSM 13 BLi00338 -300 6.2 AAATTTGTCATAACAAATTT