Propagation of Fur regulog to Bacillus licheniformis DSM 13
| Source regulog: | Fur - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi02503 |
| Regulated genes | 20 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -45
Score: 6.4 Sequence: ATTGATAATGATAATCATT
Locus tag: BLi00463
|
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| BLi00463 | -45 | 6.4 | ATTGATAATGATAATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yclN | ||||
| Ortholog function: Iron compound ABC uptake transporter permease protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03800 | -98 | 6.4 | AATGATAATGATAATCAAT |
| -92 | 4.9 | AATGATAATCAATTACTAT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_004050 | -87 | 5.9 | GTTGATAATGATAATCATT |
| Bacillus pumilus SAFR-032 | BPUM_0984 | -57 | 6.4 | ATTGATAATGATAATCATT |
| Bacillus licheniformis DSM 13 | BLi00463 | -46 | 6.4 | ATTGATAATGATaATCAtT |
| Bacillus cereus ATCC 14579 | BC5105 | -107 | 6.5 | AATGAAAATGATTATCAAT |
| Bacillus halodurans C-125 | BH1025 | -71 | 6.1 | AATGATAATGCTTATCATT |
| -49 | 6.2 | ACTGATAATGATTATCACT | ||
| Bacillus clausii KSM-K16 | ABC2895 | -129 | 4.5 | AGCGAGATTCTTTCTCATT |
| -68 | 6.2 | ATTGATAATGAGTATCATT | ||
| Oceanobacillus iheyensis HTE831 | OB0539 | -61 | 5.2 | CTTAATAATGATAATCATT |
| -55 | 6.5 | AATGATAATCATTTTCAAT | ||
|
Position: -207
Score: 6.7 Sequence: ATTGATAATGATTATCAAT
Locus tag: BLi00541
|
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| BLi00541 | -207 | 6.7 | ATTGATAATGATTATCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydbN | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU04530 | -164 | 6.7 | ATTGATAATGATTATCAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_004860 | -208 | 6.1 | ACTGATAATGATTCTCAAT |
| Bacillus pumilus SAFR-032 | BPUM_0425 | -74 | 6.5 | ATTGAAAATGATTATCAAT |
| Bacillus licheniformis DSM 13 | BLi00541 | -207 | 6.7 | ATTGATAATGATTATCAAT |
|
Position: -33
Score: 6.5 Sequence: AATGATAATCATTTTCATT
Locus tag: BLi00873
|
||||
| BLi00873 | -33 | 6.5 | AATGATAATCATTTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfhC | ||||
| Ortholog function: Putative nitroreductase family protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08480 | -40 | 6.5 | AATGATAATCATTTTCAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_008550 | -40 | 6.5 | AATGATAATCATTTTCATT |
| Bacillus pumilus SAFR-032 | BPUM_0791 | -45 | 5.9 | AATGAGAATCAATTTCAAT |
| Bacillus licheniformis DSM 13 | BLi00873 | -33 | 6.5 | AATGATAATCATTTTCATT |
| Bacillus cereus ATCC 14579 | BC0786 | -67 | 6.2 | ATTGAAAATCAATATCAAT |
| Bacillus halodurans C-125 | BH0303 | -91 | 6.1 | TTTGAAAATGATTATCATT |
| Bacillus clausii KSM-K16 | ABC0928 | -80 | 5.6 | AATGAAAATGAGAATCATT |
| Oceanobacillus iheyensis HTE831 | OB0528 | -41 | 6.5 | ATTGATAATAATTATCAAT |
|
Position: -77
Score: 6.7 Sequence: AATGATAATGATTATCATT
Position: -71
Score: 5.9 Sequence: AATGATTATCATTGTCATT
Locus tag: BLi01111
|
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| BLi01111 | -77 | 6.7 | AATGATAATGATTATCATT | |
| -71 | 5.9 | AATGATTATCATTGTCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhfQ | ||||
| Ortholog function: Putative iron(III) dicitrate-binding lipoprotein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10330 | -82 | 5.7 | GGTGATAATGATTCTCATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_010510 | -72 | 6.4 | AATGATAATGAATATCATT |
| Bacillus licheniformis DSM 13 | BLi01111 | -77 | 6.7 | AATGATAATGATTATCATT |
|
Position: -35
Score: 6.2 Sequence: AATGATAATCTTTATCAAT
Locus tag: BLi01183
|
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| BLi01183 | -35 | 6.2 | AATGATAATCTTTATCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dat | ||||
| Ortholog function: Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) | ||||
| Bacillus pumilus SAFR-032 | BPUM_1019 | -36 | 6.2 | AATGATAATCTTTATCAAT |
| Bacillus licheniformis DSM 13 | BLi01183 | -35 | 6.2 | AATGATAATCTTTATCAAT |
| Bacillus halodurans C-125 | BH2624 | -100 | 5.9 | GATGATTATCATTATCAAT |
| -59 | 6.5 | AATGATAATCATTATCACT | ||
|
Position: -73
Score: 6.7 Sequence: ATTGATAATCATTATCATT
Locus tag: BLi01629
|
||||
| BLi01629 | -73 | 6.7 | ATTGATAATCATTATCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ykuN | ||||
| Ortholog function: Flavodoxin | ||||
| Bacillus licheniformis DSM 13 | BLi01629 | -73 | 6.7 | ATTGATAATCATTATCATT |
| -35 | 6.5 | AATGAAAATCATTATCAAT | ||
|
Position: -108
Score: 6.2 Sequence: ATTGATAATCATTTTCAGT
Locus tag: BLi01925
|
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| BLi01925 | -108 | 6.2 | ATTGATAATCATTTTCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: miaB | ||||
| Ortholog function: (dimethylallyl)adenosine tRNA methylthiotransferase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17010 | -110 | 5.8 | ATTGATTATTATTCTCAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_016850 | -111 | 5.3 | ATTGATTCTTATTCTCAAT |
| Bacillus licheniformis DSM 13 | BLi01925 | -108 | 6.2 | ATTGATAATCATTTTCAGT |
|
Position: -40
Score: 6 Sequence: AATGATAATGGTTCTCAAT
Locus tag: BLi02271
|
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| BLi02271 | -40 | 6 | AATGATAATGGTTCTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exlX | ||||
| Ortholog function: Extracellular endoglucanase precursor (expansin) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU18630 | -46 | 6.4 | AATGATAATGATTCTCATT |
| Bacillus licheniformis DSM 13 | BLi02271 | -40 | 6 | AATGATAATGGTTCTCAAT |
|
Position: -143
Score: 5.2 Sequence: TGTGATAAGCATTCTCAAT
Locus tag: BLi02443
|
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| BLi02443 | -143 | 5.2 | TGTGATAAGCATTCTCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fer | ||||
| Ortholog function: Ferredoxin | ||||
| Bacillus licheniformis DSM 13 | BLi02443 | -143 | 5.2 | TGTGATAAGCATTCTCAAT |
| Anoxybacillus flavithermus WK1 | Aflv_1057 | -132 | 5.3 | ACTGATAAGCATTTTCAGT |
|
Position: -79
Score: 4.9 Sequence: ATTTATAATGATTATAGTT
Locus tag: BLi02503
|
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| BLi02503 | -79 | 4.9 | ATTTATAATGATTATAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fur | ||||
| Ortholog function: Transcriptional regulator for iron transport and metabolism, Fur family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_021640 | -118 | 4.8 | TTTTAGAATGATTATCACA |
| Bacillus pumilus SAFR-032 | BPUM_2084 | -78 | 4.7 | ATTTAAAATGATTATAGTT |
| Bacillus licheniformis DSM 13 | BLi02503 | -119 | 5 | ATTTATAATGATTATTAAA |
| -79 | 4.9 | ATTTATAATGATTATAGTT | ||
| Geobacillus kaustophilus HTA426 | GK2317 | -102 | 5.3 | TATAATAACCATTATCATT |
| Bacillus cereus ATCC 14579 | BC4091 | -101 | 5.8 | TTTGAGAATAATTATCAAT |
| Bacillus halodurans C-125 | BH1527 | -103 | 4.7 | ACTAATAATAATTATCTGT |
| -79 | 5.4 | AATAATAATCATTATTAAT | ||
| Bacillus clausii KSM-K16 | ABC1780 | -102 | 4.9 | AATGATATTCATTTGCAGA |
| Oceanobacillus iheyensis HTE831 | OB1849 | -96 | 4.8 | TATTATAATTATTATAATT |
| Paenibacillus sp. JDR-2 | Pjdr2_1270 | -77 | 5.1 | AATTATAATCATTCTAAAT |
|
Position: -53
Score: 5.8 Sequence: ATTGATAATGATTCTCTTT
Locus tag: BLi02658
|
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| BLi02658 | -53 | 5.8 | ATTGATAATGATTCTCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuD | ||||
| Ortholog function: Ferrichrome-binding periplasmic protein precursor (TC 3.A.1.14.3) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33320 | -184 | 6.4 | ACTGATAATGATTATCAAT |
| -51 | 5.3 | GATGATAATGATTCTCTTT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_030440 | -187 | 6.7 | AATGATAATGATTATCAAT |
| -51 | 5.5 | ACTGATAATGATTCTCTTT | ||
| Bacillus pumilus SAFR-032 | BPUM_2994 | -220 | 6.7 | AATGATAATGATTATCAAT |
| -44 | 6 | ATTGAGAATCATTATCATA | ||
| Bacillus licheniformis DSM 13 | BLi02658 | -53 | 5.8 | ATTGATAATGATTCTCTTT |
|
Position: -241
Score: 6.3 Sequence: AATGATTATCATTATCATT
Position: -41
Score: 6 Sequence: AATGAAAATGATTATCAAC
Locus tag: BLi02811
|
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| BLi02811 | -241 | 6.3 | AATGATTATCATTATCATT | |
| -41 | 6 | AATGAAAATGATTATCAAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nikA | ||||
| Ortholog function: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | ||||
| Bacillus pumilus SAFR-032 | BPUM_3070 | -40 | 5.7 | AATGAAAATGATTATCAGC |
| -34 | 5.1 | AATGATTATCAGCATCAAT | ||
| Bacillus licheniformis DSM 13 | BLi02811 | -241 | 6.3 | AATGATTATCATTATCATT |
| -41 | 6 | AATGAAAATGATTATCAAC | ||
| Bacillus halodurans C-125 | BH0567 | -51 | 6.1 | TTTGAAAATGATTATCATT |
| -35 | 4.6 | ATTGTTAATTATATTCAGA | ||
|
Position: -36
Score: 4.9 Sequence: ATTAAGAACAATTTTCATT
Locus tag: BLi03393
|
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| BLi03393 | -36 | 4.9 | ATTAAGAACAATTTTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yumC | ||||
| Ortholog function: Ferredoxin--NADP reductase 2 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32110 | -36 | 5.2 | ATTAATAACAATTTTCATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_029160 | -35 | 5.2 | ATTAATAACAATTTTCAAT |
| Bacillus pumilus SAFR-032 | BPUM_2873 | -35 | 5.6 | AGTGATAACAATTTTCATT |
| Bacillus licheniformis DSM 13 | BLi03393 | -36 | 4.9 | ATTAAGAACAATTTTCATT |
| Bacillus clausii KSM-K16 | ABC2925 | -39 | 4.9 | AATGAGAAAGGATTTCATT |
| Oceanobacillus iheyensis HTE831 | OB2351 | -324 | 5 | TATCATTTTCATTATCAAT |
|
Position: -81
Score: 5.8 Sequence: ATTGAAAATGATTTTCAAG
Locus tag: BLi03474
|
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| BLi03474 | -81 | 5.8 | ATTGAAAATGATTTTCAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfiZ | ||||
| Ortholog function: Iron(III) siderophore transport permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08450 | -115 | 6.2 | ATTGAAATTCATTATCATT |
| -58 | 4.9 | ATTGAGGATTATTCTCAAA | ||
| Bacillus licheniformis DSM 13 | BLi03474 | -81 | 5.8 | ATTGAAAATGATTTTCAAG |
| Anoxybacillus flavithermus WK1 | Aflv_1267 | -153 | 5.4 | TTTGAAAATGATTTTCGTT |
| -113 | 6.2 | AATGATAATCATTGTCAAT | ||
| -29 | 4.9 | ACTGATATTCGATATCAAA | ||
| Geobacillus kaustophilus HTA426 | GK1459 | -181 | 5.8 | TTTGATAATGAATTTCATT |
| -141 | 5.2 | AGTGAGAATCATTGTCAAC | ||
| -68 | 5 | GATGAGAGTCATTATCAAA | ||
|
Position: -46
Score: 5.5 Sequence: AATGATAATCGTTATCGGT
Locus tag: BLi03521
|
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| BLi03521 | -46 | 5.5 | AATGATAATCGTTATCGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhuB | ||||
| Ortholog function: Ferrichrome transport system permease protein FhuB (TC 3.A.1.14.3) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33310 | -65 | 5.3 | AAAGAGAATCATTATCATC |
| Bacillus amyloliquefaciens FZB42 | RBAM_030430 | -185 | 5.5 | AAAGAGAATCATTATCAGT |
| -49 | 6.7 | ATTGATAATCATTATCATT | ||
| Bacillus pumilus SAFR-032 | BPUM_2992 | -234 | 6 | TATGATAATGATTCTCAAT |
| -58 | 6.7 | ATTGATAATCATTATCATT | ||
| Bacillus licheniformis DSM 13 | BLi03521 | -46 | 5.5 | AATGATAATCGTTATCGGT |
| Bacillus halodurans C-125 | BH1083 | -51 | 6.5 | AGTGATAATGATTATCAAT |
|
Position: -94
Score: 6.2 Sequence: AACGATAATGATTATCATT
Position: -88
Score: 6.4 Sequence: AATGATTATCATTATCAAT
Locus tag: BLi03902
|
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| BLi03902 | -94 | 6.2 | AACGATAATGATTATCATT | |
| -88 | 6.4 | AATGATTATCATTATCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dhbA | ||||
| Ortholog function: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32000 | -121 | 4.6 | TATGATTATTTTTATAATT |
| -99 | 6.7 | AATGATAATCATTATCAAT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_029050 | -53 | 6.7 | AATGATAATCATTATCAAT |
| Bacillus licheniformis DSM 13 | BLi03902 | -88 | 6.4 | AATGATTATCATTATCAAT |
| Bacillus cereus ATCC 14579 | BC2302 | -158 | 6 | AATGAAAAACATTATCAAT |
| -64 | 6.2 | AATGAAAATCAATATCATT | ||
| Oceanobacillus iheyensis HTE831 | OB0954 | -107 | 6.7 | AATGATAATCATTATCATT |
| -37 | 6.4 | ATTGAGAATGATTATCAAT | ||
|
Position: -41
Score: 6.1 Sequence: ATTGATAATAGTTATCAAT
Locus tag: BLi03906
|
||||
| BLi03906 | -41 | 6.1 | ATTGATAATAGTTATCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feuA | ||||
| Ortholog function: Fe3+-bacillibactin ABC transporter substrate-binding protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU01630 | -38 | 6.1 | ATTGATAATAGTTATCAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_002120 | -38 | 6.1 | ATTGATAATAGTTATCAAT |
| Bacillus pumilus SAFR-032 | BPUM_3701 | -34 | 5.5 | ATTGAGAACAATTATCAGT |
| Bacillus licheniformis DSM 13 | BLi03906 | -302 | 5.1 | TATCATTATGATTTTCATT |
| -41 | 6.1 | ATTGATAATAGTTATCAAT | ||
|
Position: -58
Score: 5.6 Sequence: AATGCGAATCATTATCACT
Locus tag: BLi04262
|
||||
| BLi04262 | -58 | 5.6 | AATGCGAATCATTATCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yxeB | ||||
| Ortholog function: Fe3+-hydroxamate ABC transporter substrate-binding protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39610 | -55 | 6.4 | ATTGATAATGATAATCATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_036560 | -36 | 6.5 | AATGATAATCATTATCACT |
| Bacillus licheniformis DSM 13 | BLi04262 | -58 | 5.6 | AATGCGAATCATTATCACT |
| Bacillus clausii KSM-K16 | ABC3476 | -49 | 5.8 | GGTGATAATGATTTTCATT |
|
Position: -42
Score: 5.9 Sequence: TATGATAACGATTATCATT
Position: -36
Score: 4.9 Sequence: AACGATTATCATTTTCAGA
Locus tag: BLi04266
|
||||
| BLi04266 | -42 | 5.9 | TATGATAACGATTATCATT | |
| -36 | 4.9 | AACGATTATCATTTTCAGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: Ferrous iron uptake system protein A | ||||
| Bacillus licheniformis DSM 13 | BLi04266 | -42 | 5.9 | TATGATAACGATTATCATT |
| Anoxybacillus flavithermus WK1 | Aflv_0305 | -38 | 5.6 | ATTGAAAAAGGTTATCATT |
| Geobacillus kaustophilus HTA426 | GK1849 | -59 | 4.8 | ATTGAGAAAAAGAATCATT |
| Bacillus cereus ATCC 14579 | BC4807 | -39 | 5.9 | TTTGAAAATAATTATCATT |