Propagation of CcpA regulog to Bacillus halodurans C-125
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus halodurans C-125 |
| Orthologous TF(s) | BH3241 |
| Regulated genes | 54 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -64
Score: 5 Sequence: ATGAAAGCGCATCCAA
Locus tag: BH0193
|
||||
| BH0193 | -64 | 5 | ATGAAAGCGCATCCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ABC3348 | ||||
| Ortholog function: Predicted galactitol operon regulator (transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component | ||||
| Bacillus clausii KSM-K16 | ABC3348 | -63 | 5 | ATGAAAGCGCATACTT |
| Bacillus halodurans C-125 | BH0193 | -64 | 5 | ATGAAAGCGCATCCAA |
| Oceanobacillus iheyensis HTE831 | OB2756 | -67 | 5.1 | ATGAAAACGTATACAT |
|
Position: -223
Score: 5.2 Sequence: ATGAAAGCGTTGACAA
Locus tag: BH0296
|
||||
| BH0296 | -223 | 5.2 | ATGAAAGCGTTGACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bglP1 | ||||
| Ortholog function: PTS system, beta-glucoside-specific enzyme II, ABC component | ||||
| Bacillus clausii KSM-K16 | ABC3790 | -210 | 4.4 | ATGAAAGCGTTGACGG |
| Bacillus halodurans C-125 | BH0296 | -223 | 5.2 | ATGAAAGCGTTGACAA |
| Bacillus licheniformis DSM 13 | BLi04200 | -297 | 5.2 | ATGAAAGCGTTGACAA |
| Bacillus pumilus SAFR-032 | BPUM_0209 | -221 | 4.6 | AAGAAAGCGTTGACAT |
|
Position: -66
Score: 4.9 Sequence: ATGATAGCGCTTTCTT
Locus tag: BH0481
|
||||
| BH0481 | -66 | 4.9 | ATGATAGCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytcP | ||||
| Ortholog function: ABC superfamily ATP binding cassette transporter, membrane protein | ||||
| Bacillus clausii KSM-K16 | ABC1146 | 76 | 4.7 | ATGAAAGCGCTTCCTC |
| Bacillus halodurans C-125 | BH0481 | -66 | 4.9 | ATGATAGCGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi03169 | -97 | 5.1 | TTGACAGCGCTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_2666 | -28 | 5 | ATGATAACGCTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU30170 | -43 | 4.9 | ATGATAACGCTTACAA |
|
Position: -228
Score: 5.1 Sequence: TTGTAAACGCTATCAT
Position: -36
Score: 5.4 Sequence: TTGAAAGCGCTATCAA
Locus tag: BH0483
|
||||
| BH0483 | -228 | 5.1 | TTGTAAACGCTATCAT | |
| -36 | 5.4 | TTGAAAGCGCTATCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rmgR | ||||
| Ortholog function: Transcriptional regulator of rhamnogalacturonan utilization, AraC family | ||||
| Bacillus clausii KSM-K16 | ABC1143 | -40 | 4.8 | ATTTAAGCGCTTTCAT |
| Bacillus clausii KSM-K16 | ABC1143 | -40 | 4.8 | ATTTAAGCGCTTTCAT |
| Bacillus halodurans C-125 | BH0483 | -228 | 5.1 | TTGTAAACGCTATCAT |
| -36 | 5.4 | TTGAAAGCGCTATCAA | ||
| Bacillus halodurans C-125 | BH0483 | -228 | 5.1 | TTGTAAACGCTATCAT |
| -36 | 5.4 | TTGAAAGCGCTATCAA | ||
| Oceanobacillus iheyensis HTE831 | OB2093 | -97 | 5.1 | TTGAAAGCGGTATCAT |
| Oceanobacillus iheyensis HTE831 | OB2093 | -97 | 5.1 | TTGAAAGCGGTATCAT |
|
Position: -293
Score: 5.1 Sequence: TTGATAGCGCTTTCAA
Position: -101
Score: 5 Sequence: ATGATAGCGTTTACAA
Locus tag: BH0484
|
||||
| BH0484 | -293 | 5.1 | TTGATAGCGCTTTCAA | |
| -101 | 5 | ATGATAGCGTTTACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lplB | ||||
| Ortholog function: ABC-type polysaccharide transport system, permease component | ||||
| Bacillus clausii KSM-K16 | ABC1145 | 76 | 4.7 | ATGAAAGCGCTTCCTC |
|
Position: -76
Score: 4.7 Sequence: TTGAAAAGGTTTACAA
Locus tag: BH0701
|
||||
| BH0701 | -76 | 4.7 | TTGAAAAGGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctP | ||||
| Ortholog function: TRAP-type C4-dicarboxylate transport system, periplasmic component | ||||
| Bacillus halodurans C-125 | BH0701 | -76 | 4.7 | TTGAAAAGGTTTACAA |
| Oceanobacillus iheyensis HTE831 | OB3403 | -177 | 5.2 | TTGAAAGCGCTTAAAA |
|
Position: -56
Score: 5 Sequence: TTGAAAGCGCTTAATA
Locus tag: BH0745
|
||||
| BH0745 | -56 | 5 | TTGAAAGCGCTTAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citMII | ||||
| Ortholog function: Magnesium citrate secondary transporter | ||||
| Bacillus clausii KSM-K16 | ABC0100 | -76 | 4.8 | TTGGAAACGGTTACAA |
| Bacillus halodurans C-125 | BH0745 | -56 | 5 | TTGAAAGCGCTTAATA |
| Bacillus pumilus SAFR-032 | BPUM_3618 | -120 | 4.6 | ATGAAAGCGGTTGCCT |
| -32 | 4.5 | ATGTAAACGGTTTATT | ||
|
Position: -85
Score: 5.1 Sequence: TTGTAAACGCTTTCTT
Locus tag: BH0902
|
||||
| BH0902 | -85 | 5.1 | TTGTAAACGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araP | ||||
| Ortholog function: Alpha-arabinosides ABC transport system, permease protein 1 | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025800 | -32 | 4.4 | ATGCAAGCGCTTTATT |
| Bacillus halodurans C-125 | BH0902 | -85 | 5.1 | TTGTAAACGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi03023 | -65 | 5 | TTGTAAGCGTTTTAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28740 | -38 | 5 | TTGAAAGCGTTTTATT |
|
Position: -113
Score: 5 Sequence: ATGTAAACGTTAACAA
Locus tag: BH0905
|
||||
| BH0905 | -113 | 5 | ATGTAAACGTTAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araN | ||||
| Ortholog function: Alpha-arabinosides ABC transport system, substrate-binding protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025810 | -32 | 4.4 | ATGCAAGCGCTTTATT |
| Bacillus halodurans C-125 | BH0905 | -113 | 5 | ATGTAAACGTTAACAA |
| Bacillus licheniformis DSM 13 | BLi03024 | -65 | 5 | TTGTAAGCGTTTTAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28750 | -38 | 5 | TTGAAAGCGTTTTATT |
|
Position: -114
Score: 4.7 Sequence: ATGTAAGCGATTACTT
Locus tag: BH1064
|
||||
| BH1064 | -114 | 4.7 | ATGTAAGCGATTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH1064 | ||||
| Ortholog function: ABC-type sugar transport system, substrate-binding protein | ||||
| Bacillus halodurans C-125 | BH1064 | -114 | 4.7 | ATGTAAGCGATTACTT |
|
Position: -159
Score: 5 Sequence: TTGACAGCGTTTACAA
Locus tag: BH1092
|
||||
| BH1092 | -159 | 5 | TTGACAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: Glycerol uptake facilitator protein | ||||
| Bacillus halodurans C-125 | BH1092 | -159 | 5 | TTGACAGCGTTTACAA |
|
Position: -33
Score: 4.9 Sequence: ATGTAAGCACTTTCAA
Locus tag: BH1117
|
||||
| BH1117 | -33 | 4.9 | ATGTAAGCACTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhiL | ||||
| Ortholog function: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein | ||||
| Bacillus halodurans C-125 | BH1117 | -33 | 4.9 | ATGTAAGCACTTTCAA |
|
Position: -105
Score: 4.7 Sequence: TTGGTAGCGCTTACAT
Locus tag: BH1130
|
||||
| BH1130 | -105 | 4.7 | TTGGTAGCGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngJ | ||||
| Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) | ||||
| Bacillus clausii KSM-K16 | ABC1506 | -77 | 4.6 | TTGGTAACGCTTTCAT |
| Bacillus halodurans C-125 | BH1130 | -105 | 4.7 | TTGGTAGCGCTTACAT |
| Geobacillus kaustophilus HTA426 | GK1597 | -103 | 4.9 | TTGAAAACGCTTCAAA |
|
Position: -119
Score: 4.4 Sequence: AATAAAACGCTTTCAT
Position: -47
Score: 4.6 Sequence: TTGTAAGCGCTACAAT
Locus tag: BH1140
|
||||
| BH1140 | -119 | 4.4 | AATAAAACGCTTTCAT | |
| -47 | 4.6 | TTGTAAGCGCTACAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmX | ||||
| Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2303 | -30 | 4.4 | ATGAAATCGATTACAT |
| Bacillus clausii KSM-K16 | ABC1514 | -48 | 4.6 | ATGAAAGGGGTTACAA |
| Bacillus halodurans C-125 | BH1140 | -47 | 4.6 | TTGTAAGCGCTACAAT |
| Bacillus licheniformis DSM 13 | BLi01052 | -34 | 4.6 | GTTAAAGCGCTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_0922 | -41 | 4.1 | AGTGAAGCGCTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB1134 | -37 | 4.1 | ATGTAATCGTTAACAC |
|
Position: -206
Score: 4.4 Sequence: ATGAAAACGGTTTATG
Locus tag: BH1425
|
||||
| BH1425 | -206 | 4.4 | ATGAAAACGGTTTATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glcK | ||||
| Ortholog function: Glucokinase (EC 2.7.1.2) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0895 | -23 | 4.5 | TTGAAAACGCTTATAC |
| Bacillus cereus ATCC 14579 | BC4260 | -57 | 4.3 | ATGTGAACGTTTTCTT |
| Bacillus halodurans C-125 | BH1425 | -206 | 4.4 | ATGAAAACGGTTTATG |
| Bacillus pumilus SAFR-032 | BPUM_2215 | -49 | 4.2 | CTGAAAGCGCATTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24850 | -79 | 4.7 | TTGTCAGCGTTTTCTT |
|
Position: -117
Score: 4.7 Sequence: TTGTTAGCGCTTTCTT
Locus tag: BH1826
|
||||
| BH1826 | -117 | 4.7 | TTGTTAGCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoR | ||||
| Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008340 | -67 | 5 | TTGAAAGCGCTTTATT |
| Bacillus cereus ATCC 14579 | BC2766 | -78 | 5 | TTGAAAACGCTTTTAT |
| Bacillus halodurans C-125 | BH1826 | -117 | 4.7 | TTGTTAGCGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi00853 | -51 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_0455 | -59 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08100 | -67 | 5 | TTGAAAGCGCTTTATT |
|
Position: -70
Score: 4.8 Sequence: TTTAAAACGCTTACAT
Locus tag: BH1831
|
||||
| BH1831 | -70 | 4.8 | TTTAAAACGCTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lctP | ||||
| Ortholog function: L-lactate permease | ||||
| Bacillus clausii KSM-K16 | ABC0974 | -69 | 4.8 | TTGTAAGTGCTTACAT |
| Bacillus halodurans C-125 | BH1831 | -70 | 4.8 | TTTAAAACGCTTACAT |
|
Position: -40
Score: 4.2 Sequence: TTGTAAGGGTTTTCAC
Locus tag: BH1878
|
||||
| BH1878 | -40 | 4.2 | TTGTAAGGGTTTTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: abnB | ||||
| Ortholog function: Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036390 | -45 | 4.9 | TTGAAAGCGTTTTAAG |
| Bacillus clausii KSM-K16 | ABC3369 | -61 | 4.7 | TTGAAAGCGGTGCCAA |
| Bacillus halodurans C-125 | BH1878 | -40 | 4.2 | TTGTAAGGGTTTTCAC |
| Bacillus licheniformis DSM 13 | BLi04220 | -30 | 5.2 | ATGAAAGCGTTTTAAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39330 | -46 | 5 | ATGTAAGCGTTTAAAA |
|
Position: 15
Score: 4.4 Sequence: GAGAAAGCGCATTCAA
Locus tag: BH1911
|
||||
| BH1911 | 15 | 4.4 | GAGAAAGCGCATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lplB | ||||
| Ortholog function: Transmembrane lipoprotein | ||||
| Bacillus clausii KSM-K16 | ABC1135 | 15 | 4.5 | AAGAAAGCGCATTCAG |
| Bacillus halodurans C-125 | BH1911 | 15 | 4.4 | GAGAAAGCGCATTCAA |
| Paenibacillus sp. JDR-2 | Pjdr2_1934 | 0 | 4.7 | ATGAAAGCGGTCACAA |
|
Position: -202
Score: 4.6 Sequence: TTGTAAGTGTTTTCTT
Locus tag: BH2018
|
||||
| BH2018 | -202 | 4.6 | TTGTAAGTGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ganR | ||||
| Ortholog function: Galactose operon repressor, GalR-LacI family of transcriptional regulators | ||||
| Bacillus halodurans C-125 | BH2018 | -202 | 4.6 | TTGTAAGTGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi04281 | -148 | 4.1 | AATGAAGCGTTTTCAT |
|
Position: -55
Score: 4.4 Sequence: TATAAAACGCTTTCAT
Locus tag: BH2019
|
||||
| BH2019 | -55 | 4.4 | TATAAAACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cycB | ||||
| Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein | ||||
| Bacillus clausii KSM-K16 | ABC3520 | -37 | 4.6 | AAGAAAGCGGTTACTT |
| Bacillus halodurans C-125 | BH2019 | -55 | 4.4 | TATAAAACGCTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3613 | -51 | 4.8 | AAGAAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34160 | -39 | 5 | TTTAAAGCGCTTTCAT |
|
Position: -47
Score: 5.1 Sequence: ATGTAAGCGTTTACTA
Locus tag: BH2023
|
||||
| BH2023 | -47 | 5.1 | ATGTAAGCGTTTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ganB | ||||
| Ortholog function: Arabinogalactan endo-1,4-beta-galactosidase precursor (EC 3.2.1.89) | ||||
| Bacillus halodurans C-125 | BH2023 | -47 | 5.1 | ATGTAAGCGTTTACTA |
| Bacillus licheniformis DSM 13 | BLi04276 | -57 | 5.3 | ATGAAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34120 | -36 | 5 | ATGAAAACGCTTGCTA |
|
Position: -48
Score: 5.1 Sequence: TTGAAAGCGTTATCTT
Locus tag: BH2166
|
||||
| BH2166 | -48 | 5.1 | TTGAAAGCGTTATCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kduI | ||||
| Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) | ||||
| Bacillus clausii KSM-K16 | ABC0994 | 33 | 4.5 | TTTAAAACGTATACAA |
| Bacillus halodurans C-125 | BH2166 | -48 | 5.1 | TTGAAAGCGTTATCTT |
| Bacillus licheniformis DSM 13 | BLi03829 | -75 | 4.7 | TTGAAACCGTTACCAA |
| Bacillus pumilus SAFR-032 | BPUM_3246 | -122 | 4.7 | AAGAAAGCGATTTCAA |
| -64 | 4.3 | TTGAAACCGATACCAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU22130 | -65 | 4.7 | TTGAAACCGTTACCAA |
|
Position: -64
Score: 5 Sequence: ATGAAAGCGTTATAAA
Locus tag: BH2206
|
||||
| BH2206 | -64 | 5 | ATGAAAGCGTTATAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: odhA | ||||
| Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_019130 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Bacillus cereus ATCC 14579 | BC1252 | -101 | 4.3 | AAGAAAACATTTACAT |
| Bacillus clausii KSM-K16 | ABC2114 | -63 | 4.8 | TTGTAAGCGCTTGAAA |
| Bacillus halodurans C-125 | BH2206 | -64 | 5 | ATGAAAGCGTTATAAA |
| Bacillus licheniformis DSM 13 | BLi02260 | -100 | 4.3 | GTGGAAGCGTTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_1862 | -101 | 4.7 | TTGGAAGCGTTTTATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU19370 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Geobacillus kaustophilus HTA426 | GK1023 | -123 | 4.1 | GTGAAAACGTTTATAC |
| Oceanobacillus iheyensis HTE831 | OB1089 | -51 | 4.3 | TTTGAACCGTTTTCAT |
| Paenibacillus sp. JDR-2 | Pjdr2_4724 | -242 | 4.4 | ATGAATACGCTTTAAA |
|
Position: -28
Score: 4.5 Sequence: ATGAAAACGATAACAG
Locus tag: BH2216
|
||||
| BH2216 | -28 | 4.5 | ATGAAAACGATAACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007970 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus cereus ATCC 14579 | BC0631 | 234 | 4.4 | TTGATAACGCTTGCAG |
| Bacillus halodurans C-125 | BH2216 | 136 | 4.4 | TTGAAAGCCTTGACAT |
| 318 | 4.4 | GTGAAAACGCTTGCTG | ||
| Bacillus licheniformis DSM 13 | BLi00796 | 318 | 4.6 | GTGAAAACGCTTGCAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07800 | 318 | 4.6 | GTGAAAACGCTTGCAG |
|
Position: -95
Score: 4.5 Sequence: TTGAAAACGCTTACCC
Locus tag: BH2227
|
||||
| BH2227 | -95 | 4.5 | TTGAAAACGCTTACCC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmR | ||||
| Ortholog function: Transcriptional regulator of alpha-galactoside utilization, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_027180 | -91 | 4.8 | TTGAAAACGCTTACTC |
| Bacillus halodurans C-125 | BH2227 | -95 | 4.5 | TTGAAAACGCTTACCC |
| Bacillus licheniformis DSM 13 | BLi01139 | -75 | 4.2 | TTGAAAACTTTTACCT |
| Bacillus pumilus SAFR-032 | BPUM_1754 | -78 | 4.4 | TTGAAAGCGCTTTACC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU30260 | -86 | 4.8 | TTGTAACCGCTTACTT |
|
Position: -151
Score: 4.5 Sequence: AAAAAAGCGTTTACAA
Position: -85
Score: 4.5 Sequence: ATGAAATCGATTTCAA
Locus tag: BH2312
|
||||
| BH2312 | -151 | 4.5 | AAAAAAGCGTTTACAA | |
| -85 | 4.5 | ATGAAATCGATTTCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolA | ||||
| Ortholog function: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) | ||||
| Bacillus halodurans C-125 | BH2312 | -151 | 4.5 | AAAAAAGCGTTTACAA |
| -85 | 4.5 | ATGAAATCGATTTCAA | ||
|
Position: -281
Score: 4.8 Sequence: TTGAAAACGATTTCAG
Position: -142
Score: 4.5 Sequence: CTGAAAGCGCTTTTAA
Position: -44
Score: 4.5 Sequence: ATGAAATCGATTACAA
Locus tag: BH2320
|
||||
| BH2320 | -281 | 4.8 | TTGAAAACGATTTCAG | |
| -142 | 4.5 | CTGAAAGCGCTTTTAA | ||
| -44 | 4.5 | ATGAAATCGATTACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolB | ||||
| Ortholog function: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036770 | -177 | 4.5 | ATGTAACCGTTTGCTT |
| -102 | 4.8 | TTGTAAGCGTTTAATT | ||
| 67 | 4.5 | ATGAAGACGTTATCAA | ||
| Bacillus clausii KSM-K16 | ABC0423 | -35 | 4.5 | ATGAAAGCGGTTTACT |
| Bacillus halodurans C-125 | BH2320 | -281 | 4.8 | TTGAAAACGATTTCAG |
| -142 | 4.5 | CTGAAAGCGCTTTTAA | ||
| -44 | 4.5 | ATGAAATCGATTACAA | ||
| Bacillus licheniformis DSM 13 | BLi04250 | -196 | 4.3 | GTGTAAACGTTTTATT |
| -132 | 4.8 | TTGTAAGCGTTTAATT | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39750 | -106 | 4.9 | TTGAAAGCGTTTAATT |
|
Position: -32
Score: 5.3 Sequence: ATGTAAACGCTTTCAT
Locus tag: BH2717
|
||||
| BH2717 | -32 | 5.3 | ATGTAAACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glsA1 | ||||
| Ortholog function: Glutaminase (EC 3.5.1.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002800 | -62 | 5 | TTGAAAACGTTTTCCA |
| Bacillus halodurans C-125 | BH2717 | -32 | 5.3 | ATGTAAACGCTTTCAT |
| Bacillus licheniformis DSM 13 | BLi00274 | -208 | 4.9 | TTGAAAACGCTTATAT |
| Bacillus pumilus SAFR-032 | BPUM_0244 | -216 | 5.2 | ATGTAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU02430 | -81 | 4.4 | ATGAAAGCGTTTAACG |
|
Position: -33
Score: 4.7 Sequence: TTGATAACGCTTACTT
Locus tag: BH2757
|
||||
| BH2757 | -33 | 4.7 | TTGATAACGCTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
| Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
| Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
| Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
|
Position: -168
Score: 4.5 Sequence: AAGAAAACGTTTAAAA
Locus tag: BH2819
|
||||
| BH2819 | -168 | 4.5 | AAGAAAACGTTTAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgW | ||||
| Ortholog function: Alkaliphily related protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023130 | -61 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus clausii KSM-K16 | ABC2498 | -57 | 4.5 | ATGAAAACGGGTACAA |
| Bacillus halodurans C-125 | BH2819 | -168 | 4.5 | AAGAAAACGTTTAAAA |
| Bacillus licheniformis DSM 13 | BLi02654 | -66 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus pumilus SAFR-032 | BPUM_2210 | -40 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24800 | -88 | 4.8 | ATGAAAACGCTATCGA |
|
Position: -112
Score: 4.5 Sequence: TTTTAAACGTTTTCTT
Locus tag: BH2820
|
||||
| BH2820 | -112 | 4.5 | TTTTAAACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgX | ||||
| Ortholog function: Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023120 | -109 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus clausii KSM-K16 | ABC2499 | -98 | 4.3 | TTGTACCCGTTTTCAT |
| Bacillus halodurans C-125 | BH2820 | -112 | 4.5 | TTTTAAACGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02653 | -105 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_2209 | -103 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24790 | -84 | 4.3 | TCGATAGCGTTTTCAT |
|
Position: -127
Score: 5.1 Sequence: TTGAAAGCGCTTTCGA
Locus tag: BH3232
|
||||
| BH3232 | -127 | 5.1 | TTGAAAGCGCTTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bglS | ||||
| Ortholog function: Endo-beta-1,3-1,4 glucanase (Licheninase) (EC 3.2.1.73) | ||||
| Bacillus halodurans C-125 | BH3232 | -127 | 5.1 | TTGAAAGCGCTTTCGA |
|
Position: 6
Score: 4.4 Sequence: TTGCAAGCGCTTCCAG
Locus tag: BH3234
|
||||
| BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0462 | 237 | 4.9 | ATGAAAGAGTTTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA |
| Bacillus clausii KSM-K16 | ABC2760 | -65 | 4.7 | TTGAAAACGTTACCTT |
| 0 | 4.8 | ATGAAAGCGCTTCCTG | ||
| Bacillus halodurans C-125 | BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG |
| Bacillus licheniformis DSM 13 | BLi03119 | 6 | 4.7 | TTGAAAGCGCTGCCAG |
| Bacillus pumilus SAFR-032 | BPUM_2616 | -30 | 4.7 | TTGTAAACGTATGCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -101 | 4.5 | TATAAAGCGTTTTCAA |
| 6 | 4.8 | TTGAAAGCGTTACCAG | ||
| Oceanobacillus iheyensis HTE831 | OB0022 | -36 | 4.5 | TTGTAATCGTTTGCAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3796 | -56 | 5 | TTGAAAGCGTATTCTT |
|
Position: -64
Score: 5 Sequence: ATGACAACGCTTTCAT
Locus tag: BH3442
|
||||
| BH3442 | -64 | 5 | ATGACAACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araF | ||||
| Ortholog function: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) | ||||
| Bacillus clausii KSM-K16 | ABC0409 | -35 | 5.4 | TTGAAAGCGTTATCAA |
| Bacillus halodurans C-125 | BH3442 | -64 | 5 | ATGACAACGCTTTCAT |
| Bacillus licheniformis DSM 13 | BLi00442 | -128 | 4.8 | ATGTAAGCGCTTCAAA |
| Geobacillus kaustophilus HTA426 | GK1910 | -129 | 4.4 | TTGAAAACGCTTCAAC |
|
Position: -19
Score: 4.6 Sequence: TTGAAAGGGGTTTCAT
Locus tag: BH3448
|
||||
| BH3448 | -19 | 4.6 | TTGAAAGGGGTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsB | ||||
| Ortholog function: ABC-type sugar transport system, periplasmic component | ||||
| Bacillus halodurans C-125 | BH3448 | -19 | 4.6 | TTGAAAGGGGTTTCAT |
| Bacillus licheniformis DSM 13 | BLi00439 | -41 | 4.7 | TTGTAAACGCTGTCTT |
| Paenibacillus sp. JDR-2 | Pjdr2_0664 | -35 | 4.7 | ATGAAAGCGGTTTTTT |
|
Position: -71
Score: 4.4 Sequence: TCGTAAGCGCTTACAG
Locus tag: BH3563
|
||||
| BH3563 | -71 | 4.4 | TCGTAAGCGCTTACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sigL | ||||
| Ortholog function: DNA-directed RNA polymerase sigma subunit SigL | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2521 | 211 | 4.9 | ATGTAAGCGTTTTTAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_031510 | 567 | 4.5 | TGGAAAGCGCTTACAC |
| Bacillus cereus ATCC 14579 | BC5143 | 488 | 4.6 | ATTGAAGCGCTTACAA |
| Bacillus clausii KSM-K16 | ABC3025 | 544 | 4.1 | TTGACATCGTTTTAAA |
| Bacillus halodurans C-125 | BH3563 | -71 | 4.4 | TCGTAAGCGCTTACAG |
| Bacillus licheniformis DSM 13 | BLi03678 | 250 | 4.4 | TTAAAAGCGCTTTGAA |
| Bacillus pumilus SAFR-032 | BPUM_3063 | 951 | 4.7 | ATGAAACCGCTTACGA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34200 | 564 | 4.6 | TGGAAAACGCTTTCAG |
| Geobacillus kaustophilus HTA426 | GK3061 | 96 | 4.7 | TTGGAAGCGTTTTTAT |
|
Position: 6
Score: 4.9 Sequence: AGGAAAACGCTTACAA
Locus tag: BH3680
|
||||
| BH3680 | 6 | 4.9 | AGGAAAACGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3680 | ||||
| Ortholog function: Predicted beta-xyloside ABC transporter, substrate-binding component | ||||
| Bacillus halodurans C-125 | BH3680 | 6 | 4.9 | AGGAAAACGCTTACAA |
| Oceanobacillus iheyensis HTE831 | OB3123 | 9 | 4.7 | AAGAAAGCGTTTACAG |
| Paenibacillus sp. JDR-2 | Pjdr2_0728 | -8 | 4.6 | TTGTAAACGTGTTCAA |
|
Position: -65
Score: 5 Sequence: ATGTAAGCGCTTAAAT
Locus tag: BH3801
|
||||
| BH3801 | -65 | 5 | ATGTAAGCGCTTAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgA | ||||
| Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2739 | -16 | 4.7 | TTGAAAGGGCTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022450 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus halodurans C-125 | BH3801 | -65 | 5 | ATGTAAGCGCTTAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3373 | -32 | 4.9 | ATGTAAGCGGTAACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24170 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Geobacillus kaustophilus HTA426 | GK3397 | -40 | 4.6 | TTGTAATCGCTTTCTT |
|
Position: -194
Score: 4.8 Sequence: TTGGAAACGCTTTAAA
Locus tag: BH3823
|
||||
| BH3823 | -194 | 4.8 | TTGGAAACGCTTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pta | ||||
| Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034850 | -99 | 5 | TTGAAAGCGCTATAAT |
| Bacillus clausii KSM-K16 | ABC3910 | -143 | 4.3 | TTGAAAACCCTTTCCT |
| -124 | 4.5 | ATGGAAGCGTAATCTA | ||
| Bacillus halodurans C-125 | BH3823 | -194 | 4.8 | TTGGAAACGCTTTAAA |
| Bacillus licheniformis DSM 13 | BLi03997 | -104 | 4.3 | GTGTAAACGTTATAAT |
| Bacillus pumilus SAFR-032 | BPUM_3415 | -100 | 4.9 | TTGTAAGCGCTATAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37660 | -100 | 5 | ATGAAAGCGCTATAAT |
| -38 | 4 | AAGAAAGCGTTTTTGT | ||
|
Position: -114
Score: 4.7 Sequence: TTTAAAGCGTTTCCAA
Locus tag: BH3824
|
||||
| BH3824 | -114 | 4.7 | TTTAAAGCGTTTCCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3824 | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Bacillus halodurans C-125 | BH3824 | -114 | 4.7 | TTTAAAGCGTTTCCAA |
|
Position: -41
Score: 4.8 Sequence: ATGAAAGCGTTTATTA
Locus tag: BH3839
|
||||
| BH3839 | -41 | 4.8 | ATGAAAGCGTTTATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citS | ||||
| Ortholog function: Two-component sensor kinase | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007780 | 1297 | 4.5 | TTGATAACGCTTTCGA |
| Bacillus cereus ATCC 14579 | BC0936 | -187 | 4.9 | ATGAAAGCGTGTTCAT |
| Bacillus clausii KSM-K16 | ABC1011 | -42 | 4.2 | TTGAAACCGTTATACT |
| Bacillus halodurans C-125 | BH3839 | -41 | 4.8 | ATGAAAGCGTTTATTA |
| Bacillus licheniformis DSM 13 | BLi00225 | 1303 | 4.5 | TTGATAACGCTTTCGA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07580 | 1297 | 4.5 | TTGATAACGCTTTCGA |
|
Position: -81
Score: 4.9 Sequence: ATGAAAGCGATTTCTT
Position: 24
Score: 4.6 Sequence: ATGATAGCGCTTTCTG
Locus tag: BH3845
|
||||
| BH3845 | -81 | 4.9 | ATGAAAGCGATTTCTT | |
| 24 | 4.6 | ATGATAGCGCTTTCTG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3845 | ||||
| Ortholog function: Predicted beta-glucoside-regulated ABC transport system, sugar-binding protein | ||||
| Bacillus halodurans C-125 | BH3845 | -81 | 4.9 | ATGAAAGCGATTTCTT |
| 24 | 4.6 | ATGATAGCGCTTTCTG | ||
| Bacillus pumilus SAFR-032 | BPUM_3238 | -37 | 4.9 | TTGATAACGCTTACAA |
| Geobacillus kaustophilus HTA426 | GK3207 | -41 | 4.6 | TTGAAAGGGGTTTCAA |
|
Position: -39
Score: 4.3 Sequence: ATGAGAGCGCTTTATT
Locus tag: BH3854
|
||||
| BH3854 | -39 | 4.3 | ATGAGAGCGCTTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS family mannitol-permease II, BC component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1566 | -58 | 4.5 | CTGTAAGCGCTTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_004230 | -96 | 4.6 | TTGTAAGCGTTTTATG |
| Bacillus halodurans C-125 | BH3854 | -39 | 4.3 | ATGAGAGCGCTTTATT |
| Bacillus licheniformis DSM 13 | BLi00505 | -94 | 4.4 | CTGTAAGCGTTTTAAT |
| Bacillus pumilus SAFR-032 | BPUM_0369 | -106 | 4.1 | GTGAAAGCGTTTTACG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU03981 | -95 | 4 | CTGTAAGCGTTTTAAC |
| Geobacillus kaustophilus HTA426 | GK1948 | -54 | 4.8 | TTGTAAGCGTTTTAAG |
| Oceanobacillus iheyensis HTE831 | OB2603 | -75 | 4.4 | TTGTAAGCGGATTCCT |
| Paenibacillus sp. JDR-2 | Pjdr2_6226 | -33 | 4.1 | AAGAAAGCGATTTTAT |
|
Position: -36
Score: 4.2 Sequence: GTGAAAGCGCTTATCA
Locus tag: BH3921
|
||||
| BH3921 | -36 | 4.2 | GTGAAAGCGCTTATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gmuB | ||||
| Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_035870 | -38 | 4.7 | ATGAAAACGTTTTAAC |
| Bacillus clausii KSM-K16 | ABC0481 | -60 | 4.9 | TTGTAAGCGGATTCAT |
| Bacillus halodurans C-125 | BH3921 | -36 | 4.2 | GTGAAAGCGCTTATCA |
| Bacillus licheniformis DSM 13 | BLi02564 | -34 | 4.8 | GTGAAAGCGCTTTTAA |
| Bacillus pumilus SAFR-032 | BPUM_2121 | -37 | 4.2 | CTGGAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU05810 | -33 | 5 | ATGTAAGCGTTTTAAT |
| Geobacillus kaustophilus HTA426 | GK1859 | -50 | 4.8 | TTGAAAACGATATCAT |
| Oceanobacillus iheyensis HTE831 | OB2760 | -62 | 4.8 | TTGTAACCGTTTTCTT |
|
Position: -113
Score: 4.5 Sequence: AATAAAGCGCTTTCAT
Locus tag: BH3926
|
||||
| BH3926 | -113 | 4.5 | AATAAAGCGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dagA | ||||
| Ortholog function: Putative amino acid transporter | ||||
| Bacillus halodurans C-125 | BH3926 | -113 | 4.5 | AATAAAGCGCTTTCAT |
| Bacillus licheniformis DSM 13 | BLi04274 | -107 | 4.9 | ATGTAAGCGATTACAT |
| -33 | 5.1 | ATGAAAGCGTTATCTT | ||