Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH3241
Regulated genes 54
Built upon 559 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -64
Score: 5
Sequence: ATGAAAGCGCATCCAA
Locus tag: BH0193
BH0193 -64 5 ATGAAAGCGCATCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ABC3348
Ortholog function: Predicted galactitol operon regulator (transcriptional antiterminator), BglG family / PTS system, mannitol/fructose-specific IIA component
Bacillus clausii KSM-K16 ABC3348 -63 5 ATGAAAGCGCATACTT
Bacillus halodurans C-125 BH0193 -64 5 ATGAAAGCGCATCCAA
Oceanobacillus iheyensis HTE831 OB2756 -67 5.1 ATGAAAACGTATACAT
Position: -223
Score: 5.2
Sequence: ATGAAAGCGTTGACAA
Locus tag: BH0296
BH0296 -223 5.2 ATGAAAGCGTTGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglP1
Ortholog function: PTS system, beta-glucoside-specific enzyme II, ABC component
Bacillus clausii KSM-K16 ABC3790 -210 4.4 ATGAAAGCGTTGACGG
Bacillus halodurans C-125 BH0296 -223 5.2 ATGAAAGCGTTGACAA
Bacillus licheniformis DSM 13 BLi04200 -297 5.2 ATGAAAGCGTTGACAA
Bacillus pumilus SAFR-032 BPUM_0209 -221 4.6 AAGAAAGCGTTGACAT
Position: -66
Score: 4.9
Sequence: ATGATAGCGCTTTCTT
Locus tag: BH0481
BH0481 -66 4.9 ATGATAGCGCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytcP
Ortholog function: ABC superfamily ATP binding cassette transporter, membrane protein
Bacillus clausii KSM-K16 ABC1146 76 4.7 ATGAAAGCGCTTCCTC
Bacillus halodurans C-125 BH0481 -66 4.9 ATGATAGCGCTTTCTT
Bacillus licheniformis DSM 13 BLi03169 -97 5.1 TTGACAGCGCTTACAA
Bacillus pumilus SAFR-032 BPUM_2666 -28 5 ATGATAACGCTTTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU30170 -43 4.9 ATGATAACGCTTACAA
Position: -228
Score: 5.1
Sequence: TTGTAAACGCTATCAT
Position: -36
Score: 5.4
Sequence: TTGAAAGCGCTATCAA
Locus tag: BH0483
BH0483 -228 5.1 TTGTAAACGCTATCAT
-36 5.4 TTGAAAGCGCTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rmgR
Ortholog function: Transcriptional regulator of rhamnogalacturonan utilization, AraC family
Bacillus clausii KSM-K16 ABC1143 -40 4.8 ATTTAAGCGCTTTCAT
Bacillus clausii KSM-K16 ABC1143 -40 4.8 ATTTAAGCGCTTTCAT
Bacillus halodurans C-125 BH0483 -228 5.1 TTGTAAACGCTATCAT
-36 5.4 TTGAAAGCGCTATCAA
Bacillus halodurans C-125 BH0483 -228 5.1 TTGTAAACGCTATCAT
-36 5.4 TTGAAAGCGCTATCAA
Oceanobacillus iheyensis HTE831 OB2093 -97 5.1 TTGAAAGCGGTATCAT
Oceanobacillus iheyensis HTE831 OB2093 -97 5.1 TTGAAAGCGGTATCAT
Position: -293
Score: 5.1
Sequence: TTGATAGCGCTTTCAA
Position: -101
Score: 5
Sequence: ATGATAGCGTTTACAA
Locus tag: BH0484
BH0484 -293 5.1 TTGATAGCGCTTTCAA
-101 5 ATGATAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lplB
Ortholog function: ABC-type polysaccharide transport system, permease component
Bacillus clausii KSM-K16 ABC1145 76 4.7 ATGAAAGCGCTTCCTC
Position: -76
Score: 4.7
Sequence: TTGAAAAGGTTTACAA
Locus tag: BH0701
BH0701 -76 4.7 TTGAAAAGGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dctP
Ortholog function: TRAP-type C4-dicarboxylate transport system, periplasmic component
Bacillus halodurans C-125 BH0701 -76 4.7 TTGAAAAGGTTTACAA
Oceanobacillus iheyensis HTE831 OB3403 -177 5.2 TTGAAAGCGCTTAAAA
Position: -56
Score: 5
Sequence: TTGAAAGCGCTTAATA
Locus tag: BH0745
BH0745 -56 5 TTGAAAGCGCTTAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citMII
Ortholog function: Magnesium citrate secondary transporter
Bacillus clausii KSM-K16 ABC0100 -76 4.8 TTGGAAACGGTTACAA
Bacillus halodurans C-125 BH0745 -56 5 TTGAAAGCGCTTAATA
Bacillus pumilus SAFR-032 BPUM_3618 -120 4.6 ATGAAAGCGGTTGCCT
-32 4.5 ATGTAAACGGTTTATT
Position: -85
Score: 5.1
Sequence: TTGTAAACGCTTTCTT
Locus tag: BH0902
BH0902 -85 5.1 TTGTAAACGCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araP
Ortholog function: Alpha-arabinosides ABC transport system, permease protein 1
Bacillus amyloliquefaciens FZB42 RBAM_025800 -32 4.4 ATGCAAGCGCTTTATT
Bacillus halodurans C-125 BH0902 -85 5.1 TTGTAAACGCTTTCTT
Bacillus licheniformis DSM 13 BLi03023 -65 5 TTGTAAGCGTTTTAAT
Bacillus subtilis subsp. subtilis str. 168 BSU28740 -38 5 TTGAAAGCGTTTTATT
Position: -113
Score: 5
Sequence: ATGTAAACGTTAACAA
Locus tag: BH0905
BH0905 -113 5 ATGTAAACGTTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araN
Ortholog function: Alpha-arabinosides ABC transport system, substrate-binding protein
Bacillus amyloliquefaciens FZB42 RBAM_025810 -32 4.4 ATGCAAGCGCTTTATT
Bacillus halodurans C-125 BH0905 -113 5 ATGTAAACGTTAACAA
Bacillus licheniformis DSM 13 BLi03024 -65 5 TTGTAAGCGTTTTAAT
Bacillus subtilis subsp. subtilis str. 168 BSU28750 -38 5 TTGAAAGCGTTTTATT
Position: -114
Score: 4.7
Sequence: ATGTAAGCGATTACTT
Locus tag: BH1064
BH1064 -114 4.7 ATGTAAGCGATTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH1064
Ortholog function: ABC-type sugar transport system, substrate-binding protein
Bacillus halodurans C-125 BH1064 -114 4.7 ATGTAAGCGATTACTT
Position: -159
Score: 5
Sequence: TTGACAGCGTTTACAA
Locus tag: BH1092
BH1092 -159 5 TTGACAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: Glycerol uptake facilitator protein
Bacillus halodurans C-125 BH1092 -159 5 TTGACAGCGTTTACAA
Position: -33
Score: 4.9
Sequence: ATGTAAGCACTTTCAA
Locus tag: BH1117
BH1117 -33 4.9 ATGTAAGCACTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhiL
Ortholog function: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Bacillus halodurans C-125 BH1117 -33 4.9 ATGTAAGCACTTTCAA
Position: -105
Score: 4.7
Sequence: TTGGTAGCGCTTACAT
Locus tag: BH1130
BH1130 -105 4.7 TTGGTAGCGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yngJ
Ortholog function: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
Bacillus clausii KSM-K16 ABC1506 -77 4.6 TTGGTAACGCTTTCAT
Bacillus halodurans C-125 BH1130 -105 4.7 TTGGTAGCGCTTACAT
Geobacillus kaustophilus HTA426 GK1597 -103 4.9 TTGAAAACGCTTCAAA
Position: -119
Score: 4.4
Sequence: AATAAAACGCTTTCAT
Position: -47
Score: 4.6
Sequence: TTGTAAGCGCTACAAT
Locus tag: BH1140
BH1140 -119 4.4 AATAAAACGCTTTCAT
-47 4.6 TTGTAAGCGCTACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: msmX
Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19)
Anoxybacillus flavithermus WK1 Aflv_2303 -30 4.4 ATGAAATCGATTACAT
Bacillus clausii KSM-K16 ABC1514 -48 4.6 ATGAAAGGGGTTACAA
Bacillus halodurans C-125 BH1140 -47 4.6 TTGTAAGCGCTACAAT
Bacillus licheniformis DSM 13 BLi01052 -34 4.6 GTTAAAGCGCTTACAT
Bacillus pumilus SAFR-032 BPUM_0922 -41 4.1 AGTGAAGCGCTTTCAA
Oceanobacillus iheyensis HTE831 OB1134 -37 4.1 ATGTAATCGTTAACAC
Position: -206
Score: 4.4
Sequence: ATGAAAACGGTTTATG
Locus tag: BH1425
BH1425 -206 4.4 ATGAAAACGGTTTATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcK
Ortholog function: Glucokinase (EC 2.7.1.2)
Anoxybacillus flavithermus WK1 Aflv_0895 -23 4.5 TTGAAAACGCTTATAC
Bacillus cereus ATCC 14579 BC4260 -57 4.3 ATGTGAACGTTTTCTT
Bacillus halodurans C-125 BH1425 -206 4.4 ATGAAAACGGTTTATG
Bacillus pumilus SAFR-032 BPUM_2215 -49 4.2 CTGAAAGCGCATTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU24850 -79 4.7 TTGTCAGCGTTTTCTT
Position: -117
Score: 4.7
Sequence: TTGTTAGCGCTTTCTT
Locus tag: BH1826
BH1826 -117 4.7 TTGTTAGCGCTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acoR
Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR
Bacillus amyloliquefaciens FZB42 RBAM_008340 -67 5 TTGAAAGCGCTTTATT
Bacillus cereus ATCC 14579 BC2766 -78 5 TTGAAAACGCTTTTAT
Bacillus halodurans C-125 BH1826 -117 4.7 TTGTTAGCGCTTTCTT
Bacillus licheniformis DSM 13 BLi00853 -51 5.1 TTGAAAGCGCTTTTAT
Bacillus pumilus SAFR-032 BPUM_0455 -59 5.1 TTGAAAGCGCTTTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU08100 -67 5 TTGAAAGCGCTTTATT
Position: -70
Score: 4.8
Sequence: TTTAAAACGCTTACAT
Locus tag: BH1831
BH1831 -70 4.8 TTTAAAACGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lctP
Ortholog function: L-lactate permease
Bacillus clausii KSM-K16 ABC0974 -69 4.8 TTGTAAGTGCTTACAT
Bacillus halodurans C-125 BH1831 -70 4.8 TTTAAAACGCTTACAT
Position: -40
Score: 4.2
Sequence: TTGTAAGGGTTTTCAC
Locus tag: BH1878
BH1878 -40 4.2 TTGTAAGGGTTTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: abnB
Ortholog function: Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55)
Bacillus amyloliquefaciens FZB42 RBAM_036390 -45 4.9 TTGAAAGCGTTTTAAG
Bacillus clausii KSM-K16 ABC3369 -61 4.7 TTGAAAGCGGTGCCAA
Bacillus halodurans C-125 BH1878 -40 4.2 TTGTAAGGGTTTTCAC
Bacillus licheniformis DSM 13 BLi04220 -30 5.2 ATGAAAGCGTTTTAAA
Bacillus subtilis subsp. subtilis str. 168 BSU39330 -46 5 ATGTAAGCGTTTAAAA
Position: 15
Score: 4.4
Sequence: GAGAAAGCGCATTCAA
Locus tag: BH1911
BH1911 15 4.4 GAGAAAGCGCATTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lplB
Ortholog function: Transmembrane lipoprotein
Bacillus clausii KSM-K16 ABC1135 15 4.5 AAGAAAGCGCATTCAG
Bacillus halodurans C-125 BH1911 15 4.4 GAGAAAGCGCATTCAA
Paenibacillus sp. JDR-2 Pjdr2_1934 0 4.7 ATGAAAGCGGTCACAA
Position: -202
Score: 4.6
Sequence: TTGTAAGTGTTTTCTT
Locus tag: BH2018
BH2018 -202 4.6 TTGTAAGTGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ganR
Ortholog function: Galactose operon repressor, GalR-LacI family of transcriptional regulators
Bacillus halodurans C-125 BH2018 -202 4.6 TTGTAAGTGTTTTCTT
Bacillus licheniformis DSM 13 BLi04281 -148 4.1 AATGAAGCGTTTTCAT
Position: -55
Score: 4.4
Sequence: TATAAAACGCTTTCAT
Locus tag: BH2019
BH2019 -55 4.4 TATAAAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16 ABC3520 -37 4.6 AAGAAAGCGGTTACTT
Bacillus halodurans C-125 BH2019 -55 4.4 TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032 BPUM_3613 -51 4.8 AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU34160 -39 5 TTTAAAGCGCTTTCAT
Position: -47
Score: 5.1
Sequence: ATGTAAGCGTTTACTA
Locus tag: BH2023
BH2023 -47 5.1 ATGTAAGCGTTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ganB
Ortholog function: Arabinogalactan endo-1,4-beta-galactosidase precursor (EC 3.2.1.89)
Bacillus halodurans C-125 BH2023 -47 5.1 ATGTAAGCGTTTACTA
Bacillus licheniformis DSM 13 BLi04276 -57 5.3 ATGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU34120 -36 5 ATGAAAACGCTTGCTA
Position: -48
Score: 5.1
Sequence: TTGAAAGCGTTATCTT
Locus tag: BH2166
BH2166 -48 5.1 TTGAAAGCGTTATCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: kduI
Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Bacillus clausii KSM-K16 ABC0994 33 4.5 TTTAAAACGTATACAA
Bacillus halodurans C-125 BH2166 -48 5.1 TTGAAAGCGTTATCTT
Bacillus licheniformis DSM 13 BLi03829 -75 4.7 TTGAAACCGTTACCAA
Bacillus pumilus SAFR-032 BPUM_3246 -122 4.7 AAGAAAGCGATTTCAA
-64 4.3 TTGAAACCGATACCAA
Bacillus subtilis subsp. subtilis str. 168 BSU22130 -65 4.7 TTGAAACCGTTACCAA
Position: -64
Score: 5
Sequence: ATGAAAGCGTTATAAA
Locus tag: BH2206
BH2206 -64 5 ATGAAAGCGTTATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: odhA
Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Bacillus amyloliquefaciens FZB42 RBAM_019130 -101 4.7 TTGGAAGCGTTTTTAT
Bacillus cereus ATCC 14579 BC1252 -101 4.3 AAGAAAACATTTACAT
Bacillus clausii KSM-K16 ABC2114 -63 4.8 TTGTAAGCGCTTGAAA
Bacillus halodurans C-125 BH2206 -64 5 ATGAAAGCGTTATAAA
Bacillus licheniformis DSM 13 BLi02260 -100 4.3 GTGGAAGCGTTTTTAT
Bacillus pumilus SAFR-032 BPUM_1862 -101 4.7 TTGGAAGCGTTTTATT
Bacillus subtilis subsp. subtilis str. 168 BSU19370 -101 4.7 TTGGAAGCGTTTTTAT
Geobacillus kaustophilus HTA426 GK1023 -123 4.1 GTGAAAACGTTTATAC
Oceanobacillus iheyensis HTE831 OB1089 -51 4.3 TTTGAACCGTTTTCAT
Paenibacillus sp. JDR-2 Pjdr2_4724 -242 4.4 ATGAATACGCTTTAAA
Position: -28
Score: 4.5
Sequence: ATGAAAACGATAACAG
Locus tag: BH2216
BH2216 -28 4.5 ATGAAAACGATAACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_007970 318 4 GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579 BC0631 234 4.4 TTGATAACGCTTGCAG
Bacillus halodurans C-125 BH2216 136 4.4 TTGAAAGCCTTGACAT
318 4.4 GTGAAAACGCTTGCTG
Bacillus licheniformis DSM 13 BLi00796 318 4.6 GTGAAAACGCTTGCAG
Bacillus subtilis subsp. subtilis str. 168 BSU07800 318 4.6 GTGAAAACGCTTGCAG
Position: -95
Score: 4.5
Sequence: TTGAAAACGCTTACCC
Locus tag: BH2227
BH2227 -95 4.5 TTGAAAACGCTTACCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: msmR
Ortholog function: Transcriptional regulator of alpha-galactoside utilization, LacI family
Bacillus amyloliquefaciens FZB42 RBAM_027180 -91 4.8 TTGAAAACGCTTACTC
Bacillus halodurans C-125 BH2227 -95 4.5 TTGAAAACGCTTACCC
Bacillus licheniformis DSM 13 BLi01139 -75 4.2 TTGAAAACTTTTACCT
Bacillus pumilus SAFR-032 BPUM_1754 -78 4.4 TTGAAAGCGCTTTACC
Bacillus subtilis subsp. subtilis str. 168 BSU30260 -86 4.8 TTGTAACCGCTTACTT
Position: -151
Score: 4.5
Sequence: AAAAAAGCGTTTACAA
Position: -85
Score: 4.5
Sequence: ATGAAATCGATTTCAA
Locus tag: BH2312
BH2312 -151 4.5 AAAAAAGCGTTTACAA
-85 4.5 ATGAAATCGATTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: iolA
Ortholog function: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27)
Bacillus halodurans C-125 BH2312 -151 4.5 AAAAAAGCGTTTACAA
-85 4.5 ATGAAATCGATTTCAA
Position: -281
Score: 4.8
Sequence: TTGAAAACGATTTCAG
Position: -142
Score: 4.5
Sequence: CTGAAAGCGCTTTTAA
Position: -44
Score: 4.5
Sequence: ATGAAATCGATTACAA
Locus tag: BH2320
BH2320 -281 4.8 TTGAAAACGATTTCAG
-142 4.5 CTGAAAGCGCTTTTAA
-44 4.5 ATGAAATCGATTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: iolB
Ortholog function: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Bacillus amyloliquefaciens FZB42 RBAM_036770 -177 4.5 ATGTAACCGTTTGCTT
-102 4.8 TTGTAAGCGTTTAATT
67 4.5 ATGAAGACGTTATCAA
Bacillus clausii KSM-K16 ABC0423 -35 4.5 ATGAAAGCGGTTTACT
Bacillus halodurans C-125 BH2320 -281 4.8 TTGAAAACGATTTCAG
-142 4.5 CTGAAAGCGCTTTTAA
-44 4.5 ATGAAATCGATTACAA
Bacillus licheniformis DSM 13 BLi04250 -196 4.3 GTGTAAACGTTTTATT
-132 4.8 TTGTAAGCGTTTAATT
Bacillus subtilis subsp. subtilis str. 168 BSU39750 -106 4.9 TTGAAAGCGTTTAATT
Position: -32
Score: 5.3
Sequence: ATGTAAACGCTTTCAT
Locus tag: BH2717
BH2717 -32 5.3 ATGTAAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glsA1
Ortholog function: Glutaminase (EC 3.5.1.2)
Bacillus amyloliquefaciens FZB42 RBAM_002800 -62 5 TTGAAAACGTTTTCCA
Bacillus halodurans C-125 BH2717 -32 5.3 ATGTAAACGCTTTCAT
Bacillus licheniformis DSM 13 BLi00274 -208 4.9 TTGAAAACGCTTATAT
Bacillus pumilus SAFR-032 BPUM_0244 -216 5.2 ATGTAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU02430 -81 4.4 ATGAAAGCGTTTAACG
Position: -33
Score: 4.7
Sequence: TTGATAACGCTTACTT
Locus tag: BH2757
BH2757 -33 4.7 TTGATAACGCTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Bacillus amyloliquefaciens FZB42 RBAM_017350 34 5.1 TTGAAAGCGCAAACAA
Bacillus clausii KSM-K16 ABC0572 -72 4.7 TTGACACCGCTTACAA
Bacillus halodurans C-125 BH2757 -33 4.7 TTGATAACGCTTACTT
Bacillus licheniformis DSM 13 BLi04048 -109 4.5 TTGAAAGCGATTAATT
Bacillus subtilis subsp. subtilis str. 168 BSU17600 34 4.7 TTGGAAGCGCAAACAA
Geobacillus kaustophilus HTA426 GK1875 -59 5 ATGAAAGCGTTATAAT
Position: -168
Score: 4.5
Sequence: AAGAAAACGTTTAAAA
Locus tag: BH2819
BH2819 -168 4.5 AAGAAAACGTTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqgW
Ortholog function: Alkaliphily related protein
Bacillus amyloliquefaciens FZB42 RBAM_023130 -61 4.8 ATGAAAACGGTTAAAA
Bacillus clausii KSM-K16 ABC2498 -57 4.5 ATGAAAACGGGTACAA
Bacillus halodurans C-125 BH2819 -168 4.5 AAGAAAACGTTTAAAA
Bacillus licheniformis DSM 13 BLi02654 -66 4.8 ATGAAAACGGTTAAAA
Bacillus pumilus SAFR-032 BPUM_2210 -40 4.8 ATGAAAACGGTTAAAA
Bacillus subtilis subsp. subtilis str. 168 BSU24800 -88 4.8 ATGAAAACGCTATCGA
Position: -112
Score: 4.5
Sequence: TTTTAAACGTTTTCTT
Locus tag: BH2820
BH2820 -112 4.5 TTTTAAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqgX
Ortholog function: Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis
Bacillus amyloliquefaciens FZB42 RBAM_023120 -109 4.4 TTTTAACCGTTTTCAT
Bacillus clausii KSM-K16 ABC2499 -98 4.3 TTGTACCCGTTTTCAT
Bacillus halodurans C-125 BH2820 -112 4.5 TTTTAAACGTTTTCTT
Bacillus licheniformis DSM 13 BLi02653 -105 4.4 TTTTAACCGTTTTCAT
Bacillus pumilus SAFR-032 BPUM_2209 -103 4.4 TTTTAACCGTTTTCAT
Bacillus subtilis subsp. subtilis str. 168 BSU24790 -84 4.3 TCGATAGCGTTTTCAT
Position: -127
Score: 5.1
Sequence: TTGAAAGCGCTTTCGA
Locus tag: BH3232
BH3232 -127 5.1 TTGAAAGCGCTTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglS
Ortholog function: Endo-beta-1,3-1,4 glucanase (Licheninase) (EC 3.2.1.73)
Bacillus halodurans C-125 BH3232 -127 5.1 TTGAAAGCGCTTTCGA
Position: 6
Score: 4.4
Sequence: TTGCAAGCGCTTCCAG
Locus tag: BH3234
BH3234 6 4.4 TTGCAAGCGCTTCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: acsA
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Anoxybacillus flavithermus WK1 Aflv_0462 237 4.9 ATGAAAGAGTTTTCAA
Bacillus amyloliquefaciens FZB42 RBAM_026800 -102 4.5 TATAAAGCGTTTTCAA
Bacillus clausii KSM-K16 ABC2760 -65 4.7 TTGAAAACGTTACCTT
0 4.8 ATGAAAGCGCTTCCTG
Bacillus halodurans C-125 BH3234 6 4.4 TTGCAAGCGCTTCCAG
Bacillus licheniformis DSM 13 BLi03119 6 4.7 TTGAAAGCGCTGCCAG
Bacillus pumilus SAFR-032 BPUM_2616 -30 4.7 TTGTAAACGTATGCAA
Bacillus subtilis subsp. subtilis str. 168 BSU29680 -101 4.5 TATAAAGCGTTTTCAA
6 4.8 TTGAAAGCGTTACCAG
Oceanobacillus iheyensis HTE831 OB0022 -36 4.5 TTGTAATCGTTTGCAA
Paenibacillus sp. JDR-2 Pjdr2_3796 -56 5 TTGAAAGCGTATTCTT
Position: -64
Score: 5
Sequence: ATGACAACGCTTTCAT
Locus tag: BH3442
BH3442 -64 5 ATGACAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araF
Ortholog function: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
Bacillus clausii KSM-K16 ABC0409 -35 5.4 TTGAAAGCGTTATCAA
Bacillus halodurans C-125 BH3442 -64 5 ATGACAACGCTTTCAT
Bacillus licheniformis DSM 13 BLi00442 -128 4.8 ATGTAAGCGCTTCAAA
Geobacillus kaustophilus HTA426 GK1910 -129 4.4 TTGAAAACGCTTCAAC
Position: -19
Score: 4.6
Sequence: TTGAAAGGGGTTTCAT
Locus tag: BH3448
BH3448 -19 4.6 TTGAAAGGGGTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsB
Ortholog function: ABC-type sugar transport system, periplasmic component
Bacillus halodurans C-125 BH3448 -19 4.6 TTGAAAGGGGTTTCAT
Bacillus licheniformis DSM 13 BLi00439 -41 4.7 TTGTAAACGCTGTCTT
Paenibacillus sp. JDR-2 Pjdr2_0664 -35 4.7 ATGAAAGCGGTTTTTT
Position: -71
Score: 4.4
Sequence: TCGTAAGCGCTTACAG
Locus tag: BH3563
BH3563 -71 4.4 TCGTAAGCGCTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sigL
Ortholog function: DNA-directed RNA polymerase sigma subunit SigL
Anoxybacillus flavithermus WK1 Aflv_2521 211 4.9 ATGTAAGCGTTTTTAA
Bacillus amyloliquefaciens FZB42 RBAM_031510 567 4.5 TGGAAAGCGCTTACAC
Bacillus cereus ATCC 14579 BC5143 488 4.6 ATTGAAGCGCTTACAA
Bacillus clausii KSM-K16 ABC3025 544 4.1 TTGACATCGTTTTAAA
Bacillus halodurans C-125 BH3563 -71 4.4 TCGTAAGCGCTTACAG
Bacillus licheniformis DSM 13 BLi03678 250 4.4 TTAAAAGCGCTTTGAA
Bacillus pumilus SAFR-032 BPUM_3063 951 4.7 ATGAAACCGCTTACGA
Bacillus subtilis subsp. subtilis str. 168 BSU34200 564 4.6 TGGAAAACGCTTTCAG
Geobacillus kaustophilus HTA426 GK3061 96 4.7 TTGGAAGCGTTTTTAT
Position: 6
Score: 4.9
Sequence: AGGAAAACGCTTACAA
Locus tag: BH3680
BH3680 6 4.9 AGGAAAACGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3680
Ortholog function: Predicted beta-xyloside ABC transporter, substrate-binding component
Bacillus halodurans C-125 BH3680 6 4.9 AGGAAAACGCTTACAA
Oceanobacillus iheyensis HTE831 OB3123 9 4.7 AAGAAAGCGTTTACAG
Paenibacillus sp. JDR-2 Pjdr2_0728 -8 4.6 TTGTAAACGTGTTCAA
Position: -65
Score: 5
Sequence: ATGTAAGCGCTTAAAT
Locus tag: BH3801
BH3801 -65 5 ATGTAAGCGCTTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmgA
Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16)
Anoxybacillus flavithermus WK1 Aflv_2739 -16 4.7 TTGAAAGGGCTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_022450 -43 4.6 GTGTAAGCGTTATCTT
Bacillus halodurans C-125 BH3801 -65 5 ATGTAAGCGCTTAAAT
Bacillus pumilus SAFR-032 BPUM_3373 -32 4.9 ATGTAAGCGGTAACAA
Bacillus subtilis subsp. subtilis str. 168 BSU24170 -37 4.9 TTGTAAGCGCTGTCTA
Geobacillus kaustophilus HTA426 GK3397 -40 4.6 TTGTAATCGCTTTCTT
Position: -194
Score: 4.8
Sequence: TTGGAAACGCTTTAAA
Locus tag: BH3823
BH3823 -194 4.8 TTGGAAACGCTTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pta
Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8)
Bacillus amyloliquefaciens FZB42 RBAM_034850 -99 5 TTGAAAGCGCTATAAT
Bacillus clausii KSM-K16 ABC3910 -143 4.3 TTGAAAACCCTTTCCT
-124 4.5 ATGGAAGCGTAATCTA
Bacillus halodurans C-125 BH3823 -194 4.8 TTGGAAACGCTTTAAA
Bacillus licheniformis DSM 13 BLi03997 -104 4.3 GTGTAAACGTTATAAT
Bacillus pumilus SAFR-032 BPUM_3415 -100 4.9 TTGTAAGCGCTATAAT
Bacillus subtilis subsp. subtilis str. 168 BSU37660 -100 5 ATGAAAGCGCTATAAT
-38 4 AAGAAAGCGTTTTTGT
Position: -114
Score: 4.7
Sequence: TTTAAAGCGTTTCCAA
Locus tag: BH3824
BH3824 -114 4.7 TTTAAAGCGTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3824
Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17)
Bacillus halodurans C-125 BH3824 -114 4.7 TTTAAAGCGTTTCCAA
Position: -41
Score: 4.8
Sequence: ATGAAAGCGTTTATTA
Locus tag: BH3839
BH3839 -41 4.8 ATGAAAGCGTTTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citS
Ortholog function: Two-component sensor kinase
Bacillus amyloliquefaciens FZB42 RBAM_007780 1297 4.5 TTGATAACGCTTTCGA
Bacillus cereus ATCC 14579 BC0936 -187 4.9 ATGAAAGCGTGTTCAT
Bacillus clausii KSM-K16 ABC1011 -42 4.2 TTGAAACCGTTATACT
Bacillus halodurans C-125 BH3839 -41 4.8 ATGAAAGCGTTTATTA
Bacillus licheniformis DSM 13 BLi00225 1303 4.5 TTGATAACGCTTTCGA
Bacillus subtilis subsp. subtilis str. 168 BSU07580 1297 4.5 TTGATAACGCTTTCGA
Position: -81
Score: 4.9
Sequence: ATGAAAGCGATTTCTT
Position: 24
Score: 4.6
Sequence: ATGATAGCGCTTTCTG
Locus tag: BH3845
BH3845 -81 4.9 ATGAAAGCGATTTCTT
24 4.6 ATGATAGCGCTTTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3845
Ortholog function: Predicted beta-glucoside-regulated ABC transport system, sugar-binding protein
Bacillus halodurans C-125 BH3845 -81 4.9 ATGAAAGCGATTTCTT
24 4.6 ATGATAGCGCTTTCTG
Bacillus pumilus SAFR-032 BPUM_3238 -37 4.9 TTGATAACGCTTACAA
Geobacillus kaustophilus HTA426 GK3207 -41 4.6 TTGAAAGGGGTTTCAA
Position: -39
Score: 4.3
Sequence: ATGAGAGCGCTTTATT
Locus tag: BH3854
BH3854 -39 4.3 ATGAGAGCGCTTTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS family mannitol-permease II, BC component
Anoxybacillus flavithermus WK1 Aflv_1566 -58 4.5 CTGTAAGCGCTTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_004230 -96 4.6 TTGTAAGCGTTTTATG
Bacillus halodurans C-125 BH3854 -39 4.3 ATGAGAGCGCTTTATT
Bacillus licheniformis DSM 13 BLi00505 -94 4.4 CTGTAAGCGTTTTAAT
Bacillus pumilus SAFR-032 BPUM_0369 -106 4.1 GTGAAAGCGTTTTACG
Bacillus subtilis subsp. subtilis str. 168 BSU03981 -95 4 CTGTAAGCGTTTTAAC
Geobacillus kaustophilus HTA426 GK1948 -54 4.8 TTGTAAGCGTTTTAAG
Oceanobacillus iheyensis HTE831 OB2603 -75 4.4 TTGTAAGCGGATTCCT
Paenibacillus sp. JDR-2 Pjdr2_6226 -33 4.1 AAGAAAGCGATTTTAT
Position: -36
Score: 4.2
Sequence: GTGAAAGCGCTTATCA
Locus tag: BH3921
BH3921 -36 4.2 GTGAAAGCGCTTATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gmuB
Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_035870 -38 4.7 ATGAAAACGTTTTAAC
Bacillus clausii KSM-K16 ABC0481 -60 4.9 TTGTAAGCGGATTCAT
Bacillus halodurans C-125 BH3921 -36 4.2 GTGAAAGCGCTTATCA
Bacillus licheniformis DSM 13 BLi02564 -34 4.8 GTGAAAGCGCTTTTAA
Bacillus pumilus SAFR-032 BPUM_2121 -37 4.2 CTGGAAGCGCTTTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU05810 -33 5 ATGTAAGCGTTTTAAT
Geobacillus kaustophilus HTA426 GK1859 -50 4.8 TTGAAAACGATATCAT
Oceanobacillus iheyensis HTE831 OB2760 -62 4.8 TTGTAACCGTTTTCTT
Position: -113
Score: 4.5
Sequence: AATAAAGCGCTTTCAT
Locus tag: BH3926
BH3926 -113 4.5 AATAAAGCGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dagA
Ortholog function: Putative amino acid transporter
Bacillus halodurans C-125 BH3926 -113 4.5 AATAAAGCGCTTTCAT
Bacillus licheniformis DSM 13 BLi04274 -107 4.9 ATGTAAGCGATTACAT
-33 5.1 ATGAAAGCGTTATCTT
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