Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Alicyclobacillus acidocaldarius LAA1

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Alicyclobacillus acidocaldarius LAA1
Orthologous TF(s) AaLAA1DRAFT_2597
Regulated genes 8
Built upon 559 sites [see more]
Predicted regulatory interactions in Alicyclobacillus acidocaldarius LAA1
Locus tag Position Score Sequence
Position: -69
Score: 4.3
Sequence: ATGTAACCGCTATCGA
Locus tag: AaLAA1DRAFT_0345
AaLAA1DRAFT_0345 -69 4.3 ATGTAACCGCTATCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mmgD
Ortholog function: Citrate synthase (si) (EC 2.3.3.1)
Anoxybacillus flavithermus WK1 Aflv_0504 -107 4.6 ATGTAAGCATTTTCTT
Anoxybacillus flavithermus WK1 Aflv_0504 -107 4.6 ATGTAAGCATTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_026180 -114 4.6 ATGTAAGCATTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_022420 -43 4.6 GTGTAAGCGTTATCTT
Bacillus clausii KSM-K16 ABC1805 -63 4.9 ATGTAAGCGCTTTATT
Bacillus clausii KSM-K16 ABC2715 174 4.6 TTGGAATCGTTTTCAA
Bacillus licheniformis DSM 13 BLi03062 -115 4.6 ATGTAAGCATTTTCTT
Bacillus licheniformis DSM 13 BLi03062 -115 4.6 ATGTAAGCATTTTCTT
Bacillus pumilus SAFR-032 BPUM_2556 -111 4.6 ATGTAAGCATTTTCTT
-69 4.5 TGGATAGCGCTTTCAA
Bacillus pumilus SAFR-032 BPUM_2556 -111 4.6 ATGTAAGCATTTTCTT
-69 4.5 TGGATAGCGCTTTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU24140 -37 4.9 TTGTAAGCGCTGTCTA
Bacillus subtilis subsp. subtilis str. 168 BSU29140 -114 4.6 ATGTAAGCATTTTCTT
Oceanobacillus iheyensis HTE831 OB2269 -39 4.4 TTGACTGCGCTTTCAA
Position: -86
Score: 4.6
Sequence: TTGAAAGCCCTTGCAA
Locus tag: AaLAA1DRAFT_0767
AaLAA1DRAFT_0767 -86 4.6 TTGAAAGCCCTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Bacillus amyloliquefaciens FZB42 RBAM_017350 34 5.1 TTGAAAGCGCAAACAA
Bacillus clausii KSM-K16 ABC0572 -72 4.7 TTGACACCGCTTACAA
Bacillus halodurans C-125 BH2757 -33 4.7 TTGATAACGCTTACTT
Bacillus licheniformis DSM 13 BLi04048 -109 4.5 TTGAAAGCGATTAATT
Bacillus subtilis subsp. subtilis str. 168 BSU17600 34 4.7 TTGGAAGCGCAAACAA
Geobacillus kaustophilus HTA426 GK1875 -59 5 ATGAAAGCGTTATAAT
Position: -30
Score: 4.2
Sequence: GTGGAAACGTTACCAT
Locus tag: AaLAA1DRAFT_1936
AaLAA1DRAFT_1936 -30 4.2 GTGGAAACGTTACCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsD
Ortholog function: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Anoxybacillus flavithermus WK1 Aflv_2671 -34 4.5 ATGTAACCGGTTACAG
Bacillus amyloliquefaciens FZB42 RBAM_033100 -33 5 ATGTAAACGGTTACAT
Bacillus cereus ATCC 14579 BC0661 -35 4.4 CTGTAAACGGTTACAT
Bacillus clausii KSM-K16 ABC3547 -33 4.1 CTGTAACCGGTTACAT
Bacillus pumilus SAFR-032 BPUM_3265 -38 4.2 GTGTAAACGGTTACAC
Bacillus subtilis subsp. subtilis str. 168 BSU35930 -34 5 ATGTAAACGGTTACAT
Oceanobacillus iheyensis HTE831 OB2575 -68 4.8 ATCAAAACGCTTTCAT
-40 4.1 CTGAAACCGGTTCCAT
Position: -36
Score: 4
Sequence: CAGAAAGCGATTACAA
Locus tag: AaLAA1DRAFT_2069
AaLAA1DRAFT_2069 -36 4 CAGAAAGCGATTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS family mannitol-permease II, BC component
Anoxybacillus flavithermus WK1 Aflv_1566 -58 4.5 CTGTAAGCGCTTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_004230 -96 4.6 TTGTAAGCGTTTTATG
Bacillus halodurans C-125 BH3854 -39 4.3 ATGAGAGCGCTTTATT
Bacillus licheniformis DSM 13 BLi00505 -94 4.4 CTGTAAGCGTTTTAAT
Bacillus pumilus SAFR-032 BPUM_0369 -106 4.1 GTGAAAGCGTTTTACG
Bacillus subtilis subsp. subtilis str. 168 BSU03981 -95 4 CTGTAAGCGTTTTAAC
Geobacillus kaustophilus HTA426 GK1948 -54 4.8 TTGTAAGCGTTTTAAG
Oceanobacillus iheyensis HTE831 OB2603 -75 4.4 TTGTAAGCGGATTCCT
Paenibacillus sp. JDR-2 Pjdr2_6226 -33 4.1 AAGAAAGCGATTTTAT
© 2009-2020 RegPrecise