Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Bacillus subtilis subsp. subtilis str. NCIB 3610

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. NCIB 3610
Orthologous TF(s) BsubsN3_010100016132
Regulated genes 75
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. NCIB 3610
Locus tag Position Score Sequence
Position: -32
Score: 4.1
Sequence: TTGTAAACGAATACAC
Locus tag: BsubsN3_010100000790
BsubsN3_010100000790 -32 4.1 TTGTAAACGAATACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1 Aflv_0142 -34 4 GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42 RBAM_001800 -32 4.1 TTGTAAACGAATACAC
Bacillus cereus ATCC 14579 BC0168 -84 4.5 ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13 BLi00172 -31 4.5 TTGTAAACGAATACAA
Bacillus pumilus SAFR-032 BPUM_0145 -35 4.6 TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU01540 -32 4.1 TTGTAAACGAATACAC
Position: -159
Score: 4.9
Sequence: AAGAAAGCGCTATCAT
Locus tag: BsubsN3_010100001196
BsubsN3_010100001196 -159 4.9 AAGAAAGCGCTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: MFS family major facilitator transporter, glycerol-3-phosphate:cation symporter
Bacillus amyloliquefaciens FZB42 RBAM_002610 -200 4.3 CTTAAAGCGTTTACAT
-162 4.9 AAGAAAGCGCTATCAT
Bacillus pumilus SAFR-032 BPUM_0182 -104 4.9 AAGAAAGCGTTATCAA
Bacillus subtilis subsp. subtilis str. 168 BSU02140 -159 4.9 AAGAAAGCGCTATCAT
Position: -81
Score: 4.4
Sequence: ATGAAAGCGTTTAACG
Locus tag: BsubsN3_010100001351
BsubsN3_010100001351 -81 4.4 ATGAAAGCGTTTAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glsA1
Ortholog function: Glutaminase (EC 3.5.1.2)
Bacillus amyloliquefaciens FZB42 RBAM_002800 -62 5 TTGAAAACGTTTTCCA
Bacillus halodurans C-125 BH2717 -32 5.3 ATGTAAACGCTTTCAT
Bacillus licheniformis DSM 13 BLi00274 -208 4.9 TTGAAAACGCTTATAT
Bacillus pumilus SAFR-032 BPUM_0244 -216 5.2 ATGTAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU02430 -81 4.4 ATGAAAGCGTTTAACG
Position: -95
Score: 4
Sequence: CTGTAAGCGTTTTAAC
Locus tag: BsubsN3_010100002224
BsubsN3_010100002224 -95 4 CTGTAAGCGTTTTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS family mannitol-permease II, BC component
Anoxybacillus flavithermus WK1 Aflv_1566 -58 4.5 CTGTAAGCGCTTTAAT
Bacillus amyloliquefaciens FZB42 RBAM_004230 -96 4.6 TTGTAAGCGTTTTATG
Bacillus halodurans C-125 BH3854 -39 4.3 ATGAGAGCGCTTTATT
Bacillus licheniformis DSM 13 BLi00505 -94 4.4 CTGTAAGCGTTTTAAT
Bacillus pumilus SAFR-032 BPUM_0369 -106 4.1 GTGAAAGCGTTTTACG
Bacillus subtilis subsp. subtilis str. 168 BSU03981 -95 4 CTGTAAGCGTTTTAAC
Geobacillus kaustophilus HTA426 GK1948 -54 4.8 TTGTAAGCGTTTTAAG
Oceanobacillus iheyensis HTE831 OB2603 -75 4.4 TTGTAAGCGGATTCCT
Paenibacillus sp. JDR-2 Pjdr2_6226 -33 4.1 AAGAAAGCGATTTTAT
Position: -99
Score: 5
Sequence: TTGAAAGCGTTTTATA
Locus tag: BsubsN3_010100002344
BsubsN3_010100002344 -99 5 TTGAAAGCGTTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlR
Ortholog function: Mannitol operon activator, BglG family
Anoxybacillus flavithermus WK1 Aflv_1564 -65 4.4 TTGAAAGCGGATGAAT
Bacillus amyloliquefaciens FZB42 RBAM_004390 -96 5 TTGAAAGCGTTTTATA
Bacillus halodurans C-125 BH3853 -39 4.3 ATGAGAGCGCTTTATT
Bacillus licheniformis DSM 13 BLi00508 -96 4.2 TTGACAGCGTTTTATG
Bacillus pumilus SAFR-032 BPUM_0388 -60 5 TTGAAAGCGTTTTATA
Bacillus subtilis subsp. subtilis str. 168 BSU04160 -99 5 TTGAAAGCGTTTTATA
Oceanobacillus iheyensis HTE831 OB2602 -75 4.4 TTGTAAGCGGATTCCT
Paenibacillus sp. JDR-2 Pjdr2_6225 -33 4.1 AAGAAAGCGATTTTAT
Position: -64
Score: 5.3
Sequence: ATGAAAACGCTATCAT
Locus tag: BsubsN3_010100002504
BsubsN3_010100002504 -64 5.3 ATGAAAACGCTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dctA
Ortholog function: C4-dicarboxylate transport protein
Bacillus amyloliquefaciens FZB42 RBAM_004800 -54 5.3 TTGAAAACGCTATCAT
Bacillus pumilus SAFR-032 BPUM_0419 -72 4.8 TTGAAATCGCTATCAT
Bacillus subtilis subsp. subtilis str. 168 BSU04470 -64 5.3 ATGAAAACGCTATCAT
Position: -33
Score: 5
Sequence: ATGTAAGCGTTTTAAT
Locus tag: BsubsN3_010100003229
BsubsN3_010100003229 -33 5 ATGTAAGCGTTTTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gmuB
Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_035870 -38 4.7 ATGAAAACGTTTTAAC
Bacillus clausii KSM-K16 ABC0481 -60 4.9 TTGTAAGCGGATTCAT
Bacillus halodurans C-125 BH3921 -36 4.2 GTGAAAGCGCTTATCA
Bacillus licheniformis DSM 13 BLi02564 -34 4.8 GTGAAAGCGCTTTTAA
Bacillus pumilus SAFR-032 BPUM_2121 -37 4.2 CTGGAAGCGCTTTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU05810 -33 5 ATGTAAGCGTTTTAAT
Geobacillus kaustophilus HTA426 GK1859 -50 4.8 TTGAAAACGATATCAT
Oceanobacillus iheyensis HTE831 OB2760 -62 4.8 TTGTAACCGTTTTCTT
Position: -205
Score: 4.4
Sequence: AATAAAACGCTTTCAA
Locus tag: BsubsN3_010100003724
BsubsN3_010100003724 -205 4.4 AATAAAACGCTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gatC
Ortholog function: Aspartyl (EC 6.3.5.6)/Glutamyl (EC 6.3.5.7) -tRNA amidotransferase subunit C
Bacillus amyloliquefaciens FZB42 RBAM_007070 -196 5 ATGAAAACGCTACCAA
Bacillus licheniformis DSM 13 BLi00730 -200 5.5 ATGAAAGCGTTTACAA
Bacillus pumilus SAFR-032 BPUM_0644 -215 5 ATGTAAGCGCTACCAA
Bacillus subtilis subsp. subtilis str. 168 BSU06670 -205 4.4 AATAAAACGCTTTCAA
Position: -32
Score: 4.8
Sequence: ATGTAAGCACTTACAT
Locus tag: BsubsN3_010100003879
BsubsN3_010100003879 -32 4.8 ATGTAAGCACTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhiL
Ortholog function: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Bacillus licheniformis DSM 13 BLi01368 -37 4.5 GAGTAAGCGTTTACAA
-30 4.8 ATGTAAGCACTTACAA
Bacillus subtilis subsp. subtilis str. 168 BSU06970 -32 4.8 ATGTAAGCACTTACAT
-20 4.6 AAGTAAGCGCTTACAG
Paenibacillus sp. JDR-2 Pjdr2_3535 -41 4.6 ATGTAAACACTTACAT
Position: -68
Score: 4.9
Sequence: ATGTAAGCGCTTTATA
Locus tag: BsubsN3_010100003944
BsubsN3_010100003944 -68 4.9 ATGTAAGCGCTTTATA
Supported by regulated orthologs from reference regulons