Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PurR regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: PurR - Bacillales
Regulator type: Transcription factor
Regulator family: PurR
Regulation mode: repressor
Biological process: Purine metabolism
Effector: 5-phosphoribosyl 1-pyrophosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC0075
Regulated genes 7
Built upon 102 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -258
Score: 8.7
Sequence: GAAGACGAATAATG-(16)-CATTGTTCGTTTTT
Locus tag: ABC0959
ABC0959 -258 8.7 GAAGACGAATAATG-(16)-CATTGTTCGTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pbuG
Ortholog function: Hypoxanthine/guanine permease PbuG
Bacillus halodurans C-125 BH0608 -294 9.3 TAAGACGAATATTA-(16)-TAATGTTCGTCTTT
Bacillus clausii KSM-K16 ABC0959 -258 8.7 GAAGACGAATAATG-(16)-CATTGTTCGTTTTT
Position: -305
Score: 9
Sequence: AAAAACGAACAATG-(16)-AAATGTTCGACTAT
Locus tag: ABC1024
ABC1024 -305 9 AAAAACGAACAATG-(16)-AAATGTTCGACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Bacillus subtilis subsp. subtilis str. 168 BSU06420 -323 9 AAACACGAACATTA-(16)-TATCGTTCGATAAT
Bacillus amyloliquefaciens FZB42 RBAM_006840 -314 9 AAACACGAACATTA-(16)-TATCGTTCGATAAT
Bacillus pumilus SAFR-032 BPUM_0596 -352 8.6 AAATCCGAACATTA-(16)-GATTGTTCGATAAA
Bacillus licheniformis DSM 13 BLi00693 -319 8.9 AAACCCGAACATTA-(16)-TATCGTTCGATAAT
Anoxybacillus flavithermus WK1 Aflv_0228 -295 7.1 AAAATCCGAACATT-(17)-AAATGTTCGATTTT
-294 9.7 AAATCCGAACATTA-(16)-AAATGTTCGATTTT
Geobacillus kaustophilus HTA426 GK0257 -302 9.6 AAACACGAACATTT-(16)-AAATGTTCGATTTT
Bacillus cereus ATCC 14579 BC0323 -295 9 AAACACGAACGTTA-(16)-AAACATTCGATTAT
Bacillus halodurans C-125 BH0623 -353 9.4 AAAAACGAACATTG-(16)-TATTGTTCGAGTTT
Bacillus clausii KSM-K16 ABC1024 -470 6.8 AATGCCGAAAACAA-(16)-TTTGGTTCGTTGTT
-305 9 AAAAACGAACAATG-(16)-AAATGTTCGACTAT
Oceanobacillus iheyensis HTE831 OB0739 -360 8.7 AAACCCGAACGTTA-(16)-AATCATACGAGTTT
-342 7.3 AAAACTTTACAAAA-(17)-GATTTTTCGTATTT
Paenibacillus sp. JDR-2 Pjdr2_0860 -411 9.6 AAAAACGAACTTTA-(17)-TAATGTTCGTATTT
Position: -65
Score: 7.2
Sequence: AAAGCCGAAAGATC-(16)-GGTCTTTCGGCTTT
Locus tag: ABC1443
ABC1443 -65 7.2 AAAGCCGAAAGATC-(16)-GGTCTTTCGGCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xpt
Ortholog function: Xanthine phosphoribosyltransferase (EC 2.4.2.22)
Bacillus subtilis subsp. subtilis str. 168 BSU22070 -279 8.6 AAATACGAATGATA-(16)-TAAAGTTCGGGAAT
Bacillus amyloliquefaciens FZB42 RBAM_020260 -287 8.5 AAACACGAATAATC-(16)-AAAAGTTCGGAAAT
Bacillus pumilus SAFR-032 BPUM_1944 -301 8.9 AAAAACGAACGTTT-(16)-TTAAGTTCGGTATT
Bacillus licheniformis DSM 13 BLi02348 -302 8 AAATACGAACGTTC-(16)-GCAGGTTCGTCTTT
Bacillus cereus ATCC 14579 BC1569 -305 8.6 AAACTCGAACAAAA-(16)-ATTTGTACGTGTTT
Bacillus halodurans C-125 BH1514 -301 9.1 AAACACGAATAAAT-(16)-ATTCATTCGTTTTT
Bacillus clausii KSM-K16 ABC1443 -65 7.2 AAAGCCGAAAGATC-(16)-GGTCTTTCGGCTTT
Position: -109
Score: 7.6
Sequence: AAATCCGAACATTA-(16)-GAATGTAAAGAATT
Locus tag: ABC2870
ABC2870 -109 7.6 AAATCCGAACATTA-(16)-GAATGTAAAGAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ABC2870
Ortholog function: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
Bacillus clausii KSM-K16 ABC2870 -109 7.6 AAATCCGAACATTA-(16)-GAATGTAAAGAATT
Oceanobacillus iheyensis HTE831 OB2789 -184 6.6 TAAAAAGAATGTAT-(17)-TAATATTACGAATT
-97 9.7 AAATACGAACAAAA-(16)-TAATGTTCGGTTTT
Position: -55
Score: 8.2
Sequence: ATGGGCGAATGATT-(17)-TAACATTCGTTTTT
Locus tag: ABC3216
ABC3216 -55 8.2 ATGGGCGAATGATT-(17)-TAACATTCGTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: guaC
Ortholog function: GMP reductase (EC 1.7.1.7)
Bacillus subtilis subsp. subtilis str. 168 BSU32130 -57 9.2 TAAGGCGAACATTT-(16)-AAATATTCGTTTTT
Bacillus amyloliquefaciens FZB42 RBAM_029180 -57 9.5 AAAGACGAACATTT-(16)-TATTATTCGCTTTT
Bacillus licheniformis DSM 13 BLi01200 -59 9.5 AAAGGCGAACATTT-(16)-AAATATTCGTTTTT
Bacillus cereus ATCC 14579 BC5452 -187 9.1 ATAAACGAACAATA-(16)-TTAAATTCGTTTTT
-55 8.8 ATGGACGAACATTT-(16)-AAATATTCGTATTT
Bacillus clausii KSM-K16 ABC3216 -73 7 GATCATGTATATTA-(17)-TTTTGTTCTTTTAT
-55 8.2 ATGGGCGAATGATT-(17)-TAACATTCGTTTTT
Oceanobacillus iheyensis HTE831 OB1310 -154 6.6 AAAAATAAATGAAA-(16)-AATTACTCAATTTT
-58 8.6 AAAGGCGAACGTTT-(17)-AATTATCCGTATTT
Position: -125
Score: 6.4
Sequence: GAAACTGAATAAAA-(16)-TATCTTCCGGAAAA
Locus tag: ABC3863
ABC3863 -125 6.4 GAAACTGAATAAAA-(16)-TATCTTCCGGAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glyA
Ortholog function: Serine hydroxymethyltransferase (EC 2.1.2.1)
Bacillus subtilis subsp. subtilis str. 168 BSU36900 -159 9.2 AATTCCGAACTTTA-(17)-TAATATTCGTTTTT
Bacillus amyloliquefaciens FZB42 RBAM_034060 -159 8.6 GAATGCGAATGATG-(17)-TAATGTTCGTGTTT
Bacillus pumilus SAFR-032 BPUM_3335 -157 8.1 AATATTGAATGATG-(17)-GAATATTCGGTTTT
Bacillus licheniformis DSM 13 BLi03935 -158 8.7 TATATCGAACTATA-(17)-TAATATTCGGTTTT
Anoxybacillus flavithermus WK1 Aflv_2713 -97 8.2 AAAGGCGAACAAAT-(17)-ATTTGTTCACTTTT
Geobacillus kaustophilus HTA426 GK3369 -120 8.7 AAATCCGAATGATT-(17)-TTTCATTCATTTTT
Bacillus cereus ATCC 14579 BC5316 -104 7.7 AAACATGAAGGTTC-(16)-GAATTTTCGTTTTT
Bacillus halodurans C-125 BH3765 -130 6.7 GAACATGAAAGTTT-(16)-AATTATGCGGAAAT
Bacillus clausii KSM-K16 ABC3863 -125 6.4 GAAACTGAATAAAA-(16)-TATCTTCCGGAAAA
Position: -111
Score: 8.1
Sequence: TTATACGAATGTTG-(16)-AAATGTTCGTGTCT
Locus tag: ABC4100
ABC4100 -111 8.1 TTATACGAATGTTG-(16)-AAATGTTCGTGTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purA
Ortholog function: Adenylosuccinate synthetase (EC 6.3.4.4)
Bacillus subtilis subsp. subtilis str. 168 BSU40420 -128 8.2 GGAAGCGAACGAAT-(17)-TAATGTTCGGATTT
Bacillus amyloliquefaciens FZB42 RBAM_037450 -132 8.6 TAAGGCGAACAAAC-(17)-AAATGTTCGGATTT
Bacillus pumilus SAFR-032 BPUM_3693 -128 9.3 TAAAACGAACAAAA-(16)-TAATGTTCGGCTTT
Bacillus licheniformis DSM 13 BLi04341 -130 9.5 AATAACGAACAAAA-(17)-TAATGTTCGGATTT
Anoxybacillus flavithermus WK1 Aflv_2841 -81 8.9 GTATACGAATAAAA-(17)-AAATGTTCGGTTTT
-68 6.9 AATAACAAACAAAC-(16)-TTTTATTGATTTTT
Geobacillus kaustophilus HTA426 GK3475 -113 9.4 ATAAACGAATAAAA-(17)-TAATGTTCGTGTTT
Bacillus cereus ATCC 14579 BC5468 -122 8 TCTTACGAACGAAA-(16)-AAATGTTCGCTTTT
Bacillus halodurans C-125 BH4028 -134 8.7 TGAACCGAACAAAT-(17)-AAATGTTCGGATTT
Bacillus clausii KSM-K16 ABC4100 -111 8.1 TTATACGAATGTTG-(16)-AAATGTTCGTGTCT
Oceanobacillus iheyensis HTE831 OB3453 -240 8.2 TCTTCCGTACATTA-(16)-AAATGTTCGTATTT
-62 6.7 TAATACGAATATAA-(17)-GTATATAATTAATT
Paenibacillus sp. JDR-2 Pjdr2_6258 -187 9.6 ATATCCGAACAATT-(16)-AATTGTTCGTTTTT
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