Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Bacillus thuringiensis str. Al Hakam

Reference regulog properties
Source regulog: CcpA - Bacillales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus thuringiensis str. Al Hakam
Orthologous TF(s) BALH_4255
Regulated genes 23
Built upon 559 sites [see more]
Predicted regulatory interactions in Bacillus thuringiensis str. Al Hakam
Locus tag Position Score Sequence
Position: -51
Score: 4.5
Sequence: ATGTAAACGCATTTAT
Locus tag: BALH_0144
BALH_0144 -51 4.5 ATGTAAACGCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mrp
Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Anoxybacillus flavithermus WK1 Aflv_0142 -34 4 GTGAAACCGAATACAT
Bacillus amyloliquefaciens FZB42 RBAM_001800 -32 4.1 TTGTAAACGAATACAC
Bacillus cereus ATCC 14579 BC0168 -84 4.5 ATGTAAACGCATTTAT
Bacillus licheniformis DSM 13 BLi00172 -31 4.5 TTGTAAACGAATACAA
Bacillus pumilus SAFR-032 BPUM_0145 -35 4.6 TTGTAAACGAATTCAA
Bacillus subtilis subsp. subtilis str. 168 BSU01540 -32 4.1 TTGTAAACGAATACAC
Position: -78
Score: 4.8
Sequence: ATAAAAGCGCTTGCAT
Locus tag: BALH_0158
BALH_0158 -78 4.8 ATAAAAGCGCTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntR
Ortholog function: Gluconate operon transcriptional repressor
Bacillus licheniformis DSM 13 BLi04286 -81 4.7 ATGAAAGTGTTTGCAT
Bacillus subtilis subsp. subtilis str. 168 BSU40050 -81 4.7 ATGAAAGTGTTTGCAT
Oceanobacillus iheyensis HTE831 OB3190 -79 4.3 ATTCAAGCGTTTACAA
Position: -34
Score: 5.1
Sequence: TTGAAAGCGTAATCAT
Locus tag: BALH_0501
BALH_0501 -34 5.1 TTGAAAGCGTAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citH
Ortholog function: Ca2+/citrate complex secondary transporter
Bacillus cereus ATCC 14579 BC0562 -36 5.1 TTGAAAGCGCAATCAT
Position: -39
Score: 4.9
Sequence: TTGTAAACGGTATCAA
Locus tag: BALH_0568
BALH_0568 -39 4.9 TTGTAAACGGTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69)
Bacillus amyloliquefaciens FZB42 RBAM_007970 318 4 GTGAAAACGCTTGCGG
Bacillus cereus ATCC 14579 BC0631 234 4.4 TTGATAACGCTTGCAG
Bacillus halodurans C-125 BH2216 136 4.4 TTGAAAGCCTTGACAT
318 4.4 GTGAAAACGCTTGCTG
Bacillus licheniformis DSM 13 BLi00796 318 4.6 GTGAAAACGCTTGCAG
Bacillus subtilis subsp. subtilis str. 168 BSU07800 318 4.6 GTGAAAACGCTTGCAG
Position: -186
Score: 4.9
Sequence: ATAAAAACGTTTACAT
Locus tag: BALH_0602
BALH_0602 -186 4.9 ATAAAAACGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: MFS family major facilitator transporter, glycerol-3-phosphate:cation symporter
Bacillus cereus ATCC 14579 BC0656 -184 4.9 ATAAAAACGTTTACAT
Bacillus licheniformis DSM 13 BLi04255 -203 4.8 TTGACAGCGCTTCCAT
Position: -14
Score: 4.4
Sequence: CTGTAAACGGTTACAT
Locus tag: BALH_0606
BALH_0606 -14 4.4 CTGTAAACGGTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsR
Ortholog function: Ribose operon repressor, LacI family
Bacillus cereus ATCC 14579 BC0659 -35 4.4 CTGTAAACGGTTACAT
Position: -187
Score: 4.9
Sequence: ATGAAAGCGTGTTCAT
Locus tag: BALH_0831
BALH_0831 -187 4.9 ATGAAAGCGTGTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: citS
Ortholog function: Two-component sensor kinase
Bacillus amyloliquefaciens FZB42 RBAM_007780 1297 4.5 TTGATAACGCTTTCGA
Bacillus cereus ATCC 14579 BC0936 -187 4.9 ATGAAAGCGTGTTCAT
Bacillus clausii KSM-K16 ABC1011 -42 4.2 TTGAAACCGTTATACT
Bacillus halodurans C-125 BH3839 -41 4.8 ATGAAAGCGTTTATTA
Bacillus licheniformis DSM 13 BLi00225 1303 4.5 TTGATAACGCTTTCGA
Bacillus subtilis subsp. subtilis str. 168 BSU07580 1297 4.5 TTGATAACGCTTTCGA
Position: -192
Score: 4.7
Sequence: TTGACACCGCTTTCAT
Position: -19
Score: 5.1
Sequence: TTGAAAGCGTTTAAAT
Locus tag: BALH_0917
BALH_0917 -192 4.7 TTGACACCGCTTTCAT
-19 5.1 TTGAAAGCGTTTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: Glycerol uptake facilitator protein
Bacillus cereus ATCC 14579 BC1034 -191 4.7 TTGACACCGCTTTCAT
Bacillus clausii KSM-K16 ABC3383 -198 4.2 ATGTATCCGTTTACAA
Bacillus licheniformis DSM 13 BLi00994 -207 4.5 TTGACAACGCTTTCAC
Bacillus pumilus SAFR-032 BPUM_0882 -191 4.9 TTGACAACGTTTTCAT
Bacillus subtilis subsp. subtilis str. 168 BSU09280 -182 4.7 TTGACACCGCTTTCAT
Geobacillus kaustophilus HTA426 GK1359 -206 5.1 TTGACAGCGTTTTCAA
Oceanobacillus iheyensis HTE831 OB2476 -164 4.7 TTGACAACGCTTTCAG
Position: -281
Score: 4.9
Sequence: ATGAAAGCGCTTATTA
Position: -22
Score: 4.3
Sequence: AAGAAAACATTTACAT
Locus tag: BALH_1113
BALH_1113 -281 4.9 ATGAAAGCGCTTATTA
-22 4.3 AAGAAAACATTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: odhA
Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Bacillus amyloliquefaciens FZB42 RBAM_019130 -101 4.7 TTGGAAGCGTTTTTAT
Bacillus cereus ATCC 14579 BC1252 -101 4.3 AAGAAAACATTTACAT
Bacillus clausii KSM-K16 ABC2114 -63 4.8 TTGTAAGCGCTTGAAA
Bacillus halodurans C-125 BH2206 -64 5 ATGAAAGCGTTATAAA
Bacillus licheniformis DSM 13 BLi02260 -100 4.3 GTGGAAGCGTTTTTAT
Bacillus pumilus SAFR-032 BPUM_1862 -101 4.7 TTGGAAGCGTTTTATT
Bacillus subtilis subsp. subtilis str. 168 BSU19370 -101 4.7 TTGGAAGCGTTTTTAT
Geobacillus kaustophilus HTA426 GK1023 -123 4.1 GTGAAAACGTTTATAC
Oceanobacillus iheyensis HTE831 OB1089 -51 4.3 TTTGAACCGTTTTCAT
Paenibacillus sp. JDR-2 Pjdr2_4724 -242 4.4 ATGAATACGCTTTAAA
Position: -122
Score: 4.7
Sequence: AAGTAAGCGTTTTCTT
Locus tag: BALH_1165
BALH_1165 -122 4.7 AAGTAAGCGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lutA
Ortholog function: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit
Anoxybacillus flavithermus WK1 Aflv_2009 -30 4.7 AAGAAAACGTTTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_031470 -181 4.7 ATGTAAGCGATTACTT
Bacillus cereus ATCC 14579 BC1303 -122 4.7 AAGTAAGCGTTTTCTT
Bacillus clausii KSM-K16 ABC0975 -69 4.8 TTGTAAGTGCTTACAT
Bacillus halodurans C-125 BH1832 -70 4.8 TTTAAAACGCTTACAT
Geobacillus kaustophilus HTA426 GK0395 -343 4.8 ATAAAAGCGTTTTCAG
Oceanobacillus iheyensis HTE831 OB0370 -36 4.1 ATGAAATCGCTTCATT
Position: -136
Score: 4.7
Sequence: TTGTAAGCGTTTTCTC
Locus tag: BALH_1170
BALH_1170 -136 4.7 TTGTAAGCGTTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywcJ
Ortholog function: Formate/nitrite family of transporters
Anoxybacillus flavithermus WK1 Aflv_1436 -131 4.5 TCGTAAACGTTTACAA
Bacillus cereus ATCC 14579 BC1308 -136 5.1 TTGTAAACGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU38060 -142 4.5 ATGATAGCGTTTTCGT
Position: -154
Score: 5
Sequence: TTGTAAACGTTAACAA
Locus tag: BALH_1251
BALH_1251 -154 5 TTGTAAACGTTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dat
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Anoxybacillus flavithermus WK1 Aflv_0590 -170 4.8 ATGTAAGCGGATACAT
Bacillus cereus ATCC 14579 BC1396 -153 5 TTGTAAACGTTAACAA
Bacillus licheniformis DSM 13 BLi02962 -225 5 ATGTAAGCGTATACAA
Bacillus pumilus SAFR-032 BPUM_2473 -200 4.6 GTGTAAGCGTATACAT
Geobacillus kaustophilus HTA426 GK2662 -165 5.1 ATGTAAGCGCATTCAA
Position: -80
Score: 5
Sequence: TTGAAAACGCTTTTAT
Locus tag: BALH_2482
BALH_2482 -80 5 TTGAAAACGCTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acoR
Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR
Bacillus amyloliquefaciens FZB42 RBAM_008340 -67 5 TTGAAAGCGCTTTATT
Bacillus cereus ATCC 14579 BC2766 -78 5 TTGAAAACGCTTTTAT
Bacillus halodurans C-125 BH1826 -117 4.7 TTGTTAGCGCTTTCTT
Bacillus licheniformis DSM 13 BLi00853 -51 5.1 TTGAAAGCGCTTTTAT
Bacillus pumilus SAFR-032 BPUM_0455 -59 5.1 TTGAAAGCGCTTTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU08100 -67 5 TTGAAAGCGCTTTATT
Position: -74
Score: 5.1
Sequence: ATGAAAACGCTGTCAT
Locus tag: BALH_3605
BALH_3605 -74 5.1 ATGAAAACGCTGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK1048
Ortholog function: CBS domain containing protein
Bacillus cereus ATCC 14579 BC3983 -73 5.1 ATGAAAACGCTGTCAT
Position: 0
Score: 4.8
Sequence: ATGCAAACGTTTTCAA
Locus tag: BALH_3633
BALH_3633 0 4.8 ATGCAAACGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycB
Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein
Bacillus clausii KSM-K16 ABC3520 -37 4.6 AAGAAAGCGGTTACTT
Bacillus halodurans C-125 BH2019 -55 4.4 TATAAAACGCTTTCAT
Bacillus pumilus SAFR-032 BPUM_3613 -51 4.8 AAGAAAGCGTTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU34160 -39 5 TTTAAAGCGCTTTCAT
Position: -233
Score: 4.5
Sequence: AAGAAAGCGTAAACAT
Locus tag: BALH_3705
BALH_3705 -233 4.5 AAGAAAGCGTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: drm
Ortholog function: Phosphopentomutase (EC 5.4.2.7)
Anoxybacillus flavithermus WK1 Aflv_0998 -114 4.9 ATGAAAACGTTTTATA
Bacillus amyloliquefaciens FZB42 RBAM_021610 -74 4.5 ATGTAAACGGTTTATA
Bacillus cereus ATCC 14579 BC4087 -222 4.5 AAGAAAGCGTAAACAT
Bacillus licheniformis DSM 13 BLi02500 -99 4.1 GTGTAAACGGTTTATA
Bacillus pumilus SAFR-032 BPUM_2081 -82 4.5 TTGTAAACGGTTTATA
Bacillus subtilis subsp. subtilis str. 168 BSU23500 -77 4.7 ATGAAAACGGTTTATA
Position: -37
Score: 4.3
Sequence: ATGTGAACGTTTTCTT
Locus tag: BALH_3858
BALH_3858 -37 4.3 ATGTGAACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqgQ
Ortholog function: Hypothetical Cytosolic Protein
Anoxybacillus flavithermus WK1 Aflv_0894 -23 4.5 TTGAAAACGCTTATAC
Bacillus cereus ATCC 14579 BC4261 -57 4.3 ATGTGAACGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2216 -49 4.2 CTGAAAGCGCATTTAT
Bacillus subtilis subsp. subtilis str. 168 BSU24860 -79 4.7 TTGTCAGCGTTTTCTT
Position: -178
Score: 4.3
Sequence: ATGTATACGTTTTCTT
Locus tag: BALH_4102
BALH_4102 -178 4.3 ATGTATACGTTTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b558 subunit
Bacillus amyloliquefaciens FZB42 RBAM_025520 -143 4.3 ATGTACACGTTTTCTT
Bacillus cereus ATCC 14579 BC4518 -178 4.3 ATGTATACGTTTTCTT
Bacillus clausii KSM-K16 ABC2664 -190 4.3 TTGAATCCGTTTTCTT
Bacillus licheniformis DSM 13 BLi02994 -143 4.4 ATGTACGCGTTTTCTT
Bacillus pumilus SAFR-032 BPUM_2503 -139 4.2 ATGTACGCGGTTTCTT
Bacillus subtilis subsp. subtilis str. 168 BSU28450 -139 4.4 ATGTACGCGTTTTCTT
Position: -184
Score: 4.5
Sequence: AAAAAAGCGTTTACAT
Locus tag: BALH_4833
BALH_4833 -184 4.5 AAAAAAGCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iolJ
Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Bacillus cereus ATCC 14579 BC5335 -184 4.5 AAAAAAGCGTTTACAT
Paenibacillus sp. JDR-2 Pjdr2_6054 -236 4.5 ATTATAGCGCTTACAA
Position: 13
Score: 5.1
Sequence: ATGTAAACGCTTACTA
Locus tag: BALH_4945
BALH_4945 13 5.1 ATGTAAACGCTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lrgA
Ortholog function: Antiholin-like protein LrgA
Bacillus cereus ATCC 14579 BC5439 -59 5 ATGTAAACGCTTACTT
Bacillus licheniformis DSM 13 BLi03037 -68 4.8 TTGAAAACGCTTTTTT
Bacillus pumilus SAFR-032 BPUM_2534 -68 4.5 TTGTAAACGCTTCATT
Bacillus subtilis subsp. subtilis str. 168 BSU28910 -68 4.9 TTGTAAGCGCTTTATA