Propagation of CcpA regulog to Bacillus amyloliquefaciens FZB42
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus amyloliquefaciens FZB42 |
| Orthologous TF(s) | RBAM_026860 |
| Regulated genes | 71 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -32
Score: 4.1 Sequence: TTGTAAACGAATACAC
Locus tag: RBAM_001800
|
||||
| RBAM_001800 | -32 | 4.1 | TTGTAAACGAATACAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mrp | ||||
| Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0142 | -34 | 4 | GTGAAACCGAATACAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_001800 | -32 | 4.1 | TTGTAAACGAATACAC |
| Bacillus cereus ATCC 14579 | BC0168 | -84 | 4.5 | ATGTAAACGCATTTAT |
| Bacillus licheniformis DSM 13 | BLi00172 | -31 | 4.5 | TTGTAAACGAATACAA |
| Bacillus pumilus SAFR-032 | BPUM_0145 | -35 | 4.6 | TTGTAAACGAATTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU01540 | -32 | 4.1 | TTGTAAACGAATACAC |
|
Position: -162
Score: 4.9 Sequence: AAGAAAGCGCTATCAT
Locus tag: RBAM_002610
|
||||
| RBAM_002610 | -162 | 4.9 | AAGAAAGCGCTATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpT | ||||
| Ortholog function: MFS family major facilitator transporter, glycerol-3-phosphate:cation symporter | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002610 | -200 | 4.3 | CTTAAAGCGTTTACAT |
| -162 | 4.9 | AAGAAAGCGCTATCAT | ||
| Bacillus pumilus SAFR-032 | BPUM_0182 | -104 | 4.9 | AAGAAAGCGTTATCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU02140 | -159 | 4.9 | AAGAAAGCGCTATCAT |
|
Position: -62
Score: 5 Sequence: TTGAAAACGTTTTCCA
Locus tag: RBAM_002800
|
||||
| RBAM_002800 | -62 | 5 | TTGAAAACGTTTTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glsA1 | ||||
| Ortholog function: Glutaminase (EC 3.5.1.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_002800 | -62 | 5 | TTGAAAACGTTTTCCA |
| Bacillus halodurans C-125 | BH2717 | -32 | 5.3 | ATGTAAACGCTTTCAT |
| Bacillus licheniformis DSM 13 | BLi00274 | -208 | 4.9 | TTGAAAACGCTTATAT |
| Bacillus pumilus SAFR-032 | BPUM_0244 | -216 | 5.2 | ATGTAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU02430 | -81 | 4.4 | ATGAAAGCGTTTAACG |
|
Position: -118
Score: 4.9 Sequence: ATGTAAGCGTTAACAG
Locus tag: RBAM_003280
|
||||
| RBAM_003280 | -118 | 4.9 | ATGTAAGCGTTAACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: amyE | ||||
| Ortholog function: Alpha-amylase precursor | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_003280 | -118 | 4.9 | ATGTAAGCGTTAACAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU03040 | -125 | 5.1 | ATGTAAGCGTTAACAA |
|
Position: -96
Score: 4.6 Sequence: TTGTAAGCGTTTTATG
Locus tag: RBAM_004230
|
||||
| RBAM_004230 | -96 | 4.6 | TTGTAAGCGTTTTATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS family mannitol-permease II, BC component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1566 | -58 | 4.5 | CTGTAAGCGCTTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_004230 | -96 | 4.6 | TTGTAAGCGTTTTATG |
| Bacillus halodurans C-125 | BH3854 | -39 | 4.3 | ATGAGAGCGCTTTATT |
| Bacillus licheniformis DSM 13 | BLi00505 | -94 | 4.4 | CTGTAAGCGTTTTAAT |
| Bacillus pumilus SAFR-032 | BPUM_0369 | -106 | 4.1 | GTGAAAGCGTTTTACG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU03981 | -95 | 4 | CTGTAAGCGTTTTAAC |
| Geobacillus kaustophilus HTA426 | GK1948 | -54 | 4.8 | TTGTAAGCGTTTTAAG |
| Oceanobacillus iheyensis HTE831 | OB2603 | -75 | 4.4 | TTGTAAGCGGATTCCT |
| Paenibacillus sp. JDR-2 | Pjdr2_6226 | -33 | 4.1 | AAGAAAGCGATTTTAT |
|
Position: -96
Score: 5 Sequence: TTGAAAGCGTTTTATA
Locus tag: RBAM_004390
|
||||
| RBAM_004390 | -96 | 5 | TTGAAAGCGTTTTATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlR | ||||
| Ortholog function: Mannitol operon activator, BglG family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1564 | -65 | 4.4 | TTGAAAGCGGATGAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_004390 | -96 | 5 | TTGAAAGCGTTTTATA |
| Bacillus halodurans C-125 | BH3853 | -39 | 4.3 | ATGAGAGCGCTTTATT |
| Bacillus licheniformis DSM 13 | BLi00508 | -96 | 4.2 | TTGACAGCGTTTTATG |
| Bacillus pumilus SAFR-032 | BPUM_0388 | -60 | 5 | TTGAAAGCGTTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU04160 | -99 | 5 | TTGAAAGCGTTTTATA |
| Oceanobacillus iheyensis HTE831 | OB2602 | -75 | 4.4 | TTGTAAGCGGATTCCT |
| Paenibacillus sp. JDR-2 | Pjdr2_6225 | -33 | 4.1 | AAGAAAGCGATTTTAT |
|
Position: -54
Score: 5.3 Sequence: TTGAAAACGCTATCAT
Locus tag: RBAM_004800
|
||||
| RBAM_004800 | -54 | 5.3 | TTGAAAACGCTATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dctA | ||||
| Ortholog function: C4-dicarboxylate transport protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_004800 | -54 | 5.3 | TTGAAAACGCTATCAT |
| Bacillus pumilus SAFR-032 | BPUM_0419 | -72 | 4.8 | TTGAAATCGCTATCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU04470 | -64 | 5.3 | ATGAAAACGCTATCAT |
|
Position: -196
Score: 5 Sequence: ATGAAAACGCTACCAA
Locus tag: RBAM_007070
|
||||
| RBAM_007070 | -196 | 5 | ATGAAAACGCTACCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gatC | ||||
| Ortholog function: Aspartyl (EC 6.3.5.6)/Glutamyl (EC 6.3.5.7) -tRNA amidotransferase subunit C | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007070 | -196 | 5 | ATGAAAACGCTACCAA |
| Bacillus licheniformis DSM 13 | BLi00730 | -200 | 5.5 | ATGAAAGCGTTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_0644 | -215 | 5 | ATGTAAGCGCTACCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU06670 | -205 | 4.4 | AATAAAACGCTTTCAA |
|
Position: -33
Score: 5.1 Sequence: ATGTAAGCGTATTCAT
Locus tag: RBAM_007810
|
||||
| RBAM_007810 | -33 | 5.1 | ATGTAAGCGTATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citM | ||||
| Ortholog function: Mg(2+) Citrate transporter (TC 2.A.11.1.1) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007810 | -33 | 5.1 | ATGTAAGCGTATTCAT |
| Bacillus licheniformis DSM 13 | BLi00221 | -33 | 4.9 | ATGTAAGCGGATTCAT |
| Bacillus pumilus SAFR-032 | BPUM_0710 | -33 | 5.2 | ATGAAAGCGTATACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07610 | -32 | 4.9 | ATGTAAGCGGATTCAT |
|
Position: -115
Score: 5.1 Sequence: ATGAAAGCGCTATAAA
Position: -26
Score: 4.4 Sequence: ATGAAAACGGTTACGG
Locus tag: RBAM_007970
|
||||
| RBAM_007970 | -115 | 5.1 | ATGAAAGCGCTATAAA | |
| -26 | 4.4 | ATGAAAACGGTTACGG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007970 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus cereus ATCC 14579 | BC0631 | 234 | 4.4 | TTGATAACGCTTGCAG |
| Bacillus halodurans C-125 | BH2216 | 136 | 4.4 | TTGAAAGCCTTGACAT |
| 318 | 4.4 | GTGAAAACGCTTGCTG | ||
| Bacillus licheniformis DSM 13 | BLi00796 | 318 | 4.6 | GTGAAAACGCTTGCAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07800 | 318 | 4.6 | GTGAAAACGCTTGCAG |
|
Position: -67
Score: 5 Sequence: TTGAAAGCGCTTTATT
Locus tag: RBAM_008340
|
||||
| RBAM_008340 | -67 | 5 | TTGAAAGCGCTTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoR | ||||
| Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008340 | -67 | 5 | TTGAAAGCGCTTTATT |
| Bacillus cereus ATCC 14579 | BC2766 | -78 | 5 | TTGAAAACGCTTTTAT |
| Bacillus halodurans C-125 | BH1826 | -117 | 4.7 | TTGTTAGCGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi00853 | -51 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_0455 | -59 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08100 | -67 | 5 | TTGAAAGCGCTTTATT |
|
Position: -29
Score: 4.8 Sequence: ATGTAAACGTTATCAG
Locus tag: RBAM_008360
|
||||
| RBAM_008360 | -29 | 4.8 | ATGTAAACGTTATCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glvA | ||||
| Ortholog function: Maltose-6'-phosphate glucosidase (EC 3.2.1.122) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008360 | -29 | 4.8 | ATGTAAACGTTATCAG |
| Bacillus clausii KSM-K16 | ABC3581 | -54 | 4.8 | TTGAAAGCGCTGCCTT |
| Bacillus licheniformis DSM 13 | BLi00855 | -29 | 4.8 | TTGTAAACGCTTATAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08180 | -28 | 5.1 | TTGTAAACGTTATCAA |
|
Position: -29
Score: 4.9 Sequence: ATGTAAGCGGATTCAA
Locus tag: RBAM_010120
|
||||
| RBAM_010120 | -29 | 4.9 | ATGTAAGCGGATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhaR | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_010120 | -29 | 4.9 | ATGTAAGCGGATTCAA |
| Bacillus licheniformis DSM 13 | BLi01062 | -27 | 4.5 | TTGTAAACGTATTCAC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU09880 | -29 | 4.6 | AAGTAAGCGCATACAT |
|
Position: -38
Score: 4.5 Sequence: TTGTTAACGTTAACAT
Locus tag: RBAM_012380
|
||||
| RBAM_012380 | -38 | 4.5 | TTGTTAACGTTAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_012380 | -123 | 4.2 | ATGTTAACGGATACAA |
| -38 | 4.5 | TTGTTAACGTTAACAT | ||
| Bacillus licheniformis DSM 13 | BLi03516 | -75 | 4 | ATGTTAACGTTCACAT |
| -43 | 4.5 | TTGTTAACGTTAACAT | ||
| Bacillus pumilus SAFR-032 | BPUM_2987 | -73 | 4.8 | TTGTAAACGATTACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU12300 | -123 | 4.8 | ATGACAGCGTTAACAT |
| -45 | 4.5 | ATGTTAACGTTAACAT | ||
|
Position: -51
Score: 4.6 Sequence: TTGTAAGGGTTTACAT
Locus tag: RBAM_013160
|
||||
| RBAM_013160 | -51 | 4.6 | TTGTAAGGGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ykoM | ||||
| Ortholog function: Putative transcriptional regulator, MarR family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_013160 | -51 | 4.6 | TTGTAAGGGTTTACAT |
| Bacillus licheniformis DSM 13 | BLi01493 | -59 | 4.7 | TTGTAAGGGTTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_1233 | -104 | 4.9 | TTGAAAGGGTTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU13340 | -51 | 4.7 | ATGTAAGGGTTTTCAT |
|
Position: -99
Score: 4.6 Sequence: AAGAAAACGCATACAT
Locus tag: RBAM_013910
|
||||
| RBAM_013910 | -99 | 4.6 | AAGAAAACGCATACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ccpC | ||||
| Ortholog function: Transcriptional regulators, LysR family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_013910 | -99 | 4.6 | AAGAAAACGCATACAT |
| Bacillus cereus ATCC 14579 | BC3982 | -73 | 5.1 | ATGAAAACGCTGTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU14140 | -108 | 4.7 | AAGAAAGCGCATACAT |
|
Position: -60
Score: 4.5 Sequence: AAAAAAGCGTTTACAA
Position: -28
Score: 4.5 Sequence: ATGAATACGTTTCCAA
Locus tag: RBAM_014120
|
||||
| RBAM_014120 | -60 | 4.5 | AAAAAAGCGTTTACAA | |
| -28 | 4.5 | ATGAATACGTTTCCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruR | ||||
| Ortholog function: Transcriptional regulator of fructose utilization, DeoR family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1478 | -24 | 4.6 | ATGTAAGCGATTTAAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_014120 | -28 | 4.5 | ATGAATACGTTTCCAA |
| Bacillus cereus ATCC 14579 | BC3720 | -46 | 4.3 | TTGTGACCGTTTTCAT |
| Bacillus licheniformis DSM 13 | BLi01652 | -29 | 4.6 | ATGAAGGCGTTTCCAA |
| Bacillus pumilus SAFR-032 | BPUM_1334 | -30 | 4.7 | ATGAATACGTTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU14380 | -29 | 4.7 | ATGAATACGTTTTCAT |
| Oceanobacillus iheyensis HTE831 | OB0840 | -113 | 5 | TTGAAAGCGTTTTATT |
|
Position: -95
Score: 4.3 Sequence: ATGAAAGCGTTACACT
Locus tag: RBAM_014810
|
||||
| RBAM_014810 | -95 | 4.3 | ATGAAAGCGTTACACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ylbB | ||||
| Ortholog function: CBS domain protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_014810 | -95 | 4.3 | ATGAAAGCGTTACACT |
| Bacillus licheniformis DSM 13 | BLi01712 | -142 | 4.5 | ATGAAAGCGTTAAACT |
| Bacillus pumilus SAFR-032 | BPUM_1387 | -116 | 4.5 | ATGAAAGCGTTAAACT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU14950 | -97 | 4.5 | ATGAAAGCGTTAAACT |
|
Position: -46
Score: 4.9 Sequence: ATTAAAGCGTTTACAA
Locus tag: RBAM_014960
|
||||
| RBAM_014960 | -46 | 4.9 | ATTAAAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ylbP | ||||
| Ortholog function: Uncharacterized N-acetyltransferase (EC 2.3.1.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_014960 | -46 | 4.9 | ATTAAAGCGTTTACAA |
| Bacillus clausii KSM-K16 | ABC2369 | -70 | 4.2 | TTTAATGCGTTTTCAT |
| Bacillus licheniformis DSM 13 | BLi01727 | -48 | 4.5 | AAAAAAGCGTTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_1403 | -58 | 4.8 | ATGAAAACGCCTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU15100 | -48 | 4.4 | AATAAAGCGTTTACAA |
| Oceanobacillus iheyensis HTE831 | OB1458 | -59 | 4.3 | TAGGAAGCGTTATCTT |
|
Position: -132
Score: 4.9 Sequence: TTGTAAACGCTTTAAT
Locus tag: RBAM_014970
|
||||
| RBAM_014970 | -132 | 4.9 | TTGTAAACGCTTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: apbA | ||||
| Ortholog function: 2-dehydropantoate 2-reductase (EC 1.1.1.169) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_014970 | -132 | 4.9 | TTGTAAACGCTTTAAT |
| Bacillus clausii KSM-K16 | ABC2368 | -98 | 4.8 | ATGAAAACGCATTAAA |
| Bacillus licheniformis DSM 13 | BLi01728 | -150 | 4.6 | TTGTAAACGCTTTTTT |
| Bacillus pumilus SAFR-032 | BPUM_1404 | -166 | 4.8 | TTGAAGGCGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU15110 | -127 | 4.7 | TTGTAAACGCTTTATT |
|
Position: -52
Score: 4.8 Sequence: ATGAAAGCGCAGTCTA
Locus tag: RBAM_015920
|
||||
| RBAM_015920 | -52 | 4.8 | ATGAAAGCGCAGTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sucC | ||||
| Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_015920 | -52 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus licheniformis DSM 13 | BLi01829 | -53 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1507 | -57 | 4.8 | ATGAAAGCGCAGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU16090 | -51 | 4.8 | ATGAAAGCGCAGTCTA |
| Geobacillus kaustophilus HTA426 | GK1208 | -47 | 4.2 | ATGAAAGCGCTAAGAC |
|
Position: -104
Score: 5.1 Sequence: TTGAAAGCGCTTTTAT
Locus tag: RBAM_017320
|
||||
| RBAM_017320 | -104 | 5.1 | TTGAAAGCGCTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xynP | ||||
| Ortholog function: Putative H+-xyloside symporter | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017320 | -104 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_1832 | -90 | 5.1 | TTGAAAGCGCTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17570 | -99 | 5.1 | TTGAAAGCGCTTTTAT |
|
Position: 34
Score: 5.1 Sequence: TTGAAAGCGCAAACAA
Locus tag: RBAM_017350
|
||||
| RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
| Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
| Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
| Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
|
Position: 0
Score: 4.3 Sequence: ATGAAAGCGGTTCTAG
Locus tag: RBAM_017960
|
||||
| RBAM_017960 | 0 | 4.3 | ATGAAAGCGGTTCTAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjmD | ||||
| Ortholog function: Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017960 | 0 | 4.3 | ATGAAAGCGGTTCTAG |
| Bacillus clausii KSM-K16 | ABC0630 | -52 | 4.3 | CTGTAAGCGGATTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU12330 | -123 | 4.8 | ATGACAGCGTTAACAT |
| -45 | 4.5 | ATGTTAACGTTAACAT | ||
|
Position: 0
Score: 4.3 Sequence: ATGAAAACCATTACAA
Locus tag: RBAM_018000
|
||||
| RBAM_018000 | 0 | 4.3 | ATGAAAACCATTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: endR | ||||
| Ortholog function: Probable HTH-type transcriptional regulator endR, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018000 | 0 | 4.3 | ATGAAAGCGGTTCTAG |
| Geobacillus kaustophilus HTA426 | GK1942 | -50 | 4.5 | ATGAAAACGCTTTTGA |
|
Position: -42
Score: 5.2 Sequence: TTGTAAGCGCTTACTA
Locus tag: RBAM_018230
|
||||
| RBAM_018230 | -42 | 5.2 | TTGTAAGCGCTTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yxjC | ||||
| Ortholog function: D-beta-hydroxybutyrate permease | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018230 | -42 | 5.2 | TTGTAAGCGCTTACTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39000 | -41 | 5.1 | TTGTAAACGCTTTCTA |
|
Position: -44
Score: 5.2 Sequence: ATGAAAACGTTTACTA
Locus tag: RBAM_018380
|
||||
| RBAM_018380 | -44 | 5.2 | ATGAAAACGTTTACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yngI | ||||
| Ortholog function: Long-chain fatty-acid-CoA ligase (EC 6.2.1.3) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_018380 | -44 | 5.2 | ATGAAAACGTTTACTA |
| Bacillus halodurans C-125 | BH1131 | -251 | 4.6 | AAGAAACCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi02144 | -35 | 5.3 | ATGAAAACGCTTTCTA |
| Bacillus pumilus SAFR-032 | BPUM_1785 | -35 | 4.8 | ATGTAAACGCTTACCA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU18250 | -41 | 4.8 | ATGTAAACGCTTTCCT |
| Geobacillus kaustophilus HTA426 | GK1598 | -103 | 4.9 | TTGAAAACGCTTCAAA |
| Oceanobacillus iheyensis HTE831 | OB2217 | -64 | 4.9 | TTGTAAGCGGTTACTT |
|
Position: -101
Score: 4.7 Sequence: TTGGAAGCGTTTTTAT
Locus tag: RBAM_019130
|
||||
| RBAM_019130 | -101 | 4.7 | TTGGAAGCGTTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: odhA | ||||
| Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_019130 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Bacillus cereus ATCC 14579 | BC1252 | -101 | 4.3 | AAGAAAACATTTACAT |
| Bacillus clausii KSM-K16 | ABC2114 | -63 | 4.8 | TTGTAAGCGCTTGAAA |
| Bacillus halodurans C-125 | BH2206 | -64 | 5 | ATGAAAGCGTTATAAA |
| Bacillus licheniformis DSM 13 | BLi02260 | -100 | 4.3 | GTGGAAGCGTTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_1862 | -101 | 4.7 | TTGGAAGCGTTTTATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU19370 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Geobacillus kaustophilus HTA426 | GK1023 | -123 | 4.1 | GTGAAAACGTTTATAC |
| Oceanobacillus iheyensis HTE831 | OB1089 | -51 | 4.3 | TTTGAACCGTTTTCAT |
| Paenibacillus sp. JDR-2 | Pjdr2_4724 | -242 | 4.4 | ATGAATACGCTTTAAA |
|
Position: -87
Score: 4.4 Sequence: TTAACAACGTTTACAT
Locus tag: RBAM_020070
|
||||
| RBAM_020070 | -87 | 4.4 | TTAACAACGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cspD | ||||
| Ortholog function: Cold-shock protein, molecular chaperone, RNA-helicase co-factor | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_020070 | -87 | 4.4 | TTAACAACGTTTACAT |
| Bacillus licheniformis DSM 13 | BLi02332 | -178 | 5 | TTGAAAACGATTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU21930 | -184 | 4.8 | ATAAAAGCGGTTACAT |
|
Position: -37
Score: 4.5 Sequence: TTGAAAGCCTATACAT
Locus tag: RBAM_020890
|
||||
| RBAM_020890 | -37 | 4.5 | TTGAAAGCCTATACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndk | ||||
| Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1096 | -104 | 4.3 | ATTAAATCGTTTTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_020890 | -37 | 4.5 | TTGAAAGCCTATACAT |
| Bacillus clausii KSM-K16 | ABC1890 | -70 | 4.4 | TTGTTAGCGTTTTCCT |
| Bacillus licheniformis DSM 13 | BLi02408 | -39 | 4.5 | TTGAAAGCCTATACAT |
| Bacillus pumilus SAFR-032 | BPUM_2004 | -43 | 4.3 | ATGTAAGCCTATACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU22730 | -38 | 4.1 | GTGAAAGCCTATACAT |
| Geobacillus kaustophilus HTA426 | GK2209 | -105 | 4.4 | TTATTAGCGCTTTCAA |
|
Position: -74
Score: 4.5 Sequence: ATGTAAACGGTTTATA
Locus tag: RBAM_021610
|
||||
| RBAM_021610 | -74 | 4.5 | ATGTAAACGGTTTATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drm | ||||
| Ortholog function: Phosphopentomutase (EC 5.4.2.7) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0998 | -114 | 4.9 | ATGAAAACGTTTTATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_021610 | -74 | 4.5 | ATGTAAACGGTTTATA |
| Bacillus cereus ATCC 14579 | BC4087 | -222 | 4.5 | AAGAAAGCGTAAACAT |
| Bacillus licheniformis DSM 13 | BLi02500 | -99 | 4.1 | GTGTAAACGGTTTATA |
| Bacillus pumilus SAFR-032 | BPUM_2081 | -82 | 4.5 | TTGTAAACGGTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU23500 | -77 | 4.7 | ATGAAAACGGTTTATA |
|
Position: -43
Score: 4.6 Sequence: GTGTAAGCGTTATCTT
Locus tag: RBAM_022450
|
||||
| RBAM_022450 | -43 | 4.6 | GTGTAAGCGTTATCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgA | ||||
| Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2739 | -16 | 4.7 | TTGAAAGGGCTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022450 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus halodurans C-125 | BH3801 | -65 | 5 | ATGTAAGCGCTTAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3373 | -32 | 4.9 | ATGTAAGCGGTAACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24170 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Geobacillus kaustophilus HTA426 | GK3397 | -40 | 4.6 | TTGTAATCGCTTTCTT |
|
Position: -73
Score: 4.8 Sequence: ATGAAAATGTTTACAT
Locus tag: RBAM_023110
|
||||
| RBAM_023110 | -73 | 4.8 | ATGAAAATGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgY | ||||
| Ortholog function: Uncharacterized short membrane protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023110 | -73 | 4.8 | ATGAAAATGTTTACAT |
| Bacillus clausii KSM-K16 | ABC2500 | -76 | 4.4 | AAGAAAGCATTTACAA |
| Bacillus licheniformis DSM 13 | BLi02652 | -71 | 4.8 | ATGAAAATGTTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_2208 | -76 | 4.6 | ATGTAAATGTTTACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24780 | -72 | 4.8 | ATGAAAATGTTTACAT |
| Oceanobacillus iheyensis HTE831 | OB1915 | -75 | 4.6 | ATAGAAACGTTTACAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3908 | -124 | 4.3 | ATCATAACGCTTTCAA |
|
Position: -109
Score: 4.4 Sequence: TTTTAACCGTTTTCAT
Locus tag: RBAM_023120
|
||||
| RBAM_023120 | -109 | 4.4 | TTTTAACCGTTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgX | ||||
| Ortholog function: Similar to Hydroxyacylglutathione hydrolase, but in an organism lacking glutathione biosynthesis | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023120 | -109 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus clausii KSM-K16 | ABC2499 | -98 | 4.3 | TTGTACCCGTTTTCAT |
| Bacillus halodurans C-125 | BH2820 | -112 | 4.5 | TTTTAAACGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02653 | -105 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_2209 | -103 | 4.4 | TTTTAACCGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24790 | -84 | 4.3 | TCGATAGCGTTTTCAT |
|
Position: -61
Score: 4.8 Sequence: ATGAAAACGGTTAAAA
Locus tag: RBAM_023130
|
||||
| RBAM_023130 | -61 | 4.8 | ATGAAAACGGTTAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgW | ||||
| Ortholog function: Alkaliphily related protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023130 | -61 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus clausii KSM-K16 | ABC2498 | -57 | 4.5 | ATGAAAACGGGTACAA |
| Bacillus halodurans C-125 | BH2819 | -168 | 4.5 | AAGAAAACGTTTAAAA |
| Bacillus licheniformis DSM 13 | BLi02654 | -66 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus pumilus SAFR-032 | BPUM_2210 | -40 | 4.8 | ATGAAAACGGTTAAAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24800 | -88 | 4.8 | ATGAAAACGCTATCGA |
|
Position: -190
Score: 5 Sequence: TTGTAAGCGTATACAA
Locus tag: RBAM_023500
|
||||
| RBAM_023500 | -190 | 5 | TTGTAAGCGTATACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cccA | ||||
| Ortholog function: Membrane-attached cytochrome c550 | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_023500 | -190 | 5 | TTGTAAGCGTATACAA |
| Bacillus pumilus SAFR-032 | BPUM_2252 | -330 | 4.8 | ATGAAAACGCTTTTTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU25190 | -188 | 5 | TTGTAAGCGTATACAA |
|
Position: -82
Score: 4.7 Sequence: ATGAAAACGGTTTCGT
Locus tag: RBAM_024210
|
||||
| RBAM_024210 | -82 | 4.7 | ATGAAAACGGTTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manR | ||||
| Ortholog function: Transcriptional regulator of mannose utilization, BglG family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_024210 | -82 | 4.7 | ATGAAAACGGTTTCGT |
| Bacillus licheniformis DSM 13 | BLi02111 | -89 | 4.5 | ATGTAAACGGTTACGT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU12000 | -79 | 4.8 | ATGTAAACGGTTTCTT |
|
Position: -143
Score: 4.3 Sequence: ATGTACACGTTTTCTT
Locus tag: RBAM_025520
|
||||
| RBAM_025520 | -143 | 4.3 | ATGTACACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b558 subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025520 | -143 | 4.3 | ATGTACACGTTTTCTT |
| Bacillus cereus ATCC 14579 | BC4518 | -178 | 4.3 | ATGTATACGTTTTCTT |
| Bacillus clausii KSM-K16 | ABC2664 | -190 | 4.3 | TTGAATCCGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02994 | -143 | 4.4 | ATGTACGCGTTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2503 | -139 | 4.2 | ATGTACGCGGTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28450 | -139 | 4.4 | ATGTACGCGTTTTCTT |
|
Position: -98
Score: 4.4 Sequence: TGTAAAGCGCTTACAA
Locus tag: RBAM_025570
|
||||
| RBAM_025570 | -98 | 4.4 | TGTAAAGCGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xsa | ||||
| Ortholog function: Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025570 | -98 | 4.4 | TGTAAAGCGCTTACAA |
| Bacillus clausii KSM-K16 | ABC3371 | -61 | 4.7 | TTGAAAGCGGTGCCAA |
| Bacillus clausii KSM-K16 | ABC3371 | -61 | 4.7 | TTGAAAGCGGTGCCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28510 | -100 | 5 | TTAAAAGCGCTTACAT |
|
Position: -37
Score: 4.5 Sequence: ATGAAAACGCTTTTCT
Locus tag: RBAM_025750
|
||||
| RBAM_025750 | -37 | 4.5 | ATGAAAACGCTTTTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glcD | ||||
| Ortholog function: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2029 | -94 | 4.7 | ATGTAAACGTTTTATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025750 | -37 | 4.5 | ATGAAAACGCTTTTCT |
| Bacillus licheniformis DSM 13 | BLi00330 | -96 | 4.3 | TTGAAAACGGGTTCTT |
| -49 | 4.7 | TTGAAAGCGTTTGATT | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28680 | -33 | 4.6 | TTGAAAGCGTTTTTTG |
|
Position: 0
Score: 4.4 Sequence: ATGAATGCGATTACAA
Locus tag: RBAM_025770
|
||||
| RBAM_025770 | 0 | 4.4 | ATGAATGCGATTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cstA | ||||
| Ortholog function: Carbon starvation-induced membrane protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025770 | 0 | 4.4 | ATGAATGCGATTACAA |
| Bacillus licheniformis DSM 13 | BLi03019 | -62 | 4.3 | ATGATTGCGCTTACAA |
| Bacillus pumilus SAFR-032 | BPUM_2525 | 0 | 4.6 | ATGAATGCGGTTACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28710 | 0 | 4.6 | ATGAATGCGGTTACAA |
|
Position: -32
Score: 4.4 Sequence: ATGCAAGCGCTTTATT
Locus tag: RBAM_025860
|
||||
| RBAM_025860 | -32 | 4.4 | ATGCAAGCGCTTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araA | ||||
| Ortholog function: L-arabinose isomerase (EC 5.3.1.4) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025860 | -32 | 4.4 | ATGCAAGCGCTTTATT |
| Bacillus clausii KSM-K16 | ABC0408 | -136 | 4.9 | TTGGAAGCGCTTTAAT |
| Bacillus licheniformis DSM 13 | BLi03028 | -65 | 5 | TTGTAAGCGTTTTAAT |
| Bacillus pumilus SAFR-032 | BPUM_2327 | -35 | 5 | TTGAAACCGCTATCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28800 | -38 | 5 | TTGAAAGCGTTTTATT |
| Oceanobacillus iheyensis HTE831 | OB2797 | -59 | 4.3 | AAGAAAGCGTATCCTT |
| -29 | 4.4 | ATGTAGGCGTTTTCAG | ||
|
Position: -33
Score: 5.3 Sequence: TTGAAAGCGCTTTAAA
Locus tag: RBAM_025870
|
||||
| RBAM_025870 | -33 | 5.3 | TTGAAAGCGCTTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: abnA | ||||
| Ortholog function: Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025870 | -33 | 5.3 | TTGAAAGCGCTTTAAA |
| Bacillus licheniformis DSM 13 | BLi03029 | -94 | 4.5 | AAGACAGCGCTTACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28810 | -38 | 5.2 | TTGTAAGCGCTTTCTA |
|
Position: -166
Score: 5.3 Sequence: ATGAAAGCGTTTTCTT
Locus tag: RBAM_026150
|
||||
| RBAM_026150 | -166 | 5.3 | ATGAAAGCGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: phoP | ||||
| Ortholog function: Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_026150 | -166 | 5.3 | ATGAAAGCGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi03059 | -69 | 4.3 | GTGAAAACGTTTATTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29110 | -161 | 5.4 | ATGAAAGCGCTATCAT |
|
Position: -114
Score: 4.6 Sequence: ATGTAAGCATTTTCTT
Locus tag: RBAM_026180
|
||||
| RBAM_026180 | -114 | 4.6 | ATGTAAGCATTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgD | ||||
| Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022420 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus clausii KSM-K16 | ABC1805 | -63 | 4.9 | ATGTAAGCGCTTTATT |
| Bacillus clausii KSM-K16 | ABC2715 | 174 | 4.6 | TTGGAATCGTTTTCAA |
| Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU24140 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Oceanobacillus iheyensis HTE831 | OB2269 | -39 | 4.4 | TTGACTGCGCTTTCAA |
|
Position: -146
Score: 4.7 Sequence: TTGTAAGCGGTACCAA
Locus tag: RBAM_026400
|
||||
| RBAM_026400 | -146 | 4.7 | TTGTAAGCGGTACCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0480 | -133 | 4.4 | AAGAAAACGTTTTCGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026400 | -146 | 4.7 | TTGTAAGCGGTACCAA |
| Bacillus licheniformis DSM 13 | BLi03086 | -168 | 4.9 | GTGAAAGCGTTAACAT |
| Bacillus pumilus SAFR-032 | BPUM_2579 | -180 | 4.7 | ATGTAAGCGGTAACAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29470 | -156 | 5.2 | TTGTAAGCGTTATCAA |
|
Position: -102
Score: 4.5 Sequence: TATAAAGCGTTTTCAA
Locus tag: RBAM_026800
|
||||
| RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acsA | ||||
| Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0462 | 237 | 4.9 | ATGAAAGAGTTTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA |
| Bacillus clausii KSM-K16 | ABC2760 | -65 | 4.7 | TTGAAAACGTTACCTT |
| 0 | 4.8 | ATGAAAGCGCTTCCTG | ||
| Bacillus halodurans C-125 | BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG |
| Bacillus licheniformis DSM 13 | BLi03119 | 6 | 4.7 | TTGAAAGCGCTGCCAG |
| Bacillus pumilus SAFR-032 | BPUM_2616 | -30 | 4.7 | TTGTAAACGTATGCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -101 | 4.5 | TATAAAGCGTTTTCAA |
| 6 | 4.8 | TTGAAAGCGTTACCAG | ||
| Oceanobacillus iheyensis HTE831 | OB0022 | -36 | 4.5 | TTGTAATCGTTTGCAA |
| Paenibacillus sp. JDR-2 | Pjdr2_3796 | -56 | 5 | TTGAAAGCGTATTCTT |
|
Position: -72
Score: 4.9 Sequence: TTGAAAACGCTTTATA
Locus tag: RBAM_026810
|
||||
| RBAM_026810 | -72 | 4.9 | TTGAAAACGCTTTATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuA | ||||
| Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0461 | -70 | 4.7 | ATGAAAACGATTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026810 | -72 | 4.9 | TTGAAAACGCTTTATA |
| Bacillus licheniformis DSM 13 | BLi03120 | -69 | 4.9 | ATGAAAACGCTTAATA |
| Bacillus pumilus SAFR-032 | BPUM_2617 | -74 | 4.4 | GTGAAACCGTTTTAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29690 | -75 | 4.9 | TTGAAAACGCTTTATA |
|
Position: -91
Score: 4.8 Sequence: TTGAAAACGCTTACTC
Locus tag: RBAM_027180
|
||||
| RBAM_027180 | -91 | 4.8 | TTGAAAACGCTTACTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmR | ||||
| Ortholog function: Transcriptional regulator of alpha-galactoside utilization, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_027180 | -91 | 4.8 | TTGAAAACGCTTACTC |
| Bacillus halodurans C-125 | BH2227 | -95 | 4.5 | TTGAAAACGCTTACCC |
| Bacillus licheniformis DSM 13 | BLi01139 | -75 | 4.2 | TTGAAAACTTTTACCT |
| Bacillus pumilus SAFR-032 | BPUM_1754 | -78 | 4.4 | TTGAAAGCGCTTTACC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU30260 | -86 | 4.8 | TTGTAACCGCTTACTT |
|
Position: -43
Score: 4.9 Sequence: TTGTAAGCGTTTTTAT
Locus tag: RBAM_031320
|
||||
| RBAM_031320 | -43 | 4.9 | TTGTAAGCGTTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araE | ||||
| Ortholog function: Arabinose-proton symporter | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_031320 | -43 | 4.9 | TTGTAAGCGTTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU33960 | -38 | 4.7 | ATGAAAACGCTTTACT |
|
Position: -229
Score: 4.9 Sequence: ATAAAAACGCTTACAA
Position: -59
Score: 4.6 Sequence: ATGAAAGGGCTTACTA
Locus tag: RBAM_031330
|
||||
| RBAM_031330 | -229 | 4.9 | ATAAAAACGCTTACAA | |
| -59 | 4.6 | ATGAAAGGGCTTACTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araR | ||||
| Ortholog function: Transcriptional repressor of arabinoside utilization operon, GntR family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_031330 | -229 | 4.9 | ATAAAAACGCTTACAA |
| -59 | 4.6 | ATGAAAGGGCTTACTA | ||
| Bacillus licheniformis DSM 13 | BLi02061 | -265 | 4 | CTGATAGCGATTTCAT |
| -239 | 4 | AAGAAAGCATTTTCCT | ||
| Bacillus pumilus SAFR-032 | BPUM_2330 | -254 | 4.9 | TTGATAGCGGTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU33970 | -115 | 4.4 | AGTAAAGCGTTTTCAT |
| Oceanobacillus iheyensis HTE831 | OB2800 | -289 | 4.1 | CTGAAAACGCCTACAT |
|
Position: -181
Score: 4.7 Sequence: ATGTAAGCGATTACTT
Locus tag: RBAM_031490
|
||||
| RBAM_031490 | -181 | 4.7 | ATGTAAGCGATTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lutR | ||||
| Ortholog function: Lactate-responsive regulator, GntR family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2010 | -87 | 4.6 | ATGTAAGCGCAACCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_031490 | -181 | 4.7 | ATGTAAGCGATTACTT |
| Bacillus halodurans C-125 | BH1835 | -70 | 4.8 | TTTAAAACGCTTACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34180 | -254 | 5 | ATGTAAGCGGTTTCTA |
| Geobacillus kaustophilus HTA426 | GK0396 | -343 | 4.8 | ATAAAAGCGTTTTCAG |
| Oceanobacillus iheyensis HTE831 | OB0369 | -36 | 4.1 | ATGAAATCGCTTCATT |
|
Position: -33
Score: 5 Sequence: ATGTAAACGGTTACAT
Locus tag: RBAM_033080
|
||||
| RBAM_033080 | -33 | 5 | ATGTAAACGGTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsR | ||||
| Ortholog function: Ribose operon repressor, LacI family | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_033080 | -33 | 5 | ATGTAAACGGTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_3263 | -38 | 4.2 | GTGTAAACGGTTACAC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU35910 | -34 | 5 | ATGTAAACGGTTACAT |
| Oceanobacillus iheyensis HTE831 | OB2577 | -68 | 4.8 | ATCAAAACGCTTTCAT |
| -40 | 4.1 | CTGAAACCGGTTCCAT | ||
|
Position: -99
Score: 5 Sequence: TTGAAAGCGCTATAAT
Locus tag: RBAM_034850
|
||||
| RBAM_034850 | -99 | 5 | TTGAAAGCGCTATAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pta | ||||
| Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034850 | -99 | 5 | TTGAAAGCGCTATAAT |
| Bacillus clausii KSM-K16 | ABC3910 | -143 | 4.3 | TTGAAAACCCTTTCCT |
| -124 | 4.5 | ATGGAAGCGTAATCTA | ||
| Bacillus halodurans C-125 | BH3823 | -194 | 4.8 | TTGGAAACGCTTTAAA |
| Bacillus licheniformis DSM 13 | BLi03997 | -104 | 4.3 | GTGTAAACGTTATAAT |
| Bacillus pumilus SAFR-032 | BPUM_3415 | -100 | 4.9 | TTGTAAGCGCTATAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37660 | -100 | 5 | ATGAAAGCGCTATAAT |
| -38 | 4 | AAGAAAGCGTTTTTGT | ||
|
Position: -178
Score: 4.5 Sequence: ATTATAGCGCTTTCAA
Locus tag: RBAM_034860
|
||||
| RBAM_034860 | -178 | 4.5 | ATTATAGCGCTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywfI | ||||
| Ortholog function: Predicted heme peroxidase involved in anaerobic stress response | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034860 | -178 | 4.5 | ATTATAGCGCTTTCAA |
| Bacillus halodurans C-125 | BH3825 | -114 | 4.7 | TTTAAAGCGTTTCCAA |
| Bacillus pumilus SAFR-032 | BPUM_3416 | -156 | 4.5 | ATTATAGCGCTTACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37670 | -200 | 4.5 | ATTATAGCGCTTTCAT |
|
Position: -175
Score: 4.7 Sequence: ACGAAAGCGCTATCAT
Position: -151
Score: 5 Sequence: ATGAAAGCGCATTAAA
Locus tag: RBAM_035290
|
||||
| RBAM_035290 | -175 | 4.7 | ACGAAAGCGCTATCAT | |
| -151 | 5 | ATGAAAGCGCATTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sacP | ||||
| Ortholog function: PTS sucrose-specific enzyme IIBC component | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2785 | -147 | 4.7 | ATGAAAGCGGATAAAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_035290 | -175 | 4.7 | ACGAAAGCGCTATCAT |
| -151 | 5 | ATGAAAGCGCATTAAA | ||
| Bacillus cereus ATCC 14579 | BC0775 | -158 | 4.7 | AAGAAAGCGTTGACAA |
| Bacillus halodurans C-125 | BH1856 | -170 | 4.3 | GAGAAAGCGTTGACAA |
| Bacillus licheniformis DSM 13 | BLi04017 | -154 | 4.9 | ATGAAAGCGTATTAAA |
| Bacillus pumilus SAFR-032 | BPUM_3452 | -145 | 5.1 | ATGAAAGCGTAATCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38050 | -151 | 5 | ATGAAAGCGTATTCTT |
|
Position: 15
Score: 4.3 Sequence: AAGAAAGCGTTTGCTG
Locus tag: RBAM_035460
|
||||
| RBAM_035460 | 15 | 4.3 | AAGAAAGCGTTTGCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galK | ||||
| Ortholog function: Galactokinase (EC 2.7.1.6) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_035460 | 15 | 4.3 | AAGAAAGCGTTTGCTG |
| Bacillus pumilus SAFR-032 | BPUM_3468 | 247 | 4.4 | TTGAAATCGCTTACGT |
|
Position: -80
Score: 5.1 Sequence: ATGTAAGCGTTTCCAA
Locus tag: RBAM_035650
|
||||
| RBAM_035650 | -80 | 5.1 | ATGTAAGCGTTTCCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: licC2 | ||||
| Ortholog function: PTS system, lichenan-specific IIC component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_035650 | -80 | 5.1 | ATGTAAGCGTTTCCAA |
| Bacillus licheniformis DSM 13 | BLi04088 | -74 | 5.2 | ATGAAAACGGTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3505 | -71 | 5.3 | ATGAAAGCGGTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38390 | -79 | 5.4 | TTGTAAGCGTTTTCAA |
|
Position: -75
Score: 5.1 Sequence: ATGAAAGCGATTTCAT
Locus tag: RBAM_035790
|
||||
| RBAM_035790 | -75 | 5.1 | ATGAAAGCGATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: licB | ||||
| Ortholog function: PTS system, lichenan-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_035790 | -75 | 5.1 | ATGAAAGCGATTTCAT |
| Bacillus licheniformis DSM 13 | BLi04089 | -74 | 5.2 | ATGAAAACGGTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3506 | -71 | 5.3 | ATGAAAGCGGTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38590 | -77 | 5.1 | ATGAAAGCGATTTCAT |
|
Position: -38
Score: 4.7 Sequence: ATGAAAACGTTTTAAC
Locus tag: RBAM_035870
|
||||
| RBAM_035870 | -38 | 4.7 | ATGAAAACGTTTTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gmuB | ||||
| Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_035870 | -38 | 4.7 | ATGAAAACGTTTTAAC |
| Bacillus clausii KSM-K16 | ABC0481 | -60 | 4.9 | TTGTAAGCGGATTCAT |
| Bacillus halodurans C-125 | BH3921 | -36 | 4.2 | GTGAAAGCGCTTATCA |
| Bacillus licheniformis DSM 13 | BLi02564 | -34 | 4.8 | GTGAAAGCGCTTTTAA |
| Bacillus pumilus SAFR-032 | BPUM_2121 | -37 | 4.2 | CTGGAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU05810 | -33 | 5 | ATGTAAGCGTTTTAAT |
| Geobacillus kaustophilus HTA426 | GK1859 | -50 | 4.8 | TTGAAAACGATATCAT |
| Oceanobacillus iheyensis HTE831 | OB2760 | -62 | 4.8 | TTGTAACCGTTTTCTT |
|
Position: 21
Score: 4.3 Sequence: TTGCAAACGGATTCAA
Locus tag: RBAM_036020
|
||||
| RBAM_036020 | 21 | 4.3 | TTGCAAACGGATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cimH | ||||
| Ortholog function: L-Malate Citrate symporter (TC 2.A.24.2.4) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036020 | 21 | 4.3 | TTGCAAACGGATTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38770 | 27 | 4.2 | TTGCAAACGGATACAA |
|
Position: -32
Score: 5 Sequence: AAGAAAGCGTTTACAA
Locus tag: RBAM_036040
|
||||
| RBAM_036040 | -32 | 5 | AAGAAAGCGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmX | ||||
| Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036040 | -32 | 5 | AAGAAAGCGTTTACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38810 | -35 | 5 | AAGAAAGCGTTTACAA |
|
Position: -46
Score: 4.7 Sequence: GTGAAAGCGCTTACCA
Locus tag: RBAM_036180
|
||||
| RBAM_036180 | -46 | 4.7 | GTGAAAGCGCTTACCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citH | ||||
| Ortholog function: Ca2+/citrate complex secondary transporter | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036180 | -46 | 4.7 | GTGAAAGCGCTTACCA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39060 | -46 | 4.8 | ATGGAAGCGCTTACCA |
|
Position: -230
Score: 4.9 Sequence: ATGAAAGCGTTGGCAT
Locus tag: RBAM_036190
|
||||
| RBAM_036190 | -230 | 4.9 | ATGAAAGCGTTGGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bglS | ||||
| Ortholog function: Endo-beta-1,3-1,4 glucanase (Licheninase) (EC 3.2.1.73) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036190 | -230 | 4.9 | ATGAAAGCGTTGGCAT |
| -34 | 4.5 | AAGAAATCGCTTTCAA | ||
| Bacillus pumilus SAFR-032 | BPUM_0463 | -38 | 5 | AAGAAAACGCTTTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39070 | -34 | 5 | TAGAAAACGCTTTCAA |
|
Position: -257
Score: 4.5 Sequence: ATGTAAGCGTTGACAC
Locus tag: RBAM_036360
|
||||
| RBAM_036360 | -257 | 4.5 | ATGTAAGCGTTGACAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bglP | ||||
| Ortholog function: PTS system, aryl-phospho-beta-glucoside-specific component IIABC (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036360 | -257 | 4.5 | ATGTAAGCGTTGACAC |
| Bacillus licheniformis DSM 13 | BLi04215 | -286 | 5.1 | ATGAAAGCGTTGACAT |
| Bacillus pumilus SAFR-032 | BPUM_3566 | -320 | 4.6 | AAGAAAGCGTTGACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39270 | -253 | 5.1 | ATGAAAGCGTTGACAT |
|
Position: -45
Score: 4.9 Sequence: TTGAAAGCGTTTTAAG
Locus tag: RBAM_036390
|
||||
| RBAM_036390 | -45 | 4.9 | TTGAAAGCGTTTTAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: abnB | ||||
| Ortholog function: Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036390 | -45 | 4.9 | TTGAAAGCGTTTTAAG |
| Bacillus clausii KSM-K16 | ABC3369 | -61 | 4.7 | TTGAAAGCGGTGCCAA |
| Bacillus halodurans C-125 | BH1878 | -40 | 4.2 | TTGTAAGGGTTTTCAC |
| Bacillus licheniformis DSM 13 | BLi04220 | -30 | 5.2 | ATGAAAGCGTTTTAAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39330 | -46 | 5 | ATGTAAGCGTTTAAAA |
|
Position: -33
Score: 4.6 Sequence: TTGTAAGCGAATACAA
Locus tag: RBAM_036470
|
||||
| RBAM_036470 | -33 | 4.6 | TTGTAAGCGAATACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: Nucleoside permease NupC | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036470 | -33 | 4.6 | TTGTAAGCGAATACAA |
| Bacillus licheniformis DSM 13 | BLi04228 | -34 | 4.6 | ATGTAAGCGAATACAT |
| Bacillus pumilus SAFR-032 | BPUM_3586 | -31 | 4.5 | ATGTAAACGAATTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU39410 | -33 | 4.6 | TTGTAAGCGAATACAA |
|
Position: -177
Score: 4.5 Sequence: ATGTAACCGTTTGCTT
Position: -102
Score: 4.8 Sequence: TTGTAAGCGTTTAATT
Locus tag: RBAM_036780
|
||||
| RBAM_036780 | -177 | 4.5 | ATGTAACCGTTTGCTT | |
| -102 | 4.8 | TTGTAAGCGTTTAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolA | ||||
| Ortholog function: Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_036780 | -177 | 4.5 | ATGTAACCGTTTGCTT |
| -102 | 4.8 | TTGTAAGCGTTTAATT | ||
| 67 | 4.5 | ATGAAGACGTTATCAA | ||
| Bacillus clausii KSM-K16 | ABC0422 | -35 | 4.5 | ATGAAAGCGGTTTACT |
| Bacillus licheniformis DSM 13 | BLi04251 | -196 | 4.3 | GTGTAAACGTTTTATT |
| -132 | 4.8 | TTGTAAGCGTTTAATT | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39760 | -106 | 4.9 | TTGAAAGCGTTTAATT |