Propagation of CcpA regulog to Bacillus selenitireducens MLS10
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus selenitireducens MLS10 |
| Orthologous TF(s) | BselDRAFT_0088 |
| Regulated genes | 26 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -71
Score: 4.9 Sequence: ATGACAGCGCTTTCTT
Locus tag: BselDRAFT_2464
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| BselDRAFT_2464 | -71 | 4.9 | ATGACAGCGCTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3680 | ||||
| Ortholog function: Predicted beta-xyloside ABC transporter, substrate-binding component | ||||
| Bacillus halodurans C-125 | BH3680 | 6 | 4.9 | AGGAAAACGCTTACAA |
| Oceanobacillus iheyensis HTE831 | OB3123 | 9 | 4.7 | AAGAAAGCGTTTACAG |
| Paenibacillus sp. JDR-2 | Pjdr2_0728 | -8 | 4.6 | TTGTAAACGTGTTCAA |
|
Position: -111
Score: 4.5 Sequence: ATGAAAGCGTTTCAAC
Locus tag: BselDRAFT_2470
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| BselDRAFT_2470 | -111 | 4.5 | ATGAAAGCGTTTCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
| Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
| Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
| Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
|
Position: -72
Score: 4.6 Sequence: ATGTAAGCGCTTTAAC
Locus tag: BselDRAFT_1579
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| BselDRAFT_1579 | -72 | 4.6 | ATGTAAGCGCTTTAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mmgA | ||||
| Ortholog function: 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2739 | -16 | 4.7 | TTGAAAGGGCTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_022450 | -43 | 4.6 | GTGTAAGCGTTATCTT |
| Bacillus halodurans C-125 | BH3801 | -65 | 5 | ATGTAAGCGCTTAAAT |
| Bacillus pumilus SAFR-032 | BPUM_3373 | -32 | 4.9 | ATGTAAGCGGTAACAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24170 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
| Geobacillus kaustophilus HTA426 | GK3397 | -40 | 4.6 | TTGTAATCGCTTTCTT |
|
Position: -303
Score: 4.4 Sequence: AAGTAAGCGATTACAA
Locus tag: BselDRAFT_1589
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| BselDRAFT_1589 | -303 | 4.4 | AAGTAAGCGATTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolJ | ||||
| Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) | ||||
| Bacillus cereus ATCC 14579 | BC5335 | -184 | 4.5 | AAAAAAGCGTTTACAT |
| Paenibacillus sp. JDR-2 | Pjdr2_6054 | -236 | 4.5 | ATTATAGCGCTTACAA |
|
Position: -328
Score: 4.5 Sequence: ATGAAAGGGCTTTAAT
Locus tag: BselDRAFT_0745
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| BselDRAFT_0745 | -328 | 4.5 | ATGAAAGGGCTTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywcJ | ||||
| Ortholog function: Formate/nitrite family of transporters | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1436 | -131 | 4.5 | TCGTAAACGTTTACAA |
| Bacillus cereus ATCC 14579 | BC1308 | -136 | 5.1 | TTGTAAACGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38060 | -142 | 4.5 | ATGATAGCGTTTTCGT |
|
Position: -226
Score: 4.7 Sequence: TTGACAACGCTTTCAG
Locus tag: BselDRAFT_0821
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| BselDRAFT_0821 | -226 | 4.7 | TTGACAACGCTTTCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: Glycerol uptake facilitator protein | ||||
| Bacillus cereus ATCC 14579 | BC1034 | -191 | 4.7 | TTGACACCGCTTTCAT |
| Bacillus clausii KSM-K16 | ABC3383 | -198 | 4.2 | ATGTATCCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi00994 | -207 | 4.5 | TTGACAACGCTTTCAC |
| Bacillus pumilus SAFR-032 | BPUM_0882 | -191 | 4.9 | TTGACAACGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU09280 | -182 | 4.7 | TTGACACCGCTTTCAT |
| Geobacillus kaustophilus HTA426 | GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB2476 | -164 | 4.7 | TTGACAACGCTTTCAG |
|
Position: -66
Score: 4 Sequence: TTGTAACCCTTTACAG
Locus tag: BselDRAFT_0859
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| BselDRAFT_0859 | -66 | 4 | TTGTAACCCTTTACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msmX | ||||
| Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2303 | -30 | 4.4 | ATGAAATCGATTACAT |
| Bacillus clausii KSM-K16 | ABC1514 | -48 | 4.6 | ATGAAAGGGGTTACAA |
| Bacillus halodurans C-125 | BH1140 | -47 | 4.6 | TTGTAAGCGCTACAAT |
| Bacillus licheniformis DSM 13 | BLi01052 | -34 | 4.6 | GTTAAAGCGCTTACAT |
| Bacillus pumilus SAFR-032 | BPUM_0922 | -41 | 4.1 | AGTGAAGCGCTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB1134 | -37 | 4.1 | ATGTAATCGTTAACAC |
|
Position: -140
Score: 5.1 Sequence: TTGTAAGCGCTTACTT
Locus tag: BselDRAFT_1912
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| BselDRAFT_1912 | -140 | 5.1 | TTGTAAGCGCTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoA | ||||
| Ortholog function: Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008300 | 433 | 4.9 | ATGTAAGCGTTTGCTT |
| Bacillus licheniformis DSM 13 | BLi00849 | 415 | 4.9 | ATGTAAGCGTTTGCTT |
| Bacillus pumilus SAFR-032 | BPUM_0451 | 415 | 4.9 | ATGTAAGCGTTTGCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08060 | 433 | 4.9 | ATGTAAGCGTTTGCTT |
|
Position: 29
Score: 4.6 Sequence: TTGGAAGCGCTTTCTC
Locus tag: BselDRAFT_1913
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| BselDRAFT_1913 | 29 | 4.6 | TTGGAAGCGCTTTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoR | ||||
| Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008340 | -67 | 5 | TTGAAAGCGCTTTATT |
| Bacillus cereus ATCC 14579 | BC2766 | -78 | 5 | TTGAAAACGCTTTTAT |
| Bacillus halodurans C-125 | BH1826 | -117 | 4.7 | TTGTTAGCGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi00853 | -51 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_0455 | -59 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08100 | -67 | 5 | TTGAAAGCGCTTTATT |
|
Position: 4
Score: 4.8 Sequence: ATGTAAGCGATATCAT
Locus tag: BselDRAFT_0092
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| BselDRAFT_0092 | 4 | 4.8 | ATGTAAGCGATATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acuB | ||||
| Ortholog function: Component of the acetoin degradation regulation pathway | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0460 | -70 | 4.7 | ATGAAAACGATTTAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026820 | -72 | 4.9 | TTGAAAACGCTTTATA |
| Bacillus licheniformis DSM 13 | BLi03121 | -69 | 4.9 | ATGAAAACGCTTAATA |
| Bacillus pumilus SAFR-032 | BPUM_2618 | -74 | 4.4 | GTGAAACCGTTTTAAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU29700 | -75 | 4.9 | TTGAAAACGCTTTATA |
|
Position: -47
Score: 4.8 Sequence: ATGAAAGCGTTTTACA
Locus tag: BselDRAFT_0169
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| BselDRAFT_0169 | -47 | 4.8 | ATGAAAGCGTTTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mdh | ||||
| Ortholog function: Malate dehydrogenase (EC 1.1.1.37) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0506 | -107 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026160 | -114 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus clausii KSM-K16 | ABC2713 | 174 | 4.6 | TTGGAATCGTTTTCAA |
| Bacillus licheniformis DSM 13 | BLi03060 | -115 | 4.6 | ATGTAAGCATTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2554 | -111 | 4.6 | ATGTAAGCATTTTCTT |
| -69 | 4.5 | TGGATAGCGCTTTCAA | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29120 | -114 | 4.6 | ATGTAAGCATTTTCTT |
|
Position: -283
Score: 4.3 Sequence: GTGGTAGCGCTTACAA
Locus tag: BselDRAFT_0355
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| BselDRAFT_0355 | -283 | 4.3 | GTGGTAGCGCTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lutR | ||||
| Ortholog function: Lactate-responsive regulator, GntR family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2010 | -87 | 4.6 | ATGTAAGCGCAACCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_031490 | -181 | 4.7 | ATGTAAGCGATTACTT |
| Bacillus halodurans C-125 | BH1835 | -70 | 4.8 | TTTAAAACGCTTACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34180 | -254 | 5 | ATGTAAGCGGTTTCTA |
| Geobacillus kaustophilus HTA426 | GK0396 | -343 | 4.8 | ATAAAAGCGTTTTCAG |
| Oceanobacillus iheyensis HTE831 | OB0369 | -36 | 4.1 | ATGAAATCGCTTCATT |
|
Position: -45
Score: 4.9 Sequence: ATGATAGCGGTTTCAA
Locus tag: BselDRAFT_0389
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| BselDRAFT_0389 | -45 | 4.9 | ATGATAGCGGTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndk | ||||
| Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1096 | -104 | 4.3 | ATTAAATCGTTTTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_020890 | -37 | 4.5 | TTGAAAGCCTATACAT |
| Bacillus clausii KSM-K16 | ABC1890 | -70 | 4.4 | TTGTTAGCGTTTTCCT |
| Bacillus licheniformis DSM 13 | BLi02408 | -39 | 4.5 | TTGAAAGCCTATACAT |
| Bacillus pumilus SAFR-032 | BPUM_2004 | -43 | 4.3 | ATGTAAGCCTATACAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU22730 | -38 | 4.1 | GTGAAAGCCTATACAT |
| Geobacillus kaustophilus HTA426 | GK2209 | -105 | 4.4 | TTATTAGCGCTTTCAA |
|
Position: -61
Score: 4.3 Sequence: ATGAAAGCGATTAACA
Locus tag: BselDRAFT_0472
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| BselDRAFT_0472 | -61 | 4.3 | ATGAAAGCGATTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: odhA | ||||
| Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_019130 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Bacillus cereus ATCC 14579 | BC1252 | -101 | 4.3 | AAGAAAACATTTACAT |
| Bacillus clausii KSM-K16 | ABC2114 | -63 | 4.8 | TTGTAAGCGCTTGAAA |
| Bacillus halodurans C-125 | BH2206 | -64 | 5 | ATGAAAGCGTTATAAA |
| Bacillus licheniformis DSM 13 | BLi02260 | -100 | 4.3 | GTGGAAGCGTTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_1862 | -101 | 4.7 | TTGGAAGCGTTTTATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU19370 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
| Geobacillus kaustophilus HTA426 | GK1023 | -123 | 4.1 | GTGAAAACGTTTATAC |
| Oceanobacillus iheyensis HTE831 | OB1089 | -51 | 4.3 | TTTGAACCGTTTTCAT |
| Paenibacillus sp. JDR-2 | Pjdr2_4724 | -242 | 4.4 | ATGAATACGCTTTAAA |
|
Position: -75
Score: 4 Sequence: AAAAAAACGTTGACAA
Locus tag: BselDRAFT_1407
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| BselDRAFT_1407 | -75 | 4 | AAAAAAACGTTGACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsR | ||||
| Ortholog function: Ribose operon repressor, LacI family | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2673 | -34 | 4.5 | ATGTAACCGGTTACAG |
| Bacillus clausii KSM-K16 | ABC3549 | -33 | 4.1 | CTGTAACCGGTTACAT |