Propagation of CcpA regulog to Geobacillus thermodenitrificans NG80-2
Source regulog: | CcpA - Bacillales |
Regulator type: | Transcription factor |
Regulator family: | LacI |
Regulation mode: | |
Biological process: | Carbon catabolism |
Effector: | HPr, phosphocarrier protein |
Phylum: | Firmicutes |
Propagated regulon: | |
Target genome | Geobacillus thermodenitrificans NG80-2 |
Orthologous TF(s) | GTNG_2715 |
Regulated genes | 27 |

Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -249
Score: 4.3 Sequence: TAAAAAGCGTTTTCTT
Locus tag: GTNG_0369
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GTNG_0369 | -249 | 4.3 | TAAAAAGCGTTTTCTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: lutR | ||||
Ortholog function: Lactate-responsive regulator, GntR family | ||||
Anoxybacillus flavithermus WK1 | Aflv_2010 | -87 | 4.6 | ATGTAAGCGCAACCAT |
Bacillus amyloliquefaciens FZB42 | RBAM_031490 | -181 | 4.7 | ATGTAAGCGATTACTT |
Bacillus halodurans C-125 | BH1835 | -70 | 4.8 | TTTAAAACGCTTACAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU34180 | -254 | 5 | ATGTAAGCGGTTTCTA |
Geobacillus kaustophilus HTA426 | GK0396 | -343 | 4.8 | ATAAAAGCGTTTTCAG |
Oceanobacillus iheyensis HTE831 | OB0369 | -36 | 4.1 | ATGAAATCGCTTCATT |
Position: -38
Score: 5.2 Sequence: TTGAAAGCGTTGTCAA
Locus tag: GTNG_0504
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GTNG_0504 | -38 | 5.2 | TTGAAAGCGTTGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dctA | ||||
Ortholog function: C4-dicarboxylate transport protein | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_004800 | -54 | 5.3 | TTGAAAACGCTATCAT |
Bacillus pumilus SAFR-032 | BPUM_0419 | -72 | 4.8 | TTGAAATCGCTATCAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU04470 | -64 | 5.3 | ATGAAAACGCTATCAT |
Position: -33
Score: 4.5 Sequence: AGGAAAACGATTTCAA
Locus tag: GTNG_0543
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GTNG_0543 | -33 | 4.5 | AGGAAAACGATTTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: msmX | ||||
Ortholog function: Maltose/maltodextrin transport ATP-binding protein (EC 3.6.3.19) | ||||
Anoxybacillus flavithermus WK1 | Aflv_2303 | -30 | 4.4 | ATGAAATCGATTACAT |
Bacillus clausii KSM-K16 | ABC1514 | -48 | 4.6 | ATGAAAGGGGTTACAA |
Bacillus halodurans C-125 | BH1140 | -47 | 4.6 | TTGTAAGCGCTACAAT |
Bacillus licheniformis DSM 13 | BLi01052 | -34 | 4.6 | GTTAAAGCGCTTACAT |
Bacillus pumilus SAFR-032 | BPUM_0922 | -41 | 4.1 | AGTGAAGCGCTTTCAA |
Oceanobacillus iheyensis HTE831 | OB1134 | -37 | 4.1 | ATGTAATCGTTAACAC |
Position: -36
Score: 4.8 Sequence: TTGAAAACGCTTCAAT
Locus tag: GTNG_0817
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GTNG_0817 | -36 | 4.8 | TTGAAAACGCTTCAAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ywcB | ||||
Ortholog function: Hypothetical membrane spanning protein | ||||
Geobacillus kaustophilus HTA426 | GK0929 | -37 | 4.8 | TTGAAAACGCTTGAAT |
Position: -201
Score: 4.5 Sequence: GTGAAAACGTTTATAT
Locus tag: GTNG_0885
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GTNG_0885 | -201 | 4.5 | GTGAAAACGTTTATAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: odhA | ||||
Ortholog function: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_019130 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
Bacillus cereus ATCC 14579 | BC1252 | -101 | 4.3 | AAGAAAACATTTACAT |
Bacillus clausii KSM-K16 | ABC2114 | -63 | 4.8 | TTGTAAGCGCTTGAAA |
Bacillus halodurans C-125 | BH2206 | -64 | 5 | ATGAAAGCGTTATAAA |
Bacillus licheniformis DSM 13 | BLi02260 | -100 | 4.3 | GTGGAAGCGTTTTTAT |
Bacillus pumilus SAFR-032 | BPUM_1862 | -101 | 4.7 | TTGGAAGCGTTTTATT |
Bacillus subtilis subsp. subtilis str. 168 | BSU19370 | -101 | 4.7 | TTGGAAGCGTTTTTAT |
Geobacillus kaustophilus HTA426 | GK1023 | -123 | 4.1 | GTGAAAACGTTTATAC |
Oceanobacillus iheyensis HTE831 | OB1089 | -51 | 4.3 | TTTGAACCGTTTTCAT |
Paenibacillus sp. JDR-2 | Pjdr2_4724 | -242 | 4.4 | ATGAATACGCTTTAAA |
Position: -47
Score: 4.2 Sequence: ATGAAAGCGCTAAGAC
Locus tag: GTNG_1061
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GTNG_1061 | -47 | 4.2 | ATGAAAGCGCTAAGAC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: sucC | ||||
Ortholog function: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_015920 | -52 | 4.8 | ATGAAAGCGCAGTCTA |
Bacillus licheniformis DSM 13 | BLi01829 | -53 | 4.8 | ATGAAAGCGCAGTCTA |
Bacillus pumilus SAFR-032 | BPUM_1507 | -57 | 4.8 | ATGAAAGCGCAGTCTA |
Bacillus subtilis subsp. subtilis str. 168 | BSU16090 | -51 | 4.8 | ATGAAAGCGCAGTCTA |
Geobacillus kaustophilus HTA426 | GK1208 | -47 | 4.2 | ATGAAAGCGCTAAGAC |
Position: -201
Score: 4.9 Sequence: TTGACAACGCTTACAA
Locus tag: GTNG_1215
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GTNG_1215 | -201 | 4.9 | TTGACAACGCTTACAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glpF | ||||
Ortholog function: Glycerol uptake facilitator protein | ||||
Bacillus cereus ATCC 14579 | BC1034 | -191 | 4.7 | TTGACACCGCTTTCAT |
Bacillus clausii KSM-K16 | ABC3383 | -198 | 4.2 | ATGTATCCGTTTACAA |
Bacillus licheniformis DSM 13 | BLi00994 | -207 | 4.5 | TTGACAACGCTTTCAC |
Bacillus pumilus SAFR-032 | BPUM_0882 | -191 | 4.9 | TTGACAACGTTTTCAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU09280 | -182 | 4.7 | TTGACACCGCTTTCAT |
Geobacillus kaustophilus HTA426 | GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA |
Oceanobacillus iheyensis HTE831 | OB2476 | -164 | 4.7 | TTGACAACGCTTTCAG |
Position: -49
Score: 4.8 Sequence: TTGAAAACGATAACAT
Locus tag: GTNG_1750
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GTNG_1750 | -49 | 4.8 | TTGAAAACGATAACAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: gmuB | ||||
Ortholog function: PTS system, cellobiose-specific IIB component (EC 2.7.1.69) | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_035870 | -38 | 4.7 | ATGAAAACGTTTTAAC |
Bacillus clausii KSM-K16 | ABC0481 | -60 | 4.9 | TTGTAAGCGGATTCAT |
Bacillus halodurans C-125 | BH3921 | -36 | 4.2 | GTGAAAGCGCTTATCA |
Bacillus licheniformis DSM 13 | BLi02564 | -34 | 4.8 | GTGAAAGCGCTTTTAA |
Bacillus pumilus SAFR-032 | BPUM_2121 | -37 | 4.2 | CTGGAAGCGCTTTTAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU05810 | -33 | 5 | ATGTAAGCGTTTTAAT |
Geobacillus kaustophilus HTA426 | GK1859 | -50 | 4.8 | TTGAAAACGATATCAT |
Oceanobacillus iheyensis HTE831 | OB2760 | -62 | 4.8 | TTGTAACCGTTTTCTT |
Position: -67
Score: 5 Sequence: ATGAAAGCGTTATAAT
Locus tag: GTNG_1757
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GTNG_1757 | -67 | 5 | ATGAAAGCGTTATAAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: xylA | ||||
Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
Position: -122
Score: 5 Sequence: TTGAAACCGCTTACTA
Locus tag: GTNG_1773
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GTNG_1773 | -122 | 5 | TTGAAACCGCTTACTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: BH1064 | ||||
Ortholog function: ABC-type sugar transport system, substrate-binding protein | ||||
Bacillus halodurans C-125 | BH1064 | -114 | 4.7 | ATGTAAGCGATTACTT |
Position: 6
Score: 4.8 Sequence: AAGAAAGCGTTAACAT
Locus tag: GTNG_1780
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GTNG_1780 | 6 | 4.8 | AAGAAAGCGTTAACAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: BH3680 | ||||
Ortholog function: Predicted beta-xyloside ABC transporter, substrate-binding component | ||||
Bacillus halodurans C-125 | BH3680 | 6 | 4.9 | AGGAAAACGCTTACAA |
Oceanobacillus iheyensis HTE831 | OB3123 | 9 | 4.7 | AAGAAAGCGTTTACAG |
Paenibacillus sp. JDR-2 | Pjdr2_0728 | -8 | 4.6 | TTGTAAACGTGTTCAA |
Position: -118
Score: 5.1 Sequence: TTAAAAGCGTTTTCAA
Locus tag: GTNG_1794
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GTNG_1794 | -118 | 5.1 | TTAAAAGCGTTTTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: araN | ||||
Ortholog function: Alpha-arabinosides ABC transport system, substrate-binding protein | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_025810 | -32 | 4.4 | ATGCAAGCGCTTTATT |
Bacillus halodurans C-125 | BH0905 | -113 | 5 | ATGTAAACGTTAACAA |
Bacillus licheniformis DSM 13 | BLi03024 | -65 | 5 | TTGTAAGCGTTTTAAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU28750 | -38 | 5 | TTGAAAGCGTTTTATT |
Position: -127
Score: 4.8 Sequence: TTGAAAACGCTTCAAT
Locus tag: GTNG_1801
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GTNG_1801 | -127 | 4.8 | TTGAAAACGCTTCAAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: araF | ||||
Ortholog function: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) | ||||
Bacillus clausii KSM-K16 | ABC0409 | -35 | 5.4 | TTGAAAGCGTTATCAA |
Bacillus halodurans C-125 | BH3442 | -64 | 5 | ATGACAACGCTTTCAT |
Bacillus licheniformis DSM 13 | BLi00442 | -128 | 4.8 | ATGTAAGCGCTTCAAA |
Geobacillus kaustophilus HTA426 | GK1910 | -129 | 4.4 | TTGAAAACGCTTCAAC |
Position: -49
Score: 4.6 Sequence: ATGAAAGCGCTTTTGA
Locus tag: GTNG_1837
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GTNG_1837 | -49 | 4.6 | ATGAAAGCGCTTTTGA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: endR | ||||
Ortholog function: Probable HTH-type transcriptional regulator endR, LacI family | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_018000 | 0 | 4.3 | ATGAAAGCGGTTCTAG |
Geobacillus kaustophilus HTA426 | GK1942 | -50 | 4.5 | ATGAAAACGCTTTTGA |
Position: -55
Score: 4.6 Sequence: TTGTAAGCGTTTGTAA
Locus tag: GTNG_1847
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GTNG_1847 | -55 | 4.6 | TTGTAAGCGTTTGTAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: mtlA | ||||
Ortholog function: PTS family mannitol-permease II, BC component | ||||
Anoxybacillus flavithermus WK1 | Aflv_1566 | -58 | 4.5 | CTGTAAGCGCTTTAAT |
Bacillus amyloliquefaciens FZB42 | RBAM_004230 | -96 | 4.6 | TTGTAAGCGTTTTATG |
Bacillus halodurans C-125 | BH3854 | -39 | 4.3 | ATGAGAGCGCTTTATT |
Bacillus licheniformis DSM 13 | BLi00505 | -94 | 4.4 | CTGTAAGCGTTTTAAT |
Bacillus pumilus SAFR-032 | BPUM_0369 | -106 | 4.1 | GTGAAAGCGTTTTACG |
Bacillus subtilis subsp. subtilis str. 168 | BSU03981 | -95 | 4 | CTGTAAGCGTTTTAAC |
Geobacillus kaustophilus HTA426 | GK1948 | -54 | 4.8 | TTGTAAGCGTTTTAAG |
Oceanobacillus iheyensis HTE831 | OB2603 | -75 | 4.4 | TTGTAAGCGGATTCCT |
Paenibacillus sp. JDR-2 | Pjdr2_6226 | -33 | 4.1 | AAGAAAGCGATTTTAT |
Position: -49
Score: 4.4 Sequence: ACGAAAGCGGTTTCTT
Locus tag: GTNG_2300
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GTNG_2300 | -49 | 4.4 | ACGAAAGCGGTTTCTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: mutB | ||||
Ortholog function: Methylmalonyl-CoA mutase, small subunit (EC 5.4.99.2) | ||||
Anoxybacillus flavithermus WK1 | Aflv_0965 | -39 | 4.3 | AAGAAAGCGTTTTAAC |
Position: -165
Score: 5 Sequence: TTGTAAGCGTATACAA
Locus tag: GTNG_2591
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GTNG_2591 | -165 | 5 | TTGTAAGCGTATACAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dat | ||||
Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
Anoxybacillus flavithermus WK1 | Aflv_0590 | -170 | 4.8 | ATGTAAGCGGATACAT |
Bacillus cereus ATCC 14579 | BC1396 | -153 | 5 | TTGTAAACGTTAACAA |
Bacillus licheniformis DSM 13 | BLi02962 | -225 | 5 | ATGTAAGCGTATACAA |
Bacillus pumilus SAFR-032 | BPUM_2473 | -200 | 4.6 | GTGTAAGCGTATACAT |
Geobacillus kaustophilus HTA426 | GK2662 | -165 | 5.1 | ATGTAAGCGCATTCAA |
Position: -106
Score: 4.6 Sequence: ATGTAAGCACTTTCTT
Locus tag: GTNG_2660
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GTNG_2660 | -106 | 4.6 | ATGTAAGCACTTTCTT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: mmgD | ||||
Ortholog function: Citrate synthase (si) (EC 2.3.3.1) | ||||
Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
Anoxybacillus flavithermus WK1 | Aflv_0504 | -107 | 4.6 | ATGTAAGCATTTTCTT |
Bacillus amyloliquefaciens FZB42 | RBAM_026180 | -114 | 4.6 | ATGTAAGCATTTTCTT |
Bacillus amyloliquefaciens FZB42 | RBAM_022420 | -43 | 4.6 | GTGTAAGCGTTATCTT |
Bacillus clausii KSM-K16 | ABC1805 | -63 | 4.9 | ATGTAAGCGCTTTATT |
Bacillus clausii KSM-K16 | ABC2715 | 174 | 4.6 | TTGGAATCGTTTTCAA |
Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
Bacillus licheniformis DSM 13 | BLi03062 | -115 | 4.6 | ATGTAAGCATTTTCTT |
Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
-69 | 4.5 | TGGATAGCGCTTTCAA | ||
Bacillus pumilus SAFR-032 | BPUM_2556 | -111 | 4.6 | ATGTAAGCATTTTCTT |
-69 | 4.5 | TGGATAGCGCTTTCAA | ||
Bacillus subtilis subsp. subtilis str. 168 | BSU24140 | -37 | 4.9 | TTGTAAGCGCTGTCTA |
Bacillus subtilis subsp. subtilis str. 168 | BSU29140 | -114 | 4.6 | ATGTAAGCATTTTCTT |
Oceanobacillus iheyensis HTE831 | OB2269 | -39 | 4.4 | TTGACTGCGCTTTCAA |
Position: -31
Score: 4.4 Sequence: ATGTAACCACTTACAT
Locus tag: GTNG_2711
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GTNG_2711 | -31 | 4.4 | ATGTAACCACTTACAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: acsA | ||||
Ortholog function: Acetyl-coenzyme A synthetase (EC 6.2.1.1) | ||||
Anoxybacillus flavithermus WK1 | Aflv_0462 | 237 | 4.9 | ATGAAAGAGTTTTCAA |
Bacillus amyloliquefaciens FZB42 | RBAM_026800 | -102 | 4.5 | TATAAAGCGTTTTCAA |
Bacillus clausii KSM-K16 | ABC2760 | -65 | 4.7 | TTGAAAACGTTACCTT |
0 | 4.8 | ATGAAAGCGCTTCCTG | ||
Bacillus halodurans C-125 | BH3234 | 6 | 4.4 | TTGCAAGCGCTTCCAG |
Bacillus licheniformis DSM 13 | BLi03119 | 6 | 4.7 | TTGAAAGCGCTGCCAG |
Bacillus pumilus SAFR-032 | BPUM_2616 | -30 | 4.7 | TTGTAAACGTATGCAA |
Bacillus subtilis subsp. subtilis str. 168 | BSU29680 | -101 | 4.5 | TATAAAGCGTTTTCAA |
6 | 4.8 | TTGAAAGCGTTACCAG | ||
Oceanobacillus iheyensis HTE831 | OB0022 | -36 | 4.5 | TTGTAATCGTTTGCAA |
Paenibacillus sp. JDR-2 | Pjdr2_3796 | -56 | 5 | TTGAAAGCGTATTCTT |
Position: -247
Score: 4.5 Sequence: ATGTAAGTGGTTACAT
Locus tag: GTNG_2712
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GTNG_2712 | -247 | 4.5 | ATGTAAGTGGTTACAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: acuA | ||||
Ortholog function: Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor | ||||
Anoxybacillus flavithermus WK1 | Aflv_0461 | -70 | 4.7 | ATGAAAACGATTTAAT |
Bacillus amyloliquefaciens FZB42 | RBAM_026810 | -72 | 4.9 | TTGAAAACGCTTTATA |
Bacillus licheniformis DSM 13 | BLi03120 | -69 | 4.9 | ATGAAAACGCTTAATA |
Bacillus pumilus SAFR-032 | BPUM_2617 | -74 | 4.4 | GTGAAACCGTTTTAAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU29690 | -75 | 4.9 | TTGAAAACGCTTTATA |
Position: -40
Score: 4.7 Sequence: TTGAAAAGGTTTTCAA
Locus tag: GTNG_3126
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GTNG_3126 | -40 | 4.7 | TTGAAAAGGTTTTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: BH3845 | ||||
Ortholog function: Predicted beta-glucoside-regulated ABC transport system, sugar-binding protein | ||||
Bacillus halodurans C-125 | BH3845 | -81 | 4.9 | ATGAAAGCGATTTCTT |
24 | 4.6 | ATGATAGCGCTTTCTG | ||
Bacillus pumilus SAFR-032 | BPUM_3238 | -37 | 4.9 | TTGATAACGCTTACAA |
Geobacillus kaustophilus HTA426 | GK3207 | -41 | 4.6 | TTGAAAGGGGTTTCAA |
Position: -115
Score: 4.3 Sequence: TTGGAAGGGCTTACTA
Locus tag: GTNG_3361
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GTNG_3361 | -115 | 4.3 | TTGGAAGGGCTTACTA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pta | ||||
Ortholog function: Phosphate acetyltransferase (EC 2.3.1.8) | ||||
Bacillus amyloliquefaciens FZB42 | RBAM_034850 | -99 | 5 | TTGAAAGCGCTATAAT |
Bacillus clausii KSM-K16 | ABC3910 | -143 | 4.3 | TTGAAAACCCTTTCCT |
-124 | 4.5 | ATGGAAGCGTAATCTA | ||
Bacillus halodurans C-125 | BH3823 | -194 | 4.8 | TTGGAAACGCTTTAAA |
Bacillus licheniformis DSM 13 | BLi03997 | -104 | 4.3 | GTGTAAACGTTATAAT |
Bacillus pumilus SAFR-032 | BPUM_3415 | -100 | 4.9 | TTGTAAGCGCTATAAT |
Bacillus subtilis subsp. subtilis str. 168 | BSU37660 | -100 | 5 | ATGAAAGCGCTATAAT |
-38 | 4 | AAGAAAGCGTTTTTGT | ||