Propagation of CcpA regulog to Bacillus cereus ATCC 10987
| Source regulog: | CcpA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus cereus ATCC 10987 |
| Orthologous TF(s) | BCE4813 |
| Regulated genes | 22 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -84
Score: 4.5 Sequence: ATGTAAACGCATTTAT
Locus tag: BCE0147
|
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| BCE0147 | -84 | 4.5 | ATGTAAACGCATTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mrp | ||||
| Ortholog function: Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0142 | -34 | 4 | GTGAAACCGAATACAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_001800 | -32 | 4.1 | TTGTAAACGAATACAC |
| Bacillus cereus ATCC 14579 | BC0168 | -84 | 4.5 | ATGTAAACGCATTTAT |
| Bacillus licheniformis DSM 13 | BLi00172 | -31 | 4.5 | TTGTAAACGAATACAA |
| Bacillus pumilus SAFR-032 | BPUM_0145 | -35 | 4.6 | TTGTAAACGAATTCAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU01540 | -32 | 4.1 | TTGTAAACGAATACAC |
|
Position: -33
Score: 5.1 Sequence: TTGAAAGCGTAATCAT
Locus tag: BCE0622
|
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| BCE0622 | -33 | 5.1 | TTGAAAGCGTAATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citH | ||||
| Ortholog function: Ca2+/citrate complex secondary transporter | ||||
| Bacillus cereus ATCC 14579 | BC0562 | -36 | 5.1 | TTGAAAGCGCAATCAT |
|
Position: -39
Score: 4.9 Sequence: TTGTAAACGGTATCAA
Locus tag: BCE0699
|
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| BCE0699 | -39 | 4.9 | TTGTAAACGGTATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: PTS system, trehalose-specific enzyme II, BC component (EC 2.7.1.69) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007970 | 318 | 4 | GTGAAAACGCTTGCGG |
| Bacillus cereus ATCC 14579 | BC0631 | 234 | 4.4 | TTGATAACGCTTGCAG |
| Bacillus halodurans C-125 | BH2216 | 136 | 4.4 | TTGAAAGCCTTGACAT |
| 318 | 4.4 | GTGAAAACGCTTGCTG | ||
| Bacillus licheniformis DSM 13 | BLi00796 | 318 | 4.6 | GTGAAAACGCTTGCAG |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07800 | 318 | 4.6 | GTGAAAACGCTTGCAG |
|
Position: -186
Score: 4.9 Sequence: ATAAAAACGTTTACAT
Locus tag: BCE0729
|
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| BCE0729 | -186 | 4.9 | ATAAAAACGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpT | ||||
| Ortholog function: MFS family major facilitator transporter, glycerol-3-phosphate:cation symporter | ||||
| Bacillus cereus ATCC 14579 | BC0656 | -184 | 4.9 | ATAAAAACGTTTACAT |
| Bacillus licheniformis DSM 13 | BLi04255 | -203 | 4.8 | TTGACAGCGCTTCCAT |
|
Position: -35
Score: 4.4 Sequence: CTGTAAACGGTTACAT
Locus tag: BCE0732
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| BCE0732 | -35 | 4.4 | CTGTAAACGGTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rbsR | ||||
| Ortholog function: Ribose operon repressor, LacI family | ||||
| Bacillus cereus ATCC 14579 | BC0659 | -35 | 4.4 | CTGTAAACGGTTACAT |
|
Position: -42
Score: 4.7 Sequence: TTGAAAAGGTTTACAA
Locus tag: BCE0880
|
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| BCE0880 | -42 | 4.7 | TTGAAAAGGTTTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BC0805 | ||||
| Ortholog function: Outer surface protein of unknown function, cellobiose operon | ||||
| Bacillus cereus ATCC 14579 | BC0805 | -105 | 4.6 | AAGAAAGCGGATTCAA |
| -42 | 4.7 | TTGAAAAGGTTTACAA | ||
|
Position: -187
Score: 4.9 Sequence: ATGAAAGCGTGTTCAT
Locus tag: BCE1009
|
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| BCE1009 | -187 | 4.9 | ATGAAAGCGTGTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citS | ||||
| Ortholog function: Two-component sensor kinase | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007780 | 1297 | 4.5 | TTGATAACGCTTTCGA |
| Bacillus cereus ATCC 14579 | BC0936 | -187 | 4.9 | ATGAAAGCGTGTTCAT |
| Bacillus clausii KSM-K16 | ABC1011 | -42 | 4.2 | TTGAAACCGTTATACT |
| Bacillus halodurans C-125 | BH3839 | -41 | 4.8 | ATGAAAGCGTTTATTA |
| Bacillus licheniformis DSM 13 | BLi00225 | 1303 | 4.5 | TTGATAACGCTTTCGA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU07580 | 1297 | 4.5 | TTGATAACGCTTTCGA |
|
Position: -207
Score: 4.7 Sequence: TTGACACCGCTTTCAT
Position: -34
Score: 5.1 Sequence: TTGAAAGCGTTTAAAT
Locus tag: BCE1124
|
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| BCE1124 | -207 | 4.7 | TTGACACCGCTTTCAT | |
| -34 | 5.1 | TTGAAAGCGTTTAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: Glycerol uptake facilitator protein | ||||
| Bacillus cereus ATCC 14579 | BC1034 | -191 | 4.7 | TTGACACCGCTTTCAT |
| Bacillus clausii KSM-K16 | ABC3383 | -198 | 4.2 | ATGTATCCGTTTACAA |
| Bacillus licheniformis DSM 13 | BLi00994 | -207 | 4.5 | TTGACAACGCTTTCAC |
| Bacillus pumilus SAFR-032 | BPUM_0882 | -191 | 4.9 | TTGACAACGTTTTCAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU09280 | -182 | 4.7 | TTGACACCGCTTTCAT |
| Geobacillus kaustophilus HTA426 | GK1359 | -206 | 5.1 | TTGACAGCGTTTTCAA |
| Oceanobacillus iheyensis HTE831 | OB2476 | -164 | 4.7 | TTGACAACGCTTTCAG |
|
Position: -122
Score: 4.7 Sequence: AAGTAAGCGTTTTCTT
Locus tag: BCE1416
|
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| BCE1416 | -122 | 4.7 | AAGTAAGCGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lutA | ||||
| Ortholog function: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit | ||||
| Anoxybacillus flavithermus WK1 | Aflv_2009 | -30 | 4.7 | AAGAAAACGTTTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_031470 | -181 | 4.7 | ATGTAAGCGATTACTT |
| Bacillus cereus ATCC 14579 | BC1303 | -122 | 4.7 | AAGTAAGCGTTTTCTT |
| Bacillus clausii KSM-K16 | ABC0975 | -69 | 4.8 | TTGTAAGTGCTTACAT |
| Bacillus halodurans C-125 | BH1832 | -70 | 4.8 | TTTAAAACGCTTACAT |
| Geobacillus kaustophilus HTA426 | GK0395 | -343 | 4.8 | ATAAAAGCGTTTTCAG |
| Oceanobacillus iheyensis HTE831 | OB0370 | -36 | 4.1 | ATGAAATCGCTTCATT |
|
Position: -287
Score: 4.7 Sequence: TTGTAAGCGTTTTCTC
Locus tag: BCE1421
|
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| BCE1421 | -287 | 4.7 | TTGTAAGCGTTTTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywcJ | ||||
| Ortholog function: Formate/nitrite family of transporters | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1436 | -131 | 4.5 | TCGTAAACGTTTACAA |
| Bacillus cereus ATCC 14579 | BC1308 | -136 | 5.1 | TTGTAAACGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU38060 | -142 | 4.5 | ATGATAGCGTTTTCGT |
|
Position: -154
Score: 5 Sequence: TTGTAAACGTTAACAA
Locus tag: BCE1516
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| BCE1516 | -154 | 5 | TTGTAAACGTTAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dat | ||||
| Ortholog function: Branched-chain amino acid aminotransferase (EC 2.6.1.42) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0590 | -170 | 4.8 | ATGTAAGCGGATACAT |
| Bacillus cereus ATCC 14579 | BC1396 | -153 | 5 | TTGTAAACGTTAACAA |
| Bacillus licheniformis DSM 13 | BLi02962 | -225 | 5 | ATGTAAGCGTATACAA |
| Bacillus pumilus SAFR-032 | BPUM_2473 | -200 | 4.6 | GTGTAAGCGTATACAT |
| Geobacillus kaustophilus HTA426 | GK2662 | -165 | 5.1 | ATGTAAGCGCATTCAA |
|
Position: 34
Score: 5 Sequence: TTGAAAGCGTAAACAA
Locus tag: BCE2210
|
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| BCE2210 | 34 | 5 | TTGAAAGCGTAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | 34 | 5.1 | TTGAAAGCGCAAACAA |
| Bacillus clausii KSM-K16 | ABC0572 | -72 | 4.7 | TTGACACCGCTTACAA |
| Bacillus halodurans C-125 | BH2757 | -33 | 4.7 | TTGATAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi04048 | -109 | 4.5 | TTGAAAGCGATTAATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | 34 | 4.7 | TTGGAAGCGCAAACAA |
| Geobacillus kaustophilus HTA426 | GK1875 | -59 | 5 | ATGAAAGCGTTATAAT |
|
Position: -79
Score: 5 Sequence: TTGAAAACGCTTTTAT
Locus tag: BCE2794
|
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| BCE2794 | -79 | 5 | TTGAAAACGCTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acoR | ||||
| Ortholog function: Transcriptional activator of acetoin dehydrogenase operon AcoR | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_008340 | -67 | 5 | TTGAAAGCGCTTTATT |
| Bacillus cereus ATCC 14579 | BC2766 | -78 | 5 | TTGAAAACGCTTTTAT |
| Bacillus halodurans C-125 | BH1826 | -117 | 4.7 | TTGTTAGCGCTTTCTT |
| Bacillus licheniformis DSM 13 | BLi00853 | -51 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus pumilus SAFR-032 | BPUM_0455 | -59 | 5.1 | TTGAAAGCGCTTTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU08100 | -67 | 5 | TTGAAAGCGCTTTATT |
|
Position: -54
Score: 4.8 Sequence: ATGCAAACGTTTTCAA
Locus tag: BCE4064
|
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| BCE4064 | -54 | 4.8 | ATGCAAACGTTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cycB | ||||
| Ortholog function: Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein | ||||
| Bacillus clausii KSM-K16 | ABC3520 | -37 | 4.6 | AAGAAAGCGGTTACTT |
| Bacillus halodurans C-125 | BH2019 | -55 | 4.4 | TATAAAACGCTTTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3613 | -51 | 4.8 | AAGAAAGCGTTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34160 | -39 | 5 | TTTAAAGCGCTTTCAT |
|
Position: -233
Score: 4.5 Sequence: AAGAAAGCGTAAACAT
Locus tag: BCE4156
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| BCE4156 | -233 | 4.5 | AAGAAAGCGTAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: drm | ||||
| Ortholog function: Phosphopentomutase (EC 5.4.2.7) | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0998 | -114 | 4.9 | ATGAAAACGTTTTATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_021610 | -74 | 4.5 | ATGTAAACGGTTTATA |
| Bacillus cereus ATCC 14579 | BC4087 | -222 | 4.5 | AAGAAAGCGTAAACAT |
| Bacillus licheniformis DSM 13 | BLi02500 | -99 | 4.1 | GTGTAAACGGTTTATA |
| Bacillus pumilus SAFR-032 | BPUM_2081 | -82 | 4.5 | TTGTAAACGGTTTATA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU23500 | -77 | 4.7 | ATGAAAACGGTTTATA |
|
Position: -36
Score: 4.3 Sequence: ATGTGAACGTTTTCTT
Locus tag: BCE4344
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| BCE4344 | -36 | 4.3 | ATGTGAACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqgQ | ||||
| Ortholog function: Hypothetical Cytosolic Protein | ||||
| Anoxybacillus flavithermus WK1 | Aflv_0894 | -23 | 4.5 | TTGAAAACGCTTATAC |
| Bacillus cereus ATCC 14579 | BC4261 | -57 | 4.3 | ATGTGAACGTTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2216 | -49 | 4.2 | CTGAAAGCGCATTTAT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24860 | -79 | 4.7 | TTGTCAGCGTTTTCTT |
|
Position: -178
Score: 4.3 Sequence: ATGTATACGTTTTCTT
Locus tag: BCE4645
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| BCE4645 | -178 | 4.3 | ATGTATACGTTTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b558 subunit | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_025520 | -143 | 4.3 | ATGTACACGTTTTCTT |
| Bacillus cereus ATCC 14579 | BC4518 | -178 | 4.3 | ATGTATACGTTTTCTT |
| Bacillus clausii KSM-K16 | ABC2664 | -190 | 4.3 | TTGAATCCGTTTTCTT |
| Bacillus licheniformis DSM 13 | BLi02994 | -143 | 4.4 | ATGTACGCGTTTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2503 | -139 | 4.2 | ATGTACGCGGTTTCTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28450 | -139 | 4.4 | ATGTACGCGTTTTCTT |
|
Position: -184
Score: 4.5 Sequence: AAAAAAGCGTTTACAT
Locus tag: BCE5465
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| BCE5465 | -184 | 4.5 | AAAAAAGCGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iolJ | ||||
| Ortholog function: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) | ||||
| Bacillus cereus ATCC 14579 | BC5335 | -184 | 4.5 | AAAAAAGCGTTTACAT |
| Paenibacillus sp. JDR-2 | Pjdr2_6054 | -236 | 4.5 | ATTATAGCGCTTACAA |
|
Position: 13
Score: 4.8 Sequence: ATGTAAACGCTTACCA
Locus tag: BCE5572
|
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| BCE5572 | 13 | 4.8 | ATGTAAACGCTTACCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lrgA | ||||
| Ortholog function: Antiholin-like protein LrgA | ||||
| Bacillus cereus ATCC 14579 | BC5439 | -59 | 5 | ATGTAAACGCTTACTT |
| Bacillus licheniformis DSM 13 | BLi03037 | -68 | 4.8 | TTGAAAACGCTTTTTT |
| Bacillus pumilus SAFR-032 | BPUM_2534 | -68 | 4.5 | TTGTAAACGCTTCATT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU28910 | -68 | 4.9 | TTGTAAGCGCTTTATA |