Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NhaR regulog to Escherichia coli APEC O1

Reference regulog properties
Source regulog: NhaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: activator
Biological process: Osmotic stress response
Effector: Potassium ion
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli APEC O1
Orthologous TF(s) APECO1_1959
Regulated genes 1
Built upon 11 sites [see more]
Predicted regulatory interactions in Escherichia coli APEC O1
Locus tag Position Score Sequence
Position: -102
Score: 4.9
Sequence: TCGTAAAAAGCGA
Locus tag: APECO1_1960
APECO1_1960 -102 4.9 TCGTAAAAAGCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nhaA
Ortholog function: Na+/H+ antiporter
Escherichia coli str. K-12 substr. MG1655 b0019 -103 5.1 TCGTAAAAAACGA
Salmonella typhimurium LT2 STM0039 -104 5.1 TCGTAAAAAACGA
Citrobacter koseri ATCC BAA-895 CKO_03370 -103 5 TCGTAAAAACCGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00016 -92 4.9 TCGTAAAAAGCGA
Enterobacter sp. 638 Ent638_0580 -102 4.5 TCGGTAAAACTGA
Yersinia pestis KIM y3704 -122 4.5 TCGGTTTTTACGA
Serratia proteamaculans 568 Spro_0694 -95 4.5 TCGGTTTTTACGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3880 -124 4.3 TCGTTTTTTTCGA
Edwardsiella tarda EIB202 ETAE_0578 -115 3.5 TCTATTTTTCCGA
Proteus mirabilis HI4320 PMI0011 -96 4.4 TCGAAAAAGCCGA
Photorhabdus luminescens subsp. laumondii TTO1 plu0587 -97 4.7 TCGGTTATAGCGA
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