Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Buchnera aphidicola str. Bp (Baizongia pistaciae)

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Buchnera aphidicola str. Bp (Baizongia pistaciae)
Orthologous TF(s) No orthologous TFs found
Regulated genes 36
Built upon 2301 sites [see more]
Predicted regulatory interactions in Buchnera aphidicola str. Bp (Baizongia pistaciae)
Locus tag Position Score Sequence
Position: -199
Score: 3.8
Sequence: TTTTTTGAAATAAATCAAATGT
Position: -106
Score: 4.2
Sequence: ATTTATGATGTAATTTAAAAAT
Locus tag: bbp002
bbp002 -199 3.8 TTTTTTGAAATAAATCAAATGT
-106 4.2 ATTTATGATGTAATTTAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpB
Ortholog function: ATP synthase subunit A
Escherichia coli str. K-12 substr. MG1655 b3738 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3871 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00078 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04143 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4126 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3480 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4141 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0002 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4518 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3527 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3058 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0046 -265 5.7 TTATGTGATTTAAATCACATTT
Position: -134
Score: 3.7
Sequence: TATTATTAAGTAGATAAAATTA
Locus tag: bbp030
bbp030 -134 3.7 TATTATTAAGTAGATAAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yigL
Ortholog function: Hydrolase (HAD superfamily)
Citrobacter koseri ATCC BAA-895 CKO_00167 -60 3.8 TATTGTGTCAGGCATCATAAAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04322 -56 3.8 TTGTGTGATACACGGTAAAAAA
Enterobacter sp. 638 Ent638_3970 -56 4.3 TTTTGTGATGCGTCACGAAAAA
Yersinia pestis KIM y0401 -144 4.8 AGTTGTGCTATGGCTCACAAAA
Serratia proteamaculans 568 Spro_0197 -88 3.8 TTGTAAGAATTGAATCACAATA
-53 4.2 TCTTGTGCCAGAGGTCACATTT
Edwardsiella tarda EIB202 ETAE_3342 -217 3.9 CGGTGTGATAATCCTCAAACTT
Position: -100
Score: 4.6
Sequence: ATATATGATATATTTTACATTT
Position: -51
Score: 3.3
Sequence: AAGTACGTTTCAAATAACATTT
Position: 6
Score: 4.1
Sequence: AAATCTGAATTAATTAACATTA
Locus tag: bbp033
bbp033 -100 4.6 ATATATGATATATTTTACATTT
-51 3.3 AAGTACGTTTCAAATAACATTT
6 4.1 AAATCTGAATTAATTAACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU-alpha (HU-2)
Escherichia coli str. K-12 substr. MG1655 b4000 -179 3.4 AAACGTGATTTAACGCCTGATT
Citrobacter koseri ATCC BAA-895 CKO_02986 -179 3.4 AAACGTGATTTAACGCCTGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04382 -179 3.4 AAACGTGATTTACCGCCTGAAT
Enterobacter sp. 638 Ent638_0213 -179 3.5 AAACGTGATTTAACGCCTGTTT
Yersinia pestis KIM y0499 -181 3.4 AAACGTGATTTAACGCCTGATT
Serratia proteamaculans 568 Spro_0290 -181 3.4 AAACGTGATTTAACGCCTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0238 -197 3.3 AAACGTGATTTAAGGCCTGAAA
Edwardsiella tarda EIB202 ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Proteus mirabilis HI4320 PMI2771 -183 3.7 AAACGTGATTTAGTGCTTGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0492 -179 3.4 AAACGTGATTTAATGCTTTAAA
Position: -2
Score: 3.6
Sequence: TAATGAAATTTTTTTCTAATTT
Locus tag: bbp059
bbp059 -2 3.6 TAATGAAATTTTTTTCTAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: crr
Ortholog function: PTS system, glucose-specific IIA component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b2417 -209 3.9 TTTTATGATTTGGTTCAATTCT
Salmonella typhimurium LT2 STM2433 -209 4.4 TTTTATGATTTGGTTCAAATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02764 -206 4 TTTTATGATTTGGTTCAAGTCT
Enterobacter sp. 638 Ent638_2945 -271 4.4 TTTTGTGGTCCACTTCAAACTT
-144 4 TTTTATGATTTGGTTCAAGTCT
Serratia proteamaculans 568 Spro_3450 -149 3.6 TTTTTTGATCTGAAGTGCCAAA
Proteus mirabilis HI4320 PMI1830 -275 4.4 TTTTGTGGTAGAGATCAAACTT
-115 3.6 TAACGTAACATGGCTTATATTA
Position: -178
Score: 3.7
Sequence: TTTTTTTAAAATAATCAAATTT
Locus tag: bbp061
bbp061 -178 3.7 TTTTTTTAAAATAATCAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: PTS system phosphocarrier protein
Escherichia coli str. K-12 substr. MG1655 b2415 -209 3.9 TTTTATGATTTGGTTCAATTCT
Salmonella typhimurium LT2 STM2431 -209 4.4 TTTTATGATTTGGTTCAAATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02762 -206 4 TTTTATGATTTGGTTCAAGTCT
Enterobacter sp. 638 Ent638_2943 -271 4.4 TTTTGTGGTCCACTTCAAACTT
-144 4 TTTTATGATTTGGTTCAAGTCT
Serratia proteamaculans 568 Spro_3448 -149 3.6 TTTTTTGATCTGAAGTGCCAAA
Proteus mirabilis HI4320 PMI1828 -275 4.4 TTTTGTGGTAGAGATCAAACTT
-115 3.6 TAACGTAACATGGCTTATATTA
Position: -187
Score: 3.9
Sequence: ATTTGTTAGTTTTATATCAAAT
Position: -46
Score: 4.2
Sequence: TGTTGTGATTACATTTAAATTT
Locus tag: bbp087
bbp087 -187 3.9 ATTTGTTAGTTTTATATCAAAT
-46 4.2 TGTTGTGATTACATTTAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: talA
Ortholog function: Transaldolase (EC 2.2.1.2)
Escherichia coli str. K-12 substr. MG1655 b2464 -83 4 TTTTTTGATGCGTTTAGCGAAA
-53 3.9 AAGTGTGAATTAACGCACTCAT
Salmonella typhimurium LT2 STM2473 -53 3.7 AAGTGTGAATCAACACACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02798 -80 3.7 TTTGGTTATGTACCTCATCAAT
Enterobacter sp. 638 Ent638_2959 -152 3.6 ATTTGTTATCAATTTATAACAA
-83 3.9 TTTTGTTAAGTACGTCATGTAT
Position: -52
Score: 3.6
Sequence: ATATATTATAGTGATCGTAATT
Locus tag: bbp088
bbp088 -52 3.6 ATATATTATAGTGATCGTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tktB
Ortholog function: Transketolase (EC 2.2.1.1)
Escherichia coli str. K-12 substr. MG1655 b2465 -83 4 TTTTTTGATGCGTTTAGCGAAA
-53 3.9 AAGTGTGAATTAACGCACTCAT
Salmonella typhimurium LT2 STM2474 -53 3.7 AAGTGTGAATCAACACACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02799 -80 3.7 TTTGGTTATGTACCTCATCAAT
Enterobacter sp. 638 Ent638_2960 -152 3.6 ATTTGTTATCAATTTATAACAA
-83 3.9 TTTTGTTAAGTACGTCATGTAT
Position: -90
Score: 3.8
Sequence: ATTAATTATCTAATTCATATTA
Locus tag: bbp101
bbp101 -90 3.8 ATTAATTATCTAATTCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: hypothetical protein
Enterobacter sp. 638 Ent638_2642 -116 4 CAGTGTGACATAGATCAGCAAA
Yersinia pestis KIM y2629 -78 3.8 AGTTGTGCTATCTATCGCACCA
-76 3.6 TTGTGCTATCTATCGCACCAAT
Serratia proteamaculans 568 Spro_1608 -297 3.7 ATGCTTGAAGTGGCTCTCACTT
-72 4.2 ACATGTGTGCCACATCACAAAA
Proteus mirabilis HI4320 PMI0655 -71 4.7 CTATGTGATCAGGTTAACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1560 -74 4.4 ACATGTGATCACATTAACAAAT
Position: -21
Score: 3.6
Sequence: TTTTTTGAGGTGTAATAAATAA
Locus tag: bbp165
bbp165 -21 3.6 TTTTTTGAGGTGTAATAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pta
Ortholog function: phosphate acetyltransferase
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02688 -95 3.8 AGGCATGATGTTAATCATAAAT
Enterobacter sp. 638 Ent638_2841 -96 3.8 TGGCATGATGTTAATCATAAAT
Serratia proteamaculans 568 Spro_3317 -125 3.8 TCACATGATGTTAATCATAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3040 -95 4.2 AGGTATGATGTTAATCATAAAT
Proteus mirabilis HI4320 PMI1772 -123 3.6 AAGCATGATGCGTATCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3096 -121 3.6 TAGCATGATGTTAATCATTTAA
Position: -4
Score: 3.6
Sequence: TTATATGAATGATATTATAAAA
Locus tag: bbp176
bbp176 -4 3.6 TTATATGAATGATATTATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1654 -132 3.6 ATATTTGAAATGCAACAAATAG
Enterobacter sp. 638 Ent638_1793 -186 3.6 TGAAGCGCTTTTGCTCACACTA
Erwinia amylovora ATCC 49946 EAM_1665 -145 3.9 AAATGTTATTTTGTTATCATCT
Proteus mirabilis HI4320 PMI1394 -292 3.6 TAATGTGCATTTATACACTTAT
Position: -174
Score: 3.7
Sequence: ATTATTGATATGTATTTCACAT
Position: -172
Score: 3.9
Sequence: TATTGATATGTATTTCACATGT
Position: -135
Score: 3.6
Sequence: AATTTTACTATAAATCAAATAG
Locus tag: bbp178
bbp178 -174 3.7 ATTATTGATATGTATTTCACAT
-172 3.9 TATTGATATGTATTTCACATGT
-135 3.6 AATTTTACTATAAATCAAATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Escherichia coli str. K-12 substr. MG1655 b3908 -161 3.8 GTGGGTGATTTGCTTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_03093 -150 4.4 ACGGGTGATTTGGCTCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -150 4 TTAGTTGTTCTACATCACAAAA
Enterobacter sp. 638 Ent638_4063 -160 3.6 CCGCGTGAGCAGACTCACAATT
Proteus mirabilis HI4320 PMI3036 -292 3.7 TTTTGCGCATAAGATCACGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -297 3.7 TTTTGCGCGGAAGATCACGCAA
Position: -320
Score: 3.2
Sequence: TATTATGATTGTTTTTTAAAAC
Position: -238
Score: 3.1
Sequence: ATTTTTAATGAATGTAAATTTT
Position: -203
Score: 3.6
Sequence: TAGATTAATGTTATTAACATTT
Position: -198
Score: 3.2
Sequence: TAATGTTATTAACATTTTGAAT
Position: -167
Score: 3.2
Sequence: TAATGTTAAAATTATTTAATTA
Position: -136
Score: 3.1
Sequence: AATTTTGTTTTTTTACAATTAT
Position: -117
Score: 3.1
Sequence: TATTAATAATTTTTTCAAAAAT
Position: -97
Score: 3.1
Sequence: ATTTTTATAAAAGTTAACATTT
Position: -75
Score: 3.2
Sequence: AATATTAATAATTAGAACATTA
Locus tag: bbp189
bbp189 -320 3.2 TATTATGATTGTTTTTTAAAAC
-238 3.1 ATTTTTAATGAATGTAAATTTT
-203 3.6 TAGATTAATGTTATTAACATTT
-198 3.2 TAATGTTATTAACATTTTGAAT
-167 3.2 TAATGTTAAAATTATTTAATTA
-136 3.1 AATTTTGTTTTTTTACAATTAT
-117 3.1 TATTAATAATTTTTTCAAAAAT
-97 3.1 ATTTTTATAAAAGTTAACATTT
-75 3.2 AATATTAATAATTAGAACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -113
Score: 4.1
Sequence: TTTTGTGATATTAATAACTCTC
Position: -36
Score: 3.3
Sequence: TGTTTTGAATTTAATAATCTTT
Position: -21
Score: 3.5
Sequence: AATCTTTATATAGGTAAAAAAA
Locus tag: bbp191
bbp191 -113 4.1 TTTTGTGATATTAATAACTCTC
-36 3.3 TGTTTTGAATTTAATAATCTTT
-21 3.5 AATCTTTATATAGGTAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Escherichia coli str. K-12 substr. MG1655 b0116 -224 3.3 AATTGTTAACAATTTTGTAAAA
Salmonella typhimurium LT2 STM0154 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
Citrobacter koseri ATCC BAA-895 CKO_03256 -95 3.3 AATTGTTAACAATTTTGTAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00120 -105 3.3 AATTGTTAACAATTTTGTAAAA
Yersinia pestis KIM y0769 -253 3.3 ATTGGTGATCTTGTTATTACTG
Serratia proteamaculans 568 Spro_4009 -246 3.6 TATGGTGATGTAATGAAAAAAG
Proteus mirabilis HI4320 PMI2044 -133 3.4 GGTTGTGAGATCTGTCATGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu3621 -131 3.9 TGTTGCGAGTTCTGTCACGTTA
Position: -237
Score: 3.8
Sequence: AATTTTTATATTTATAAAACAT
Locus tag: bbp248
bbp248 -237 3.8 AATTTTTATATTTATAAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ychE
Ortholog function: putative channel protein
Escherichia coli str. K-12 substr. MG1655 b1242 -257 5.1 TTACGTGATCCAAATCAAATTT
Salmonella typhimurium LT2 STM1748 -256 4.8 TTGTGTGATCTAAATCAAGATT
Citrobacter koseri ATCC BAA-895 CKO_01319 -167 5 TTGCGTGATCCAGATCAAATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02198 -261 4.8 TTACGTGATTTAGATCAAGTAT
Enterobacter sp. 638 Ent638_2303 -256 4 AAACATGATCTGAATCAATTTA
Erwinia amylovora ATCC 49946 EAM_1899 -158 3.8 AAAGATGATGCAGATCATCAAT
Serratia proteamaculans 568 Spro_2703 -268 5.2 TTTTGTGATTTAAATCATAAAA
Proteus mirabilis HI4320 PMI1485 -290 5.3 TAAAGTGATCTACATCACAATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2495 -295 4.9 TATATTGATCTTAATCACATAA
Position: -82
Score: 3.5
Sequence: AATTTTGTTTGAAATTAAAATA
Locus tag: bbp249
bbp249 -82 3.5 AATTTTGTTTGAAATTAAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lipB
Ortholog function: Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
Escherichia coli str. K-12 substr. MG1655 b0630 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0635.S -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02528 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00662 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1165 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1173 -146 4.2 TATTGTGATTAATCTTATATTG
Position: -51
Score: 3.6
Sequence: ATTACTAATTTATTTAACATTT
Locus tag: bbp298
bbp298 -51 3.6 ATTACTAATTTATTTAACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: zwf
Ortholog function: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b1852 -208 3.9 TAACATGATCAGTGTCAGATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02367 -225 3.8 TTACATGATCAGGGTCGTATTT
Yersinia pestis KIM y2244 -231 4.1 TAATATGACCTGTGTCTAATTT
Proteus mirabilis HI4320 PMI1157 -225 3.7 AAGTATGACCTGTGTCTAACTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2122 -234 4.2 TAATTTAATGTTTTTCATAAAA
Position: -60
Score: 3.8
Sequence: TATTTTAAGTTTTATCATAAAA
Locus tag: bbp371
bbp371 -60 3.8 TATTTTAAGTTTTATCATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiA
Ortholog function: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03349 -82 3.9 TTGTGTGATCTGCATCGCAGGG
Enterobacter sp. 638 Ent638_3333 -47 3.8 TAATGTGACACCGGTCACAGGG
Yersinia pestis KIM y3302 -114 4.2 AACTGTGATCTCGCTAGAATTA
Edwardsiella tarda EIB202 ETAE_2950 -276 4 TTTTGTTATGTATAAAACGTTA
Proteus mirabilis HI4320 PMI2032 -96 3.8 TAAAATGTTGTGTCTCAAATTT
Position: -37
Score: 4.3
Sequence: AATTGTGATAAATAAAAAATTT
Locus tag: bbp415
bbp415 -37 4.3 AATTGTGATAAATAAAAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoC
Ortholog function: cytochrome o ubiquinol oxidase subunit III
Escherichia coli str. K-12 substr. MG1655 b0430 -245 3.8 ATAATTGTTTTATTTCACATTG
Erwinia amylovora ATCC 49946 EAM_0983 -134 4 AGTTGTGACAGCGTTTGCAAAA
Yersinia pestis KIM y1019 -137 4.5 ATCTGTGACCCCCTTAACATAA
Serratia proteamaculans 568 Spro_1088 -135 4.2 ATCTGTGACCCCCTTAACAGAA
Proteus mirabilis HI4320 PMI0106 -194 3.6 AAATTATAGTTAATTCACAATA
-147 3.6 TTAATTACTTGTGATCACATTA
-141 4.3 ACTTGTGATCACATTAACACAA
Position: -144
Score: 3.8
Sequence: ATTTTTAAAATTTATCAAAAAA
Locus tag: bbp432
bbp432 -144 3.8 ATTTTTAAAATTTATCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybeD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0631 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0636 -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02527 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00663 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1166 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1174 -146 4.2 TATTGTGATTAATCTTATATTG
Position: -209
Score: 3.7
Sequence: AAATTTTATTTTTTTTACGAAA
Locus tag: bbp433
bbp433 -209 3.7 AAATTTTATTTTTTTTACGAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspE
Ortholog function: cold shock protein E
Escherichia coli str. K-12 substr. MG1655 b0623 -114 4 TAACGCGACTTTTATCACTTTT
Salmonella typhimurium LT2 STM0629 -114 4.3 TAACGCGATATTTATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_02534 -21 4.3 TAACGCGATATTTATCACTTTT
Enterobacter sp. 638 Ent638_1159 -114 3.8 TAACGCGACTTTTGTCACTTTT
Erwinia amylovora ATCC 49946 EAM_1116 -113 3.6 AAAAACGATATTTATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1294 -113 3.9 TTTAGCGACTTTTATCACTTTT
Position: -77
Score: 3.8
Sequence: AATTTTTATTTTCGTAAAATTT
Position: -39
Score: 4.2
Sequence: AATTGTGAATTGTAATACAAAA
Locus tag: bbp518
bbp518 -77 3.8 AATTTTTATTTTCGTAAAATTT
-39 4.2 AATTGTGAATTGTAATACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Salmonella typhimurium LT2 STM4221 -61 3.7 TTCTGTGACTGGCGTTACAATC
Citrobacter koseri ATCC BAA-895 CKO_03893 -61 4.1 TTTTGTGACTGGCGTTACAATC
Serratia proteamaculans 568 Spro_4477 -80 3.7 AAAAGAGATCATAATCACAGTC
Proteus mirabilis HI4320 PMI2754 -245 3.7 CAGTGAGATGTTAAACACAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4379 -205 3.8 TGACGCGATGAGAATCATAAAA