Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NagC regulog to Xenorhabdus bovienii SS-2004

Reference regulog properties
Source regulog: NagC - Enterobacteriales
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor (activator)
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Xenorhabdus bovienii SS-2004
Orthologous TF(s) XBJ1_3177
Regulated genes 3
Built upon 68 sites [see more]
Predicted regulatory interactions in Xenorhabdus bovienii SS-2004
Locus tag Position Score Sequence
Position: -85
Score: 4.7
Sequence: GCTTTTTTGCATTGCGAAATATG
Locus tag: XBJ1_0020
XBJ1_0020 -85 4.7 GCTTTTTTGCATTGCGAAATATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glmU
Ortholog function: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
Escherichia coli str. K-12 substr. MG1655 b3730 -233 4.8 GTTTATTCATTGATCGAAATAAG
Salmonella typhimurium LT2 STM3862 -233 4.8 CTTTATTTATGGAGTAAAAAAAC
Citrobacter koseri ATCC BAA-895 CKO_00067 -233 4.8 CTTTATTCATGGGTCAAAAAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04135 -248 4.7 CTTTATTCAGGTGGCGAAAAAAC
Enterobacter sp. 638 Ent638_4135 -233 5.2 CTTTATTCATGAGGCGAAAAAAT
Yersinia pestis KIM y4133 -235 4.8 CTTGTTTTCTGTCGTAAAATAAG
Serratia proteamaculans 568 Spro_0010 -242 5 CTTTTTTTTTGTTTTAAAATAAG
Proteus mirabilis HI4320 PMI3066 -84 5.3 AATATTTTGTGTAACGAAATATG
Photorhabdus luminescens subsp. laumondii TTO1 plu0038 -85 4.7 GCTTTTTTGTATTGCGAAATATG
Position: -125
Score: 6
Sequence: TTTAATTTGCGATACAAAATAAT
Locus tag: XBJ1_3174
XBJ1_3174 -125 6 TTTAATTTGCGATACAAAATAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagE
Ortholog function: PTS system, N-acetylglucosamine-specific IIABC component
Enterobacter sp. 638 Ent638_1194 -132 6 TTTAATTTGCGATACGAATTAAT
Yersinia pestis KIM y1203 -270 5.2 ATTTTTTCGGATGATAAAATAAG
-176 6 TTTAATTTGCGTTACGAAATAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1327 -172 5.7 TTTAATTTGTGTAGCGAATTATT
Edwardsiella tarda EIB202 ETAE_2616 -127 5.6 TTTAATTTGCGGAGAAAAATAAT
Proteus mirabilis HI4320 PMI0455 -120 6.1 ATTAATTTGCGATACAAAATAAT
Position: -230
Score: 6
Sequence: ATTATTTTGTATCGCAAATTAAA
Locus tag: XBJ1_3175
XBJ1_3175 -230 6 ATTATTTTGTATCGCAAATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -209 5.9 TTTAATTCGTATCGCAAATTAAA
-115 4.6 CTTATTTTATCATTCAAAAAATC
Salmonella typhimurium LT2 STM0684 -202 5.8 ATTAATTCGCCTCGCAAATTAAA
-108 4.8 CTTATTTTATGATTCAAAAAATC
Citrobacter koseri ATCC BAA-895 CKO_02486 -215 6 ATTAATTCGTATCGCAAATTAAA
-121 4.6 CTTATTTTATCATTCAAAAAATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -214 6 ATTAATTCGTATCGCAAATTAAA
-120 4.6 CTTATTTTATCATTCAAAAAATC
Enterobacter sp. 638 Ent638_1193 -215 6 ATTAATTCGTATCGCAAATTAAA
-121 4.6 CTTATTTTATCATTCAAAAAATC
Erwinia amylovora ATCC 49946 EAM_1147 -225 5.4 ATAAATTCGTACAGCAAATTAAT
-131 4.8 CTTATTTTATGATTCAAAAAATC
Yersinia pestis KIM y1202 -245 6 ATTATTTCGTAACGCAAATTAAA
-151 5.2 CTTATTTTATCATCCGAAAAAAT
Serratia proteamaculans 568 Spro_1227 -225 6 ATTATTTCGTATCGCAAATTAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -211 5.7 AATAATTCGCTACACAAATTAAA
-118 4.6 CTTATTTCAAGATTAAAAAAAAC
Edwardsiella tarda EIB202 ETAE_2617 -221 5.6 ATTATTTTTCTCCGCAAATTAAA
-127 4.6 CTTATTTTATCATTCGAAAAATC
Proteus mirabilis HI4320 PMI0454 -248 6.1 ATTATTTTGTATCGCAAATTAAT
-154 4.8 CTTATTTTATGATTAAAAATATC
Photorhabdus luminescens subsp. laumondii TTO1 plu1317 -232 5 TTTATTTTTCTTGCAAAAATAAG
-138 4.7 CTTATTTTAATATAAAAAATATC
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