Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Erwinia tasmaniensis Et1/99

Reference regulog properties
Source regulog: Fur - Enterobacteriales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Erwinia tasmaniensis Et1/99
Orthologous TF(s) ETA_23260
Regulated genes 25
Built upon 656 sites [see more]
Predicted regulatory interactions in Erwinia tasmaniensis Et1/99
Locus tag Position Score Sequence
Position: -37
Score: 5.7
Sequence: GATAATAATAATCATTTTC
Locus tag: ETA_04660
ETA_04660 -37 5.7 GATAATAATAATCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_2941
Ortholog function: Fe3+-hydroxamate ABC transporter, periplasmic component
Erwinia amylovora ATCC 49946 EAM_2941 -41 4.1 GAAACTGATAATAATAATC
-35 5.5 GATAATAATAATCATTTTC
-29 4.1 AATAATCATTTTCTTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3246 -51 5 AATAATGATAACTATTATC
Position: -204
Score: 4.1
Sequence: CTTAATAAGAATGGTTATC
Position: -198
Score: 3.7
Sequence: AAGAATGGTTATCAGACTT
Position: -192
Score: 3.7
Sequence: GGTTATCAGACTTATTTAA
Position: -153
Score: 3.3
Sequence: AAATAATGGAATGATTATC
Position: -147
Score: 4.7
Sequence: TGGAATGATTATCAATAAC
Position: -85
Score: 3.9
Sequence: ATTAATCATGTTTATTTGC
Locus tag: ETA_04670
ETA_04670 -204 4.1 CTTAATAAGAATGGTTATC
-198 3.7 AAGAATGGTTATCAGACTT
-192 3.7 GGTTATCAGACTTATTTAA
-153 3.3 AAATAATGGAATGATTATC
-147 4.7 TGGAATGATTATCAATAAC
-85 3.9 ATTAATCATGTTTATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ftnA
Ortholog function: ferritin
Escherichia coli str. K-12 substr. MG1655 b1905 -127 3.4 GgTAATGcgttTtATTccC
-121 3 GcgttTtATtccCATTcgt
Salmonella typhimurium LT2 STM1935 -100 4 AATAATTAAATTTAATATT
Citrobacter koseri ATCC BAA-895 CKO_01042 -97 4.3 AATAATTAAATTTATTATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02402 -161 4 ATAAATTAAAAGCATTCTC
-155 3.8 TAAAAGCATTCTCATTTAT
Enterobacter sp. 638 Ent638_2486 -103 3.7 TATTTTAATAAATAATATC
-97 3.6 AATAAATAATATCTTTATT
Erwinia amylovora ATCC 49946 EAM_2940 -131 4.4 TGGAATGATTATCAATTAC
Yersinia pestis KIM y2524 -93 4.4 AATAATGTGAATGATTATC
-87 4.1 GTGAATGATTATCATGATG
Serratia proteamaculans 568 Spro_1942 -174 4.5 GAAAATAGTTATCATAATT
-168 4 AGTTATCATAATTATTTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2473 -158 4.6 TTAAATGATAATGAATATC
-152 4.8 GATAATGAATATCAATAGC
Proteus mirabilis HI4320 PMI1007 -184 4.7 GTTAATGATAATCAATTCC
-178 4.1 GATAATCAATTCCATTAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2689 -147 4.4 TTAAATGAGATTCATTTTC
-141 4.4 GAGATTCATTTTCATTTTT
Position: -143
Score: 4.3
Sequence: TTGAATGATTCTCAATTAC
Locus tag: ETA_04680
ETA_04680 -143 4.3 TTGAATGATTCTCAATTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02848
Ortholog function: TonB-dependent siderophore receptor
Citrobacter koseri ATCC BAA-895 CKO_02848 -175 4.1 TTGAATGATTCTCAATTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02105 -210 4.1 TTGAATGATTCTCAATTAC
Enterobacter sp. 638 Ent638_3442 -118 4.1 TTGAATGATTCTCAATTAC
Yersinia pestis KIM y3343 -41 4.2 ACAAACGATTTTGATTATC
-35 4.6 GATTTTGATTATCATTCGC
Serratia proteamaculans 568 Spro_1016 -52 4.3 GCTAATGAGAGTGATTATC
Position: -226
Score: 4.6
Sequence: ATGAATGATAATGATTACC
Position: -220
Score: 5.3
Sequence: GATAATGATTACCAATATC
Position: -203
Score: 4.9
Sequence: TCATATGATAATCATTATC
Position: -197
Score: 5.2
Sequence: GATAATCATTATCATTTTG
Locus tag: ETA_06040
ETA_06040 -226 4.6 ATGAATGATAATGATTACC
-220 5.3 GATAATGATTACCAATATC
-203 4.9 TCATATGATAATCATTATC
-197 5.2 GATAATCATTATCATTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmsT
Ortholog function: diguanylate cyclase, involved in hemin storage
Salmonella typhimurium LT2 STM4551 -238 4 GGAATTGATAATGATAACC
-232 5.1 GATAATGATAACCAATATC
Citrobacter koseri ATCC BAA-895 CKO_03428 -234 4.8 GATAATGATAACCAATAGC
Enterobacter sp. 638 Ent638_0528 -237 5.1 GATAATGATAACCAATATC
Erwinia amylovora ATCC 49946 EAM_0564 -224 4.5 ATAAATGATAATGATTACC
-218 4.8 GATAATGATTACCAATAGC
-201 4.3 GCATATGTTAATCATTATC
-195 4.4 GTTAATCATTATCACTTTG
Yersinia pestis KIM y3756 -275 5 gataatgataatcataacc
-269 4.9 gataatcataaccaatatc
Serratia proteamaculans 568 Spro_0645 -243 4.6 GATAATGAGAACTAATATC
Position: -64
Score: 5.1
Sequence: CAAAATGATAATGATTATC
Position: -58
Score: 4.8
Sequence: GATAATGATTATCATATGA
Position: -41
Score: 5.3
Sequence: GATATTGGTAATCATTATC
Position: -35
Score: 5
Sequence: GGTAATCATTATCATTCAT
Locus tag: ETA_06050
ETA_06050 -64 5.1 CAAAATGATAATGATTATC
-58 4.8 GATAATGATTATCATATGA
-41 5.3 GATATTGGTAATCATTATC
-35 5 GGTAATCATTATCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjZ
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b4567 -60 4.4 GCAAATGATAAAAATTATC
-37 5.2 GATATTGGTTATCATTATC
Salmonella typhimurium LT2 STM4552 -37 5.2 GATATTGGTTATCATTATC
-31 4.2 GGTTATCATTATCAATTCC
Citrobacter koseri ATCC BAA-895 CKO_03427 2 4.9 GCTATTGGTTATCATTATC
8 4.1 GGTTATCATTATCGGTATC
Enterobacter sp. 638 Ent638_0529 -37 5.2 GATATTGGTTATCATTATC
-31 4 GGTTATCATTATCATATTG
Erwinia amylovora ATCC 49946 EAM_0565 -70 4.3 CAAAGTGATAATGATTAAC
-64 4.3 GATAATGATTAACATATGC
-47 4.9 GCTATTGGTAATCATTATC
-41 4.8 GGTAATCATTATCATTTAT
Yersinia pestis KIM y3754 -4 4.9 GATATTGGTTATGATTATC
2 5.2 GGTTATGATTATCATTATC
Serratia proteamaculans 568 Spro_0646 -39 4.7 GATATTAGTTCTCATTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0738 -89 5 GATATTAGTTATCATTATC
-83 4.5 AGTTATCATTATCATTTTT
Proteus mirabilis HI4320 PMI2497 -27 5.3 AATAATGAAAATCATTATC
-21 5.2 GAAAATCATTATCATTAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4253 -92 5.2 GATATTGGTAATCATTATC
-86 4.7 GGTAATCATTATCATTTGT
Position: -61
Score: 4.2
Sequence: CGTTATAAGAATAATTATC
Locus tag: ETA_08750
ETA_08750 -61 4.2 CGTTATAAGAATAATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhuA
Ortholog function: TonB-dependent siderophore receptor
Escherichia coli str. K-12 substr. MG1655 b0150 -57 4.4 CTTTATAATAATCATTCTC
-51 4.5 AATAATCATTCTCGTTTAC
Salmonella typhimurium LT2 STM0191 -56 4.8 GGTTATAATAATAATTATC
-50 4.8 AATAATAATTATCGTTTAC
Citrobacter koseri ATCC BAA-895 CKO_03218 -57 4 GGTCATAAGAATAATTCTC
-51 4.3 AAGAATAATTCTCGTTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00165 -56 4 CGTCATAATAATAATTCTC
-50 4.5 AATAATAATTCTCGTTTAC
Enterobacter sp. 638 Ent638_0690 -58 4.3 GGTCATAATAATAATTCTC
-52 4.5 AATAATAATTCTCGTTTAC
Position: -61
Score: 4.7
Sequence: GATAAGTATTATCATTTGC
Locus tag: ETA_12810
ETA_12810 -61 4.7 GATAAGTATTATCATTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuB
Ortholog function: ferric-enterobactin ABC-transporter, permease component
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00519 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0575 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2216 -61 4.5 GATAAGTATTATCATTTGC
-10 4 GGTATTGATAATGAGTTTA
Yersinia pestis KIM y2874 -45 4.3 CTTATTGATAAGTATTATC
-39 4.5 GATAAGTATTATCATTTGC
Serratia proteamaculans 568 Spro_3222 -108 4.2 ATGATTGATAAGTATTATC
-102 4.2 GATAAGTATTATCGTTTGC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3242 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Edwardsiella tarda EIB202 ETAE_1965 -75 4.7 GCTAATAATTTTCATTTAC
-53 4.5 AATATTGATATTGATTAGC
-47 4.8 GATATTGATTAGCGTTATC
Proteus mirabilis HI4320 PMI0229 -96 4.8 GATAATGGTAACTATTATC
-90 4.3 GGTAACTATTATCGTTATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2852 -78 4.3 CATATTGATAAGTATTCTC
-72 4 GATAAGTATTCTCATTTGT
Position: -48
Score: 4.6
Sequence: AAGAATGATAATATTTATC
Position: -42
Score: 4.2
Sequence: GATAATATTTATCATCAAC
Locus tag: ETA_13950
ETA_13950 -48 4.6 AAGAATGATAATATTTATC
-42 4.2 GATAATATTTATCATCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yiuA
Ortholog function: siderophore ABC transporter, substrate binding periplasmic protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00520 -54 4.1 GAGAATAATTCTCAGAATC
Enterobacter sp. 638 Ent638_0573 -131 4.4 TCAATTGATAAGCATTATC
Erwinia amylovora ATCC 49946 EAM_2096 -48 4.5 AAGAATGATAATATTTATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3241 -77 4.2 ATATACGATAATAATTATC
-71 4.7 GATAATAATTATCAAACTC
Position: -51
Score: 5.1
Sequence: GACAATGATAACCATTATC
Locus tag: ETA_13980
ETA_13980 -51 5.1 GACAATGATAACCATTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ubiF
Ortholog function: flavoprotein monooxygenase
Erwinia amylovora ATCC 49946 EAM_2094 -51 4.9 GGTAATGATAACCATTAGC
Serratia proteamaculans 568 Spro_1429 -74 5.5 GATATTGATAATCATTATC
-68 5.1 GATAATCATTATCAATATT
Position: -80
Score: 4.8
Sequence: GATAATGATAATCCATATC
Locus tag: ETA_14320
ETA_14320 -80 4.8 GATAATGATAATCCATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yijD
Ortholog function: iron permease FTR1
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01045 -76 5 TGTAATGATAATCACTATC
-70 4.2 GATAATCACTATCATAAAT
Enterobacter sp. 638 Ent638_1545 -76 4.9 CGTAATGATAATCACTATC
Erwinia amylovora ATCC 49946 EAM_2059 -80 4.6 GATAATGATAATCCCTATC
Yersinia pestis KIM y2452 -84 4.4 CAGAATGATAATCACAATC
-78 4.3 GATAATCACAATCGTTTTA
Serratia proteamaculans 568 Spro_2929 -109 4.8 CAGAATGATAATCACTATC
Position: -197
Score: 4.7
Sequence: CGGAATAATAATCATTCTC
Position: -191
Score: 4.5
Sequence: AATAATCATTCTCAATACT
Locus tag: ETA_16360
ETA_16360 -197 4.7 CGGAATAATAATCATTCTC
-191 4.5 AATAATCATTCTCAATACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sapA
Ortholog function: ABC peptide transport periplasmic protein
Erwinia amylovora ATCC 49946 EAM_1842 -198 5.1 GTTAATAATAATCATTCTC
-192 5.2 AATAATCATTCTCATTATC
Edwardsiella tarda EIB202 ETAE_1870 -222 4.1 TTGAATGATAATGTTTATC
-216 4.8 GATAATGTTTATCAATATC
Proteus mirabilis HI4320 PMI1378 -131 4.7 GATAATCTTTATCATTAGC
Photorhabdus luminescens subsp. laumondii TTO1 plu2587 -141 4 ACAGATGATAATGGTTATC
-135 4.3 GATAATGGTTATCAATACG
Position: -140
Score: 5
Sequence: ATTATTGATAATGATTATC
Position: -134
Score: 5.4
Sequence: GATAATGATTATCATTTGT
Locus tag: ETA_17360
ETA_17360 -140 5 ATTATTGATAATGATTATC
-134 5.4 GATAATGATTATCATTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuR
Ortholog function: TonB-dependent outer membrane receptor
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03087 -133 4 GATAATACCTATCATTACC
Erwinia amylovora ATCC 49946 EAM_1726 -140 4.2 TTTGTTGATAATGATTATC
-134 5.1 GATAATGATTATCATTTGT
Position: -321
Score: 4.3
Sequence: GATAATATTTATCAATAAA
Locus tag: ETA_18200
ETA_18200 -321 4.3 GATAATATTTATCAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sufA
Ortholog function: scaffold protein for iron-sulfur cluster assembly
Escherichia coli str. K-12 substr. MG1655 b1684 -65 4.4 TGAACTGATAATCATTATC
-59 5.1 GATAATCATTATCACTAAC
Salmonella typhimurium LT2 STM1369 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Citrobacter koseri ATCC BAA-895 CKO_01717 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02141 -66 4.7 TGAAGTGATAATCATTATC
-60 5.1 GATAATCATTATCACTAAC
Enterobacter sp. 638 Ent638_1760 -67 4.4 TGAAGTGATAATCGTTATC
-61 4.7 GATAATCGTTATCACTAAC
Yersinia pestis KIM y1934 -129 4.5 TGAAGTGATAATTATTATC
-123 4.8 GATAATTATTATCACTACC
Serratia proteamaculans 568 Spro_2179 -77 4.4 TGAAGTGATAATCGTTATC
-71 4.7 GATAATCGTTATCACTAAC
Proteus mirabilis HI4320 PMI1416 -66 4.4 GATAAGGGTTATCATTACC
-60 4 GGTTATCATTACCATTAGA
Photorhabdus luminescens subsp. laumondii TTO1 plu2622 -87 4.4 GATAAAGGTTATCATTACC
-81 4.3 GGTTATCATTACCATTATA
Position: -41
Score: 4.9
Sequence: TAATATGATAATGATTATC
Position: -35
Score: 5.7
Sequence: GATAATGATTATCATTAGC
Locus tag: ETA_18210
ETA_18210 -41 4.9 TAATATGATAATGATTATC
-35 5.7 GATAATGATTATCATTAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: EAM_1649
Ortholog function: hypothetical protein
Erwinia amylovora ATCC 49946 EAM_1649 -41 4.7 TAATATGATAATGATTATC
-35 5.5 GATAATGATTATCATTAGC
-29 4 GATTATCATTAGCATAACC
Serratia proteamaculans 568 Spro_2178 24 4.8 AAATATGATAATGATTATC
30 5 GATAATGATTATCATTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1858 -43 4.7 TAATATGATAATGATTATC
-37 4.9 GATAATGATTATCATTTCA
Position: -66
Score: 4.3
Sequence: TTTGTTGATAATGATTATC
Position: -60
Score: 5.3
Sequence: GATAATGATTATCATTCTG
Position: -54
Score: 4
Sequence: GATTATCATTCTGAATATG
Locus tag: ETA_18270
ETA_18270 -66 4.3 TTTGTTGATAATGATTATC
-60 5.3 GATAATGATTATCATTCTG
-54 4 GATTATCATTCTGAATATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemS
Ortholog function: hemin transport protein
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03088 -133 4 GATAATACCTATCATTACC
Enterobacter sp. 638 Ent638_1740 -50 4.2 TTTGTTGATAATGATTATC
-44 5.1 GATAATGATTATCATTGTT
Erwinia amylovora ATCC 49946 EAM_1642 -65 4.2 TTTGTTGATAATGATTATC
-59 4.8 GATAATGATTATCATTCCA
Yersinia pestis KIM y0542 -48 3.7 GATAATGCTTATCACACTG
-30 4.1 GATAGTCGTTATCATTAAG
Serratia proteamaculans 568 Spro_2168 -68 4 TCACATGATAATGATTCTC
-62 4.6 GATAATGATTCTCACTTTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1846 -59 4.7 GAAAATGATTCTCATTCAT
Edwardsiella tarda EIB202 ETAE_1798 -10 4.1 TTATACGATAATGATTATC
-4 5.1 GATAATGATTATCATTAAG
Proteus mirabilis HI4320 PMI1427 -52 5.1 GATAACGATAATGATTATC
-46 5.4 GATAATGATTATCATAATC
-40 4.4 GATTATCATAATCATAACC
Photorhabdus luminescens subsp. laumondii TTO1 plu2633 -54 4.7 TATAACGATAATAATTCTC
-48 4.6 GATAATAATTCTCACTATG
Position: -176
Score: 4.3
Sequence: GAAAATAAAACGCATTATT
Locus tag: ETA_22050
ETA_22050 -176 4.3 GAAAATAAAACGCATTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: DNA protection ferritin-like protein
Salmonella typhimurium LT2 STM0831 -188 4.4 TAAAATGAGAATTATTACC
-136 4 TTTAATCAAAATAAATATT
Citrobacter koseri ATCC BAA-895 CKO_02310 -188 4.5 GTGAATGAGAATTATTAAC
-137 4.3 TTTAATCATTTTCAATATT
Enterobacter sp. 638 Ent638_1299 -118 4.1 TAACATTATTATCACTATT
Position: -123
Score: 4.5
Sequence: AAAAAAGATAATAATTCTC
Position: -117
Score: 5.2
Sequence: GATAATAATTCTCATTTAC
Locus tag: ETA_30310
ETA_30310 -123 4.5 AAAAAAGATAATAATTCTC
-117 5.2 GATAATAATTCTCATTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: foxA
Ortholog function: TonB-dependent siderophore receptor
Salmonella typhimurium LT2 STM0364 -26 4.5 GGTAATAATTCTTATTTAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02304 -98 4.2 AATAATAATTCGCATTACT
Enterobacter sp. 638 Ent638_0493 -45 4.7 GGTAATAATTCTTATTAAC
Erwinia amylovora ATCC 49946 EAM_0358 -123 4.4 AAAAAAGATAATAATTCTC
-117 5 GATAATAATTCTCATTTAC
Serratia proteamaculans 568 Spro_2736 -140 4.9 GATAAAGATAATAATTATC
-134 5.2 GATAATAATTATCATTAAT
Position: -65
Score: 4.6
Sequence: TGAAATGAAAACCATTATC
Position: -59
Score: 4.7
Sequence: GAAAACCATTATCATTTAT
Locus tag: ETA_30330
ETA_30330 -65 4.6 TGAAATGAAAACCATTATC
-59 4.7 GAAAACCATTATCATTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fecI
Ortholog function: ECF-family RNA polymerase sigma factor fecI
Escherichia coli str. K-12 substr. MG1655 b4293 -63 4.7 TGTAATGATAACCATTCTC
-57 4.1 GATAACCATTCTCATATTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1079 -76 4.6 TGTAATGAGAACCATTATC
-70 4.1 GAGAACCATTATCATATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4444 -64 4.5 TGTAATGATAACTATTCTC
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